DY306066

Overview
NameDY306066
Unique NameDY306066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.040e-60
Identity = 109/156 (69.87%), Postives = 128/156 (82.05%), Query Frame = 2
Query:   65 MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVY 532
            MA     T+++++  S ++ + ++NF +D +ITWGDGRG+I NNG LL+LSLDKASGSGFQSK+EYLFGKIDMQ+KLV GNSAGTVTAYYLKSPGSTWDEIDFEFLGN SGDPYTLHTNVFT G GD    F L FDP  DFH YS+LWNPQR ++
Sbjct:    1 MAMISYSTIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIF 156          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 3.847e-59
Identity = 112/167 (67.07%), Postives = 127/167 (76.05%), Query Frame = 2
Query:   50 IDCSTMAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVYLCY*LP 550
            +D ST   S  FTL +S   +      A  F  +FDITWGDGRGK+LNNG+LL+LSLD+ASGSGFQ+K EYLFGKIDMQLKLVPGNSAGTVTAYYLKS G TWDEIDFEFLGN +GDPYT+HTNV+T G GD    FHL FDP  DFH YSVLWNP   V++   +P
Sbjct:    1 MDRSTFILSLLFTLTVSTT-TLFSPVFAGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIP 166          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.616e-57
Identity = 107/149 (71.81%), Postives = 122/149 (81.88%), Query Frame = 2
Query:   83 FTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFV 529
            FT L+  A S     SA++F  D ++ WG+GRGKILNNGQLL+LSLDK+SGSGFQSK+EYLFGKIDMQ+KLVPGNSAGTVT +YLKS GSTWDEIDFEFLGN SGDPYTLHTNV+T G GD    FHL FDP  +FH YS+LWNPQR +
Sbjct:    9 FTTLLVAAFS----VSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRII 153          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.791e-56
Identity = 101/150 (67.33%), Postives = 124/150 (82.67%), Query Frame = 2
Query:   86 TLLISIAISSLMVASAS-NFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVY 532
            T L+ + +S ++ +S S NF +D +ITWGDGRG+I NNG+LL+LSLDK+SGSGFQSK+EYLFGK+ MQ+KLVPGNSAGTVT  YLKSPG+TWDEIDFEFLGN SG+PYTLHTNV+T G GD    F L FDP  +FH Y++LWNPQR ++
Sbjct:    4 TYLLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIF 153          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.787e-55
Identity = 98/149 (65.77%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   89 LLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVYL 535
            +L+ I +S+++   A +FYQDFD+TWG  R KI N GQLLSLSLDK SGSGF+SK EYLFG+IDMQLKLV GNSAGTVTAYYL S G T DEIDFEFLGN SGDPY LHTN+FT G G+    F+L FDP  +FH YS++W PQ  ++L
Sbjct:   15 MLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFL 163          

HSP 2 Score: 23.0978 bits (48), Expect = 5.787e-55
Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 1
Query:  568 NCIPTCDSFPKNXPKRIFFNTLW 636
            N  P    FPKN P RI +++LW
Sbjct:  174 NAEPLGVPFPKNQPMRI-YSSLW 195          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.357e-54
Identity = 97/149 (65.10%), Postives = 117/149 (78.52%), Query Frame = 2
Query:   86 TLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVY 532
            ++ + + +S L+V    +F QD DITWGDGRG ILNNG LL+L LD++SGSGFQSK+EYL+GK+DMQ+KLVPGNSAGTVT +YLKS G TWDEIDFEFLGN SGDPY +HTNV+T G GD    F+L FDP   FH YS+LWNP   V+
Sbjct:   10 SISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVF 158          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.179e-53
Identity = 100/157 (63.69%), Postives = 118/157 (75.16%), Query Frame = 2
Query:   89 LLISIAISS---LMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVYLCY*LP 550
            LL+S+ ++    ++ ASA NFY+ FDITWG+GR  I  NGQLL+ +LDK SGSGFQSK EYLFGKIDM+LKLV GNSAGTVTAYYL S G+ WDEIDFEFLGN +G PYT+HTNVFT G GD    F L FDP  DFH Y+V WNP   ++L   +P
