DY306088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306088 vs. ExPASy Swiss-Prot
Match: CSN7_ARATH (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 8.258e-72 Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 266 KAGSVARCFEVQFAAGRHLKPGQLGSMIQTLSNWLTTSDNLLISIQEKIKWADSMNEMDKKHRKDLEEKVEEAKKSLSHKADVDCRGHEEIYSEPGGVMDYEEDRGRPKR 595 K + RCFEV FAAGR L+PGQLG+M+ TLSNWL TS+NLLISIQ+KIKWAD+M+EMDKKHRK+ EE VEE KKSLS K DVD RG++E++ EP GVMDYEED RPKR Sbjct: 144 KLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNTSENLLISIQDKIKWADNMSEMDKKHRKEAEEGVEEVKKSLSMKGDVDIRGNKEMFGEPSGVMDYEEDGIRPKR 253 HSP 2 Score: 127.872 bits (320), Expect = 8.258e-72 Identity = 63/94 (67.02%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 3 GTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQXXXXXXXXXXXXAETNKVLPYDELMEELDVTNVQQLEDFLINECMYTGIERGKLDQLQ 284 GT +S YLD+LRLFAHGTW DYK NA LP L PDQ AE+NKVLPYD LM ELDV+NV++LEDFLINECMY GI RGKLDQL+ Sbjct: 56 GTTDSVYLDLLRLFAHGTWGDYKCNATRLPHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELDVSNVRELEDFLINECMYAGIVRGKLDQLK 149
BLAST of DY306088 vs. ExPASy Swiss-Prot
Match: CSN7_DICDI (COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum GN=csn7 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.756e-22 Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 6 TENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQXXXXXXXXXXXXAETNKVLPYDELMEELDVTNVQQLEDFLINECMYTGIERGKLDQ 278 TE Y D+L +FA+G++ DYKN LPQL P + T+ V+PY L E++++TNV++LED +I + +Y I +GKLDQ Sbjct: 60 TEFKNYYDLLLIFAYGSFIDYKNKKDSLPQLTPQMITKLKQLTIVFLSSTSNVIPYSVLQEQIEITNVRELEDLII-DSIYQNIIKGKLDQ 149 HSP 2 Score: 51.9878 bits (123), Expect = 1.756e-22 Identity = 30/95 (31.58%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 293 EVQFAAGRHLKPGQLGSMIQTLSNWLTTSDNLLISIQEKIKWADSMNEMDKKHRKDLEEKVEEAKKSLSHKADVDCRGHEEIYSEPGGVMDYEED 577 E+ F+ GR ++P QL SMI L+NW +TS LL I I +D ++ +K +++ E K E AK + + + E++Y + M+Y ++ Sbjct: 155 EIDFSIGRDVQPEQLDSMINCLNNWSSTSQKLLDDISGLITHSDKVHLQYRKEKEEFESKFEIAKLNTKNDSPA-----EQLYYDS---MEYSDE 241
BLAST of DY306088 vs. ExPASy Swiss-Prot
Match: CSN7_DROME (COP9 signalosome complex subunit 7 OS=Drosophila melanogaster GN=CSN7 PE=1 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 6.250e-14 Identity = 31/89 (34.83%), Postives = 46/89 (51.69%), Query Frame = 3 Query: 12 NSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQXXXXXXXXXXXXAETNKVLPYDELMEELDVTNVQQLEDFLINECMYTGIERGKLDQ 278 +SK+ + L LFA+GT+ +Y+ +L P A K +PY L+ EL++ NV+ LED +I E +Y I GKL Q Sbjct: 68 DSKHFETLNLFAYGTYKEYRAQPEKFIELTPAMQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLEDIII-EAIYADIIHGKLFQ 155 HSP 2 Score: 45.4394 bits (106), Expect = 6.250e-14 Identity = 24/79 (30.38%), Postives = 45/79 (56.96%), Query Frame = 2 Query: 284 RCFEVQFAAGRHLKPGQLGSMIQTLSNWLTTSDNLLISIQEKIKWADSMNEMDKKHRKDLEEKVEEAKKSL-SHKADVD 517 R EV +A GR + PG G +++TL W+ + D++ I+ +IK+A++ +++ +E+ + KK L S +D D Sbjct: 158 RILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIEMQIKYANAEKSKRLINKERVEQDLINLKKVLKSQTSDSD 236 The following BLAST results are available for this feature:
BLAST of DY306088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306088 ID=DY306088; Name=DY306088; organism=Citrus sinensis; type=EST; length=1241bpback to top |