DY306051

Overview
NameDY306051
Unique NameDY306051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1201 contig Csv1_Contig1201:456..1263. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: YOOF_SCHPO (Uncharacterized hydroxylase C887.15c OS=Schizosaccharomyces pombe GN=SPBC887.15c PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.464e-49
Identity = 82/146 (56.16%), Postives = 107/146 (73.29%), Query Frame = 1
Query:  106 IAIARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGNLFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMP 543
            I  A Q+  A  ++D+WQYF HRY+H+NK LY  IH+ HHRL VPYA GALYNHP EGL+ DT G  +++L +G+SP+ ++ FF+ +T+KTVDDHCG   P +   +FF NN  YHD+HHQ YG + NF+QPFF  WD +LGTYMP
Sbjct:  128 IVPAFQYFFAFFIIDSWQYFWHRYLHYNKKLYNMIHAHHHRLQVPYAMGALYNHPFEGLILDTFGAGVAYLAAGLSPQQAVIFFTLSTLKTVDDHCGYVFPYDPLQMFFANNARYHDLHHQPYGFQKNFSQPFFTFWDHVLGTYMP 273          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: SUR2_YEAST (Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae GN=SUR2 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.538e-41
Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  115 ARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGNLFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 534
            A +     L +DTWQYF+HR MH NK LY+  HS+HH L VPYA+GAL+N+P+EG L DT+G  ++  ++ ++ R  I  F+FAT+KTVDDHCG  LP + F   F NN  YHDIHHQ +G K NFAQPFF  WD +  T
Sbjct:  158 ALKIFAGFLFVDTWQYFLHRLMHMNKTLYKWFHSVHHELYVPYAYGALFNNPVEGFLLDTLGTGIAMTLTHLTHREQIILFTFATMKTVDDHCGYALPLDPFQWLFPNNAVYHDIHHQQFGIKTNFAQPFFTFWDNLFQT 297          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_PIG (C-4 methylsterol oxidase OS=Sus scrofa GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.506e-17
Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 1
Query:  106 IAIARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFAT---IKTVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMPYSL--EKR 561
            IA+AR F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ T   I+T+D H G  +P N  H+  F   + +HD HH  +   Y      F  WDRI GT   Y+   EKR
Sbjct:  137 IALARCFGCAV-IEDTWHYFLHRLLHHKR-IYKYIHKIHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIMLLCDHV-ILLWAWVTVRLIETIDVHSGYDIPLNPLHLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGTDAQYNAYNEKR 285          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_MACFA (C-4 methylsterol oxidase OS=Macaca fascicularis GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 1
Query:  112 IARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMPY 546
            +AR F  A+ + DTW YFMHR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N  ++  F   + +HD HH  +   Y      F  WDRI GT   Y
Sbjct:  139 LARCFGCAV-IEDTWHYFMHRLLHHKR-IYKYIHKVHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGTDSQY 278          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_PONAB (C-4 methylsterol oxidase OS=Pongo abelii GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  112 IARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMPYSL--EKR 561
            +AR F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N  ++  F   + +HD HH  +   Y      F  WDRI GT   Y+   EKR
Sbjct:  139 LARCFGCAV-IEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGTDSQYNAYNEKR 285          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_HUMAN (C-4 methylsterol oxidase OS=Homo sapiens GN=SC4MOL PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  112 IARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMPYSL--EKR 561
            +AR F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N  ++  F   + +HD HH  +   Y      F  WDRI GT   Y+   EKR
Sbjct:  139 LARCFGCAV-IEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGMEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNY---ASTFTWWDRIFGTDSQYNAYNEKR 285          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_DANRE (C-4 methylsterol oxidase OS=Danio rerio GN=sc4mol PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 1
Query:  103 PIAIARQFVIAMLVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFAT---IKTVDDHCGLWLPGNLFHVF-FKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 534
            P  +A+ F  A+ + DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L    I GA  F+ + +     I  +++ T   ++T+D H G  +P N  H+  F     +HD HH  +   Y      F  WDR+  T
Sbjct:  136 PFLLAQCFGCAV-IEDTWHYFLHRALHHRR-IYKYIHKVHHDFTSPFGMQAEYAHPLETL----ILGAGFFIGTMVFCNHMILLWAWVTFRLLETIDVHSGYDIPLNPLHLIPFYAGARFHDFHHMNFVGNYGST---FTWWDRLFDT 274          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_RAT (C-4 methylsterol oxidase OS=Rattus norvegicus GN=Sc4mol PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  139 LVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIKTVDDHCGLWLPGN-LFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMPY 546
            ++ DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+  T G  +  ++      +   + +   ++T+D H G  +P N L ++ F     +HD HH  +   Y      F  WDRI GT + Y
Sbjct:  147 VIEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGIEAEYAHPLETLILGT-GFFIGIVLLCDHVILLWAWVTMRLLETIDVHSGYDIPLNPLNYIPFYTGARHHDFHHMNFIGNY---ASTFTWWDRIFGTDVQY 278          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_MOUSE (C-4 methylsterol oxidase OS=Mus musculus GN=Sc4mol PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.570e-14
Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1
Query:  139 LVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFATIK---TVDDHCGLWLPGN-LFHVFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGTYMPY 546
            ++ DTW YF+HR +HH + +Y++IH +HH    P+   A Y HP+E L+   +G      +  +   V I  +++ TI+   T+D H G  +P N L  V F     +HD HH  +   Y      F  WD++ GT   Y
Sbjct:  147 VIEDTWHYFLHRLLHHKR-IYKYIHKVHHEFQAPFGIEAEYAHPLETLI---LGTGFFIGIVLLCDHV-ILLWAWVTIRLLETIDVHSGYDIPLNPLNLVPFYTGARHHDFHHMNFIGNY---ASTFTWWDKLFGTDAQY 278          
BLAST of DY306051 vs. ExPASy Swiss-Prot
Match: ERG25_CHICK (C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.570e-14
Identity = 46/136 (33.82%), Postives = 69/136 (50.74%), Query Frame = 1
Query:  139 LVMDTWQYFMHRYMHHNKFLYRHIHSLHHRLVVPYAFGALYNHPIEGLLNDTIGGALSFLVSGMSPRVSIFFFSFA---TIKTVDDHCGLWLPGNLFH-VFFKNNTAYHDIHHQLYGSKYNFAQPFFVMWDRILGT 534
            ++ D W YF+HR +HH + +Y++IH +HH  V P+   A Y HP+E L    I GA  F+   +     +  +++     ++T+D H G  +P N  H V F     +HD HH  +   Y      F  WDRI GT
Sbjct:  147 VIEDAWHYFLHRLLHHKR-IYKYIHKVHHEFVSPFGMQAEYAHPLETL----ILGAGFFIGIVVFCNHVVLLWAWVICRLMETIDVHSGYDIPLNPLHLVPFYAGARFHDFHHMNFIGNY---ASTFTWWDRIFGT 274          
The following BLAST results are available for this feature:
BLAST of DY306051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
YOOF_SCHPO4.464e-4956.16Uncharacterized hydroxylase C887.15c OS=Schizosacc... [more]
SUR2_YEAST1.538e-4153.57Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces ... [more]
ERG25_PIG4.506e-1735.44C-4 methylsterol oxidase OS=Sus scrofa GN=SC4MOL P... [more]
ERG25_MACFA2.472e-1534.23C-4 methylsterol oxidase OS=Macaca fascicularis GN... [more]
ERG25_PONAB3.229e-1533.97C-4 methylsterol oxidase OS=Pongo abelii GN=SC4MOL... [more]
ERG25_HUMAN3.229e-1533.97C-4 methylsterol oxidase OS=Homo sapiens GN=SC4MOL... [more]
ERG25_DANRE3.229e-1533.11C-4 methylsterol oxidase OS=Danio rerio GN=sc4mol ... [more]
ERG25_RAT4.217e-1532.12C-4 methylsterol oxidase OS=Rattus norvegicus GN=S... [more]
ERG25_MOUSE3.570e-1432.86C-4 methylsterol oxidase OS=Mus musculus GN=Sc4mol... [more]
ERG25_CHICK3.570e-1433.82C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MO... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BF01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306051 ID=DY306051; Name=DY306051; organism=Citrus sinensis; type=EST; length=809bp
GAAGGCGTTCTCCTTCAGCAAGTTTTTCAGGCTATTGTTGCAATTCTCTT
GTTTGCGGTGACAGGAAATGGTGCTGGGGCAGAAGCCAATCAACAGTCTT
CTCCAATTGCTATAGCTCGGCAGTTTGTTATAGCAATGTTGGTTATGGAT
ACATGGCAGTATTTTATGCATAGGTACATGCACCACAACAAGTTTTTGTA
TCGACACATCCATTCTCTACATCACCGCCTTGTTGTCCCCTATGCATTTG
GAGCTTTGTACAATCACCCCATTGAGGGGCTTCTTAATGACACAATTGGC
GGTGCCTTATCTTTTCTCGTTTCCGGTATGTCTCCCCGAGTCTCCATCTT
CTTCTTTTCCTTTGCCACCATCAAAACAGTGGATGACCACTGTGGATTAT
GGCTTCCTGGAAACCTCTTCCACGTGTTCTTCAAAAACAACACTGCCTAT
CATGATATCCACCATCAACTTTATGGGAGCAAATACAACTTTGCACAACC
ATTCTTCGTGATGTGGGATAGAATTCTTGGAACCTATATGCCCTATTCAC
TTGAGAAGAGACCAGATGGTGGCTTTGAAGCGCTGGCTACAAAGGATTAC
AAGCAGACGAAAGATTACAAGGACAACTGATTATACGTTAGGACCATCAT
TTTGTACTAGCATTATTTAATTTTAATTTTTTTTTTCTCTTTTTCACCTT
TACTGATGAACCACACCGCCCTGTGATTTGTACATATCTATATTGTTTGG
GTTTAAAATTCCCATCATTTTTGTCTAATATAATTTAATAAATGAGGGTG
AGCTACAAT
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