Sbjct:   10 LLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIP 166          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.555e-52
Identity = 99/159 (62.26%), Postives = 120/159 (75.47%), Query Frame = 2
Query:   74 SKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVYLCY*LP 550
            +K   LL+S+ +  L+  SA +FY +FDITWG+GR  I+ +GQLL+ +LDK SGSGFQSK EYLFGKIDM++KLV GNSAGTVTAYYL S G TWDEIDFEFLGN +G PY LHTNVFT G G+    F+L FDP  DFH Y+VLWNP   ++L   +P
Sbjct:    6 TKQSLLLLSLLL--LISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIP 162          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.950e-52
Identity = 94/135 (69.63%), Postives = 111/135 (82.22%), Query Frame = 2
Query:  131 ASNFYQDFDITWGDGRGKILNN-GQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVY 532
            A +F++D  I WGDGRGKIL+N G LLSLSLDK SGSGFQS  E+L+GK+++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN SG PYTLHTNV+T G GD    FHL FDP  DFH Y ++WNPQR ++
Sbjct:   26 AGSFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIF 160          
BLAST of DY306066 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.325e-51
Identity = 97/154 (62.99%), Postives = 120/154 (77.92%), Query Frame = 2
Query:   77 KNFTLLISIAISSLMVAS-ASNFYQDFDITWGDGRGKILNN-GQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNXSGDPYTLHTNVFTNGIGD*IATFHLRFDPNDDFHIYSVLWNPQRFVY 532
            K+FT LI    ++  ++  A +F++D  I WGDGRGKI +N G+LLSLSLDK+SGSGFQS  E+L+GK ++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN SG PYTLHTNV+T G GD    FHL FDP  +FH Y + WNPQR ++
Sbjct:    2 KSFTFLILFLFAAQSISVYAGSFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIF 155          
The following BLAST results are available for this feature:
BLAST of DY306066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH23_ARATH2.040e-6069.87Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH3.847e-5967.07Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.616e-5771.81Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH6.791e-5667.33Xyloglucan endotransglucosylase/hydrolase protein ... [more]
BRU1_SOYBN5.787e-5565.77Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH21_ARATH6.357e-5465.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH9.179e-5363.69Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH4.555e-5262.26Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH5.950e-5269.63Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH19_ARATH1.325e-5162.99Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BG05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306066 ID=DY306066; Name=DY306066; organism=Citrus sinensis; type=EST; length=716bp
GCACATAAATACCAACCCTTATAAGCTGCTTTCTGAAAACTCTCTCTTTA
TTGATTGCAGTACTATGGCTTACTCAAAAAATTTTACTCTGCTCATCTCT
ATAGCAATCAGCTCTTTGATGGTTGCTTCTGCTAGTAATTTCTACCAAGA
CTTTGATATCACTTGGGGAGATGGCCGTGGTAAGATACTCAACAACGGCC
AGCTTCTCTCCCTCTCCCTTGACAAAGCCTCAGGCTCAGGCTTCCAGTCC
AAGAGCGAGTACCTTTTTGGCAAAATCGACATGCAACTCAAGCTTGTCCC
TGGCAATTCTGCCGGCACAGTCACCGCCTACTACTTAAAATCACCAGGAT
CAACATGGGATGAGATAGACTTTGAATTCTTGGGGAATTTNAGTGGTGAT
CCTTATACTCTTCATACTAATGTGTTCACAAATGGCATAGGTGACTGAAT
AGCAACATTCCACCTCAGATTTGACCCCAATGATGACTTTCACATATATT
CCGTTCTCTGGAACCCTCAACGTTTTGTCTATCTATGTTACTGACTACCT
CGTTAAATGGTTCAATAAATTGTATTCCAACGTGTGACTCCTTTCCCAAA
AACCNCCCAAAGAGGATTTTTTTTAATACTCTGTGGACNCTATNTCTGGT
GCNCCTGAAGGGGGACTTCTNTGNNNAGTTAGGACNCTANTCTCNTTTGN
NNGGCTTNNACANATA
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