DY306049

Overview
NameDY306049
Unique NameDY306049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1250
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY306049_ssr331 microsatellite DY306049_ssr331:331..342. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8273 contig Csv1_Contig8273:1837..3081. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 1.322e-94
Identity = 178/227 (78.41%), Postives = 189/227 (83.26%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPXXXXXXXXXXXXXXXXXXMKESSAAKEDVDTEYSGKDEL 681
            RL KKNYEVI FTDPVDEYLMQYLMDYEDKKFQNVSKEGLK+GKD+KDKELKESFKELTKWWKGALASENVDDVK+SNRL NTPCVVVTSKYGWS+NMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD ED  V+QTA+L+YQTALMESGF LNDPK+FAS IY +VKSSL ISP                    ESSAA++        KDEL
Sbjct:  591 RLTKKNYEVILFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKIGKDSKDKELKESFKELTKWWKGALASENVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLKISPDATVEEEDDTEEAEAESGTTESSAAEDAGAETLDLKDEL 817          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 4.402e-90
Identity = 160/188 (85.11%), Postives = 177/188 (94.15%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 564
            RL KK YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLK+GKD+KDKELKE+FKELTKWWKG LASENVDDVK+SNRL +TPCVVVTSK+GWSANMERIMQSQTLSDA+KQAYMRