DY306098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 5.058e-83 Identity = 152/231 (65.80%), Postives = 185/231 (80.09%), Query Frame = 2 Query: 2 NYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDD---PSQGTIRSSPKMISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQ 685 NYRTRPQYPLMLWKPAAPVYPKLIQE PEGLTK EA E R KGKSL PICKL+KNGVY++LV+DVR+AFE SSLVKV+C G+ SDYKK+GAKLKELVPCVLLSFDDEQILMWRG++WKS + + P + + + + D S PS++ + T SSPKMISLW+RA+ES+KA++L+E++LGPDDLLKKVEE EG S AAEH+Y A+VLS DGA+ + +D S+ Sbjct: 291 NYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSE 521
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 2.604e-71 Identity = 135/234 (57.69%), Postives = 176/234 (75.21%), Query Frame = 2 Query: 2 NYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEYED 676 N RTRP+YPLMLWKPA PVYPKLIQEAPEGLTK EADE+RR+GK LLPICKLAKNG+Y+ LVRDVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFD+EQILM+RGK+WKS YP+P + + ++ ++ D S +DD + +R PKM LW AIES+ AL+LD+ L PD LL +VE+F SQ EHS+PA++++ ++ + AEY + Sbjct: 318 NPRTRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEADEMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMFRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTNAIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEYTE 551
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 4.441e-71 Identity = 138/230 (60.00%), Postives = 175/230 (76.09%), Query Frame = 2 Query: 8 RTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY 670 +TRP+YPLMLWKPA PVYPKLI+EAP+G TK EADE+RRKG+ LLPICKLAKNG+Y+TLV+DVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFDDEQILM RGK+WKS Y +P + V +L + + S SD +Q IR PKM LWK A++S+ AL+LD+ NL PD LL VEEF SQA EHS+PAL+++ D ++ S+ AEY Sbjct: 324 KTRPRYPLMLWKPATPVYPKLIKEAPDGFTKEEADEMRRKGRDLLPICKLAKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDASTDSLSAEY 553
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 3.424e-47 Identity = 89/167 (53.29%), Postives = 124/167 (74.25%), Query Frame = 2 Query: 2 NYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPP---SFSNPVDLDIAGDADGSGTPSDDPSQGTIRSSPKMISL 493 N+RTRP++PLMLWKP APVYP+LIQ+ PEGLT+ EA +RRKG+ L+PICKL KNGVY LV++V+ AFE LV+++C+GM SD++K+GAKLK+LVPCVL+SF++EQIL+WRG++WKS P +++D A D + S + SQ T+ +P + S+ Sbjct: 331 NHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPEDDEPSVSPNQSQ-TMTQNPPLDSM 496
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 2.454e-45 Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = 2 Query: 2 NYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP--EPPSFSNPVDLDIAGDADGSGT 436 NYRTRP YPLMLWKPAAPVYP+L+++ P+GLT EA+++R++G+ L PICKL KNGVYL LV+ VR AFE LV+V+C G++ SD +K+GAKLK+LVPC LLSF+ E ILMWRG DWKS P E F D + GSG+ Sbjct: 273 NYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLPPLEENDFKVASDQILNSKEAGSGS 419
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.539e-42 Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 2 Query: 2 NYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP 370 NYRTRP +PLMLWKP APVYP+L+ + P GLT EA E+R +G L PICKL KNGVY LV VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILMWRG DWKS P Sbjct: 273 NYRTRPCFPLMLWKPVAPVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLP 395
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.064e-32 Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 2 NYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDW 355 N + RP PLMLWKPA PVYP+LI+ EGLT E E+R+KG + + KLAKNG Y +LV VR+AF LV+++ KG+ SDY+K+G KL++LVPC+++SFD EQI++WRGKD+ Sbjct: 247 NPKKRPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY 364
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.017e-31 Identity = 66/139 (47.48%), Postives = 99/139 (71.22%), Query Frame = 2 Query: 8 RTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVDLDIAGDAD 424 + RP+ PLMLWKP PVYP+LI+ +GL+ E +R+KG ++ + KLAKNG Y +LV VR+AF S LV+++C G+ DYKK+GAKL++LVPC+L++FD EQ+++WRGKD+K E +S+ + + + D+D Sbjct: 251 KKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPP-KEDDEYSSFIHRESSIDSD 388
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 2.465e-29 Identity = 59/114 (51.75%), Postives = 82/114 (71.93%), Query Frame = 2 Query: 8 RTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 349 + RPQ PLMLWKP AP+YP+L+Q +GLT + ELR G + P+ KL +NGVY+ +V VR AF+ +V+++C + +SD KK+G KL++LVPCV L F DEQI++WRGK Sbjct: 237 KQRPQIPLMLWKPLAPIYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350
BLAST of DY306098 vs. ExPASy Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 7.423e-26 Identity = 53/114 (46.49%), Postives = 77/114 (67.54%), Query Frame = 2 Query: 8 RTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 349 ++RP PLMLWKP P+YP+L++ +GL E E+R +G + KL +NGVY+ +V VR FE +V+++C + SD K++G KLKE+VPCV + F DEQI++WRGK Sbjct: 235 KSRPIIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348 The following BLAST results are available for this feature:
BLAST of DY306098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306098 ID=DY306098; Name=DY306098; organism=Citrus sinensis; type=EST; length=1218bpback to top |