DY306053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.138e-86 Identity = 158/207 (76.33%), Postives = 177/207 (85.51%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 VEVF+ FY+TKTKHRKLTWIYSLGTC++ GKF+ + ELIV+TYQA+ LLLFN++D+LSY+EI+ QLNLS +D+VRLLHSLSCAKYKIL KEPNTKT+S D FEFNSKFTD+MRRIKIPLPP RRYAIDA+IVRIMKSRKVLGHQQLV ECVEQL RMFKPD KAIKKR+EDLITRDYLERDK NPNMFRYLA Sbjct: 532 VEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 2.252e-34 Identity = 88/210 (41.90%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKI----PLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 EVF+ FY K RKL W +LG L +F+ E V+ +Q LL+FN D S+ EI + D ++ R L SL+C K ++L K P K + D F FN +F K+ RIKI R+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI RDY+ERDK NPN + Y+A Sbjct: 552 EVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQYHYVA 759
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 1.907e-33 Identity = 87/210 (41.43%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKI----PLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E+F+ FY K RKL W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R L SL+C K ++L K P K I D F N F K+ RIKI R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+ERDK NPN + Y+A Sbjct: 688 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 895
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.907e-33 Identity = 87/210 (41.43%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKI----PLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 EVF+ FY K RKL W +LG L F+ E V+ +Q LL+FN D S+ EI + D ++ R L SL+C K ++L K P K + D F FN+ F K+ RIKI R+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI RDY+ERDK +PN + Y+A Sbjct: 552 EVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQYHYVA 759
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.511e-30 Identity = 80/216 (37.04%), Postives = 114/216 (52.78%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIP------LPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 ++ F +FY +K RKL W S+G+ ++ F+ R +L V+T + LLLF + L + EI+ + N+ D+ R L SL+CAKYKIL K+P + ++ D F FN F + RIKI + R++ DA IVR+MK RKV H QL+ E QL F P IK+RIE LI R+YL+R N ++ YLA Sbjct: 570 IDQFTDFYLSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.197e-27 Identity = 82/244 (33.61%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNT---------------------------------KTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E F+ +Y + R L W ++GT + F S++ EL V++YQ LLLFN +L++ EI Q + D+ R L +L+ K KIL++E P+T K+I +D F FN+KF K+ R+K+ R++ I+ASIVRIMK+RK L H LV E ++QL F P+ +KKRIE LI R+YLER K + ++ Y+A Sbjct: 526 EAFKSYYLSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.549e-27 Identity = 79/236 (33.47%), Postives = 118/236 (50.00%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKF----------------------ESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E+FR FY K R+LT + +G+ +L F +R L V+T+Q + L+LFN+ D+ ++ EI + ++ + ++VR L SL+C K ++L KEP +K I F N +FT K+ R+KI R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.324e-26 Identity = 78/236 (33.05%), Postives = 118/236 (50.00%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKF----------------------ESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E+FR FY K R+LT + +G+ +L F +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+C K ++L KEP +K I F N +FT K+ R+KI R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.324e-26 Identity = 78/236 (33.05%), Postives = 118/236 (50.00%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKF----------------------ESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E+FR FY K R+LT + +G+ +L F +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+C K ++L KEP +K I F N +FT K+ R+KI R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.729e-26 Identity = 78/236 (33.05%), Postives = 118/236 (50.00%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKF----------------------ESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E+FR FY K R+LT + +G+ +L F +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+C K ++L KEP +K I F N +FT K+ R+KI R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768 The following BLAST results are available for this feature:
BLAST of DY306053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306053 ID=DY306053; Name=DY306053; organism=Citrus sinensis; type=EST; length=1111bpback to top |