DY306076

Overview
NameDY306076
Unique NameDY306076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306076 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.955e-72
Identity = 87/117 (74.36%), Postives = 98/117 (83.76%), Query Frame = -1
Query:  197 DKNAPD-RNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAWK 544
            +K  P+ RNAP P   N + +SD HFR+IGSNVS YI MVCDTL+NS+PKAVVYCQV  AKRSLLN FYA VGR+EKE+LG MLDEDPQLM+RR TLAKRLELYK ARD+IDAVAWK
Sbjct:  501 EKEKPNPRNAPAP---NADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLELYKQARDDIDAVAWK 614          

HSP 2 Score: 120.553 bits (301), Expect = 4.955e-72
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = -3
Query:  567 VLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPEXE 779
            VLKELVRKSI+ETEELKRFPTL SDIAAAA EALE+FRDESRKTVLRLVDMESSYLTVEFFRKL  +PE E
Sbjct:  433 VLKELVRKSISETEELKRFPTLASDIAAAANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKE 503          
BLAST of DY306076 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.798e-56
Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = -1
Query:  200 PGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 511
            P     +++ D HFRRI SNVS Y+ MV DTL+N+IPKA VYCQV  AK +LLN FY+ + ++E ++LG++LDEDP LMDRR   AKRLELYK ARDEIDAVAW
Sbjct:  519 PSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAVAW 622          

HSP 2 Score: 103.605 bits (257), Expect = 1.798e-56
Identity = 51/69 (73.91%), Postives = 63/69 (91.30%), Query Frame = -3
Query:  573 VLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPE 779
            VLKELVRKSI+ETEELKRFP+LQ ++AAAA  +LEKFR+ES+K+V+RLVDMES+YLT EFFRKL ++ E
Sbjct:  438 VLKELVRKSISETEELKRFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRKLPQEIE 506          
BLAST of DY306076 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.271e-52
Identity = 60/98 (61.22%), Postives = 76/98 (77.55%), Query Frame = -1
Query:  200 ERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 493
            +++ D HFR+I SNV+ YI MV +TL N+IPKAVV+CQV  AK SLLN FYA + + + +RLG++LDE+P LM+RR   AKRLELYK ARDEIDA  W
Sbjct:  513 DQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVW 610          

HSP 2 Score: 99.7525 bits (247), Expect = 4.271e-52
Identity = 49/64 (76.56%), Postives = 59/64 (92.19%), Query Frame = -3
Query:  588 VLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKL 779
            +LKELVRK+IAETEELKRFP+LQ ++ AAA  +L+KFR+ES K+VLRLVDMESSYLTV+FFRKL
Sbjct:  433 ILKELVRKAIAETEELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKL 496          
BLAST of DY306076 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.233e-47
Identity = 55/98 (56.12%), Postives = 77/98 (78.57%), Query Frame = -1
Query:  200 ERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 493
            +R++D + RRIGSNV  Y+ MVC  L+NSIPK++VYCQV  AKRSLL+ F+  +G++E  +L K+LDEDP +  RR ++AKRLELY+ A+ +I+AVAW
Sbjct:  511 DRYNDAYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIAKRLELYRSAQTDIEAVAW 608          

HSP 2 Score: 87.4261 bits (215), Expect = 2.233e-47
Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = -3
Query:  573 VLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPE 779
            +LK+L+ KS+ ET ELK++PTL+ +++ AA ++L++ RDESRK  L LVDMES YLTVEFFRKL +  E
Sbjct:  432 ILKDLIHKSMGETSELKQYPTLRVEVSGAAVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQDSE 500          
BLAST of DY306076 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.363e-46
Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = -1
Query:  200 ERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 493
            +R++D + RRIG+ +  Y+ MVC TL+NSIPK++VYCQV  AKRSLL+ F+  +G+ E +RL  +L+EDP +M+RR+ LAKRLELY+ A+ EIDAVAW
Sbjct:  511 DRYNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAW 608          

