DY306092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBBA_ARATH (Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 9.293e-63 Identity = 147/272 (54.04%), Postives = 175/272 (64.34%), Query Frame = 3 Query: 186 NVNFVSGFPSTKSL----LANGHSSYLAFVKLATK------SSISIK-GVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPT-TXXXXXXXXXXXXXXPTEGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGGNSGKELGPTE 965 ++N S PST SL L+ ++ L + T S+ SIK GK +A +IS E DLL++ NGN ++ + DD+ L+ D+++ G LAAD+AP PT GFSSIPEAIEDIRQGK L+MAAQLATPEAMAFIV+HGTGIVCVSMK +DLERL LPLMV QKEN+EKL TAFTVTVDAKHGTT GVSARDRA T+L+LAS+DSKP DFNR G IFPLKY +GG K G TE Sbjct: 3 SINLSSSSPSTISLSRSRLSQSSTTLLHGLHRVTLPSNHPLSTFSIKTNTGKVKAAVISREDDLLSFTNGNTPLSNGSLIDDRTEE-PLEADSVSLGTLAADSAPAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVL-KRAGHTE 272
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBB_NEIMB (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Neisseria meningitidis serogroup B GN=ribB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.004e-24 Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 3 Query: 531 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGG 935 S IPE + DI+ GK L+MAAQ TPEA+ F++KH G+VC+ M GE +E+L LP+M ++N + T FTV+++A HG T G+SA DRA T+ T S +KP D + G IFPL+ +KGG Sbjct: 5 SPIPEILADIKAGKMVIITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMT--QKNGAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKGG 137
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBB_NEIMA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Neisseria meningitidis serogroup A GN=ribB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.312e-24 Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 3 Query: 531 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGG 935 S IPE + DI+ GK L+MAAQ TPEA+ F++KH G+VC+ M GE +E+L LP+M ++N + T FTV+++A HG T G+SA DRA T+ T S +KP D + G IFPL+ +KGG Sbjct: 5 SPIPEILADIKVGKMVIITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMT--QKNGAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKGG 137
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBBA_AQUAE (Riboflavin biosynthesis protein ribBA OS=Aquifex aeolicus GN=ribBA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.985e-24 Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 528 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDA--KHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGG 935 F+++ EAIEDIRQGK L+MAA+ TPEA+ F+ K+G G++C+S+ E E+LDL M N + T F V++DA KHGTT G+SA DRA T+ S D+KP DF R G +FPLK GG Sbjct: 9 FNTVEEAIEDIRQGKMVIVVDDPDRENEGDLVMAAEKVTPEAINFMAKYGRGLICLSLTPERCEQLDLHPMTPM--NTDPKGTYFCVSIDAHPKHGTTTGISAYDRALTIKLAISPDAKPSDFVRPGHVFPLKARPGG 144
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBB_AGRT5 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ribB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.894e-23 Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 3 Query: 531 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGGNSGKELGPTE 965 + I +AIE I +G+ +I A+ TP+ +AF++ H G+VCV+M GE L+ LD+PLMV++ N E L TAFTV+VD GTT G+SA DRA TV L S+ S+P DF R G IFPL+ G G+ G TE Sbjct: 4 AKIEDAIEAISRGEMVIVVDDEDRENEGDIIAASDSITPQQIAFMMNHARGLVCVAMPGERLDALDIPLMVSR--NTESLKTAFTVSVDYIPGTTTGISAADRAKTVRALVSEGSRPEDFARPGHIFPLRANPEGVLGR-TGHTE 145
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNWW (Riboflavin biosynthesis protein ribBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.094e-22 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 528 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGG 935 FSSI E I+DI++GK +I+AA+ A PEA+ F+ H G++C+ + GE L+ L++ MV EN + TAFTVTVD + GTT G+SA +RA TV L SKP DF + G IFPL+Y +GG Sbjct: 2 FSSIEEVIQDIKEGKMIVLVDDEDRENEGDVIIAAEKAGPEAINFMATHAKGLICMPIIGERLDELEIHDMVT--ENTDNHETAFTVTVDYR-GTTTGISAFERAATVKALIDSVSKPSDFRKPGHIFPLRYREGG 134
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIB3_SCHPO (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Schizosaccharomyces pombe GN=SPBC23E6.06c PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.094e-22 Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 531 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKD-SKPGDFNRRGPIFPLKYEKGG 935 +SI EA+ D R GKF LI+A T E MAF+V+H +G VCV M GE L+ L++P+MV N++++ TA+ VT+D +GTT G+SA DRA T LA+ + + P +FNR G I PL+ GG Sbjct: 3 ASIEEAVNDFRDGKFLIVLDDETRENEGDLIIAGCKVTTEQMAFLVRHSSGYVCVPMTGERLDSLEIPMMV--DNNEDRMRTAYAVTLDYANGTTTGISAHDRALTTRQLANPEVTSPREFNRPGHIVPLRARDGG 136
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBBA_NOCFA (Riboflavin biosynthesis protein ribBA OS=Nocardia farcinica GN=ribBA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.735e-22 Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 528 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGG 935 F +I A+ DI GK LI AA+ ATPE +AF++++ +G +CV + GED +RL LP M A N +K TA+TV+VDA+ G T G+SA DRA T+ LA D+K D R G + PL+ + GG Sbjct: 4 FDTIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMIRYTSGYICVPLTGEDCDRLGLPPMYAT--NQDKHGTAYTVSVDAREGITTGISAADRATTMRLLADADAKADDLTRPGHVVPLRAKDGG 137
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLPN (Riboflavin biosynthesis protein ribBA OS=Chlamydia pneumoniae GN=ribBA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.735e-22 Identity = 66/147 (44.90%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 528 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGGNSGKELGPTET 968 F S+ AIED+R GKF LI+A + T E M F+++H TG+VC ++ E L LDLP MV K+N + T FTV+VDA HG T GVSA DR V LA SKP DF G FPL GG K G TE+ Sbjct: 13 FVSLERAIEDLRAGKFVIVVDEASREDEGDLIIAGEKITVEKMTFLLQHTTGVVCAALSQERLLSLDLPPMV--KDNRCRFKTPFTVSVDAAHGVTTGVSAADRTKVVQLLADPKSKPEDFISPGHFFPLASSPGGVL-KRAGHTES 156
BLAST of DY306092 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOE4 (Riboflavin biosynthesis protein ribBA OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ribBA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.958e-22 Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 528 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTPGVSARDRANTVLTLASKDSKPGDFNRRGPIFPLKYEKGG 935 F SI A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G+D +RL LP M A N +K TA+TVTVDA+ G G+SA DRA T+ LA+ +S DF R G + PL+ ++GG Sbjct: 4 FDSIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLDGDDCDRLGLPPMYAT--NQDKHGTAYTVTVDAREGIGTGISASDRAATMRLLANPESGANDFTRPGHVVPLRAKEGG 137 The following BLAST results are available for this feature:
BLAST of DY306092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306092 ID=DY306092; Name=DY306092; organism=Citrus sinensis; type=EST; length=1164bpback to top |