EY702743

Overview
NameEY702743
Unique NameEY702743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP24_ARATH (Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana GN=UBP24 PE=1 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.524e-85
Identity = 161/228 (70.61%), Postives = 184/228 (80.70%), Query Frame = 2
Query:    8 SASINGANTALVSLAEED--EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFYNK 685
            S  +  + ++++S A +D  EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + V  IEDAL LFSA E+LEGYR S TG  GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKL K V+FPL+L L R  LV+ S E  +YELVAT+THHG DPSKGHYT DAR  N QWL FDDASVT IG   VLHDQAYVLFY +
Sbjct:  323 SPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBPB_DICDI (Ubiquitin hydrolase B OS=Dictyostelium discoideum GN=ubpB PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.577e-37
Identity = 90/211 (42.65%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   56 EDEWETVGPKNKSAV-TRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            +D WE VG K K+A+ T +Q  LP   +S IF G L+S     G+K S TV+PF  LHLDI  E ++++EDAL+ F  PE +EGY T ST     ++A KS   ++L +ILI+H  RF++ S  S KL K +RFP QL L      +     +KY L + V+HHGR  S+GHYT D  +    QW+ +DD++ T + +  VL+ +AY+L Y
Sbjct:  242 DDNWEVVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEEINSLEDALKFFMKPEIIEGY-TCSTKKI-EISASKSWSFESLPRILIVHFKRFAFESDTSKKLDKLIRFPTQLSLS---TASNHQTQKKYSLFSVVSHHGRGLSQGHYTCDIYQPQQAQWIRYDDSTFTEVKEQDVLNREAYLLLY 447          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP10_HUMAN (Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 86/222 (38.74%), Postives = 127/222 (57.21%), Query Frame = 2
Query:   56 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGDSKVL----HDQAYVLFYNK 685
            EDEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y   G   KL K++ +P+ L + ++LL +P  +       R Y L A V HHG   + GHYT D      + WL  DD +V  I   +V+       AY+L+Y +
Sbjct:  577 EDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRR 794          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP10_MOUSE (Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35
Identity = 86/222 (38.74%), Postives = 126/222 (56.76%), Query Frame = 2
Query:   56 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGDSKVLHD----QAYVLFYNK 685
            EDEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y   G   KL K++ +P+ L + R+LL +P  +       R Y L A V HHG   + GHYT D      + WL  DD +V  I   +V+       AY+L+Y +
Sbjct:  571 EDEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRR 788          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP3_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 3 OS=Schizosaccharomyces pombe GN=ubp3 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 81/235 (34.47%), Postives = 121/235 (51.49%), Query Frame = 2
Query:   44 SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAI--------------GDSKVLHDQ--AYVLFYNK 685
            S  E   W  VG   K  + R+ +   S +S IFGGQL+S ++    + S  ++PF  L LDI +E +H++ DAL   +APE L  + +S     G VTA K + I++L  +LILHL RF Y + G T K +K + +P +L + +++  +PS  G    +Y+L A V HHG   S GHYT D +  +   W   DD  +  +                SK+ H    AY+LFY +
Sbjct:  281 SSVEASGWTEVGKNKKPVIARSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAEDIHSVIDALEHMTAPEILPEWHSSK----GNVTATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSIPQNVF-SPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDVENSELSADPSLSKLGHGDRVAYLLFYTR 510          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP3_YEAST (Ubiquitin carboxyl-terminal hydrolase 3 OS=Saccharomyces cerevisiae GN=UBP3 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.444e-22
Identity = 77/250 (30.80%), Postives = 118/250 (47.20%), Query Frame = 2
Query:   53 EEDEWETV------GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNK--ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS---------------TKLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDDASVTAIGDSKVLHD--------QAYVLFYNK 685
            EE+ W  V      G K K+A  RT   +PS +S +FGGQ +SV+    NK   S T+ PF  + LDI    V+ +E A + FS  E L     SS+GN   V AKK   I  L ++L++   RFS+ +  +                K+ K +++  +L++  + +        T   + R+Y+L   + HHG     GHYTAD  +  +++W   DD ++T + D  VL           AY+L Y K
Sbjct:  665 EENGWHEVSGSSKRGKKTKTAAKRTVEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELLP--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP8_HUMAN (Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.141e-18
Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 2
Query:  125 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            S +  +F GQ KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +       + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P    +KY L +   H+G     GHYTA  +     +W  FDD  V+ I  S V    AY+LFY
Sbjct:  920 SIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP8_MOUSE (Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.229e-18
Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 2
Query:  125 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            S +  +F GQ KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +       + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P    +KY L +   H+G     GHYTA  +     +W  FDD  V+ I  S V    AY+LFY
Sbjct:  882 SIIVALFQGQFKSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP3_HUMAN (Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.887e-17
Identity = 76/245 (31.02%), Postives = 110/245 (44.90%), Query Frame = 2
Query:    2 HASASINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            H    + G    +   A   E  T+   NK  +    + + +    IFGG L++ V        S    PFL L LDI S+             V ++ D LR F+  E L+   T           +KS K   IQ L K+L LHL RF + +    K+   V FPL+ +  +  L+ P   G +   Y+L A V HHG     GHYTA A +   +W HF+D++VT   +  V+  +AY+LFY
Sbjct:  271 HLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELD--ETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVVKAKAYILFY 508          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP21_ARATH (Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana GN=UBP21 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.887e-17
Identity = 69/220 (31.36%), Postives = 104/220 (47.27%), Query Frame = 2
Query:   26 ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            A+  L S  ++ E   + PKN+     +Q    + + ++FGG L S +     N  S T +P L   L+I  E V+T+  AL  F+  E LE   T       V T +K ++   L  +   HL RF+       K+   + FPL+L L   +      E   +Y L A V H G   + GHY++  R   + W +FDD+ VT I + +VL   AY+LFY
Sbjct:  252 AHEFLQSFLDKLERCCLDPKNQLGSVSSQDL--NIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKV-TKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466          
The following BLAST results are available for this feature:
BLAST of EY702743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
UBP24_ARATH4.524e-8570.61Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabid... [more]
UBPB_DICDI1.577e-3742.65Ubiquitin hydrolase B OS=Dictyostelium discoideum ... [more]
UBP10_HUMAN3.884e-3638.74Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo s... [more]
UBP10_MOUSE2.517e-3538.74Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus mu... [more]
UBP3_SCHPO1.133e-2734.47Probable ubiquitin carboxyl-terminal hydrolase 3 O... [more]
UBP3_YEAST2.444e-2230.80Ubiquitin carboxyl-terminal hydrolase 3 OS=Sacchar... [more]
UBP8_HUMAN2.141e-1834.57Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sa... [more]
UBP8_MOUSE6.229e-1834.04Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus mus... [more]
UBP3_HUMAN6.887e-1731.02Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sa... [more]
UBP21_ARATH6.887e-1731.36Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-G04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702743 ID=EY702743; Name=EY702743; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGCTAGTATTAACGGAGCCAATACAGCTCTAGTCTCTTTGG
CAGAAGAAGATGAATGGGAAACAGTTGGCCCAAAGAACAAATCTGCAGTG
ACAAGAACACAGAGCTTCCTGCCTTCAGCACTTAGTGATATATTTGGAGG
ACAGCTGAAAAGCGTGGTGAAGGCACAAGGAAATAAAGCTTCTGCAACTG
TTCAGCCATTTCTCTTGCTCCACCTTGATATTTACTCTGAAGCTGTGCAT
ACAATTGAGGATGCTCTTCGTCTGTTTTCTGCTCCAGAAAATCTTGAGGG
ATACCGTACATCATCTACTGGAAATGCTGGTGTTGTGACTGCCAAAAAAT
CTGTCAAGATACAGACGCTTTCAAAGATTTTGATTTTACACCTGATGCGT
TTTAGTTATGGAAGCCAAGGGAGCACAAAGTTGCATAAATCTGTCCGTTT
TCCTCTTCAATTGGTTTTGGGTCGGGATCTGCTTGTTACTCCATCTGCTG
AGGGTCGAAAATATGAACTTGTTGCCACAGTTACCCACCATGGAAGAGAT
CCCTCGAAGGGGCATTATACTGCTGATGCTCGGTATTTTAATGACCAGTG
GCTCCATTTTGACGATGCCTCTGTGACTGCTATTGGGGACAGTAAGGTAT
TGCATGACCAGGCATACGTCCTTTTCTACAACAAGTTTAGAAAGGTGCAG
GATTNATAGTTTTCATGGGAGAAAAGAGCCATATCTGATGGATTCACCCC
ATGACAGTAGCTGAACTGTTTTTCTTAATTTTGAAGTAGTTTTTAAAATG
GTGGTATTGCATATGAAGGATATAACATTTTACTGATGGATATGAAAATG
AAATGAGTGGAAGTCCTGATAAAGTAATTAATGGAAACTCAATT
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