HSP 2 Score: 78.9518 bits (193), Expect = 5.363e-46
Identity = 36/66 (54.55%), Postives = 54/66 (81.82%), Query Frame = -3
Query:  582 VLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSE 779
            +LK+LV K+I+ET +LK++P L+ ++ AAA ++LE+ RDES++  L+LVDME  YLTV+FFRKL +
Sbjct:  432 LLKDLVHKAISETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQ 497          
BLAST of DY306076 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 5.363e-46
Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = -1
Query:  200 ERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 493
            +R++D + RRIGSNV  Y+ MVC  L+NSIPK++VYCQV  AKRSLL+ F+A +G  + +RL  +L+EDP +M+RR+ ++KRLELY+ A+ EIDAVAW
Sbjct:  511 DRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAW 608          

HSP 2 Score: 79.7221 bits (195), Expect = 5.363e-46
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = -3
Query:  573 VLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPE 779
            +LK+LV KS+ ET ELK++P L+ ++  AA E+L+K R+ S+K  L+LVDME SYLTV+FFRKL +  E
Sbjct:  432 ILKDLVHKSVNETVELKQYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVE 500          
BLAST of DY306076 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.677e-44
Identity = 55/98 (56.12%), Postives = 78/98 (79.59%), Query Frame = -1
Query:  200 ERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 493
            +R++D + RRIG+ +  Y+ MVC TL++SIPK++VYCQV  AKRSLL+ F+  +G+ E +RL  +L+EDP +M+RR+ LAKRLELY+ A+ EIDAVAW
Sbjct:  511 DRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAW 608          

HSP 2 Score: 76.6406 bits (187), Expect = 1.677e-44
Identity = 34/66 (51.52%), Postives = 54/66 (81.82%), Query Frame = -3
Query:  582 VLKELVRKSIAETEELKRFPTLQSDIAAAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSE 779
            +LK+LV K+++ET +LK++P L+ ++ AA+ ++LE+ RDES++  L+LVDME  YLTV+FFRKL +
Sbjct:  432 LLKDLVHKAMSETLDLKQYPGLRVEVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQ 497          
The following BLAST results are available for this feature:
BLAST of DY306076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DRP1C_ARATH4.955e-7274.36Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1E_ARATH1.798e-5662.50Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH4.271e-5261.22Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
DRP1B_ARATH2.233e-4756.12Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
SDL5A_SOYBN5.363e-4657.14Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
DRP1A_ARATH5.363e-4657.14Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
SDLCA_SOYBN1.677e-4456.12Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAM3BH08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306076 ID=DY306076; Name=DY306076; organism=Citrus sinensis; type=EST; length=781bp
AAAGGGCAACTGAGTAATGATATTAAATGCTAATTTCAAGCTCTCAAATA
CATAGATCAAATTTGACTGTGATTATTATCAAGTACAAAAAGAATGAGCA
AGTAGTTCAATAATGGAGCAAACCTACAGTGTGATATAGCTTACATGGAA
AAAATCGTGCTCCGGTGTCATATCTCATGCAATACAATTTCAATCATTTC
CATGCTACAGCATCAATCTCATCTCTAGCAAATTTGTACAGTTCGAGCCT
TTTAGCGAGGGTGGCCCTCCTATCCATGAGCTGTGGGTCCTCATCCAACA
TTTTACCAAGTCGCTCCTTCTCCTGCCTCCCGACATGCGCATAGAATTGG
TTTAGCAATGATCTCTTGGCAGCAAGTACTTGACAATACACCACAGCCTT
GGGAATAGAATTCTTCAGTGTATCGCAGACCATGCCAATATAACCACTGA
CATTTGACCCAATTCTCCTAAAATGATAGTCAGAAAAACGTTCTGGATTT
TGTGGTCCTGGTGGGGGTGCATTCCTGTCTGGTGCATTCTTGTCTGATGC
ATTTTTATCAGATGCACTCCNTCTCCGGTTGTTCACTAAGCTTCCGGAAA
AATTCAACTGTGAGGTAGCTAGACTCCATATCCACGAGCCTTAAAACTGT
TTTCCGGCTTTCATCACGAAATTTTTCCAAAGCTTCTGTTGCTGCAGCAG
CTATGTCAGATTGAAGAGTCGGAAACCGCTTTAACTCCTCTGTTTCGGCT
ATTGATTTCCGTACAAGTTCTTTCAACACAA
back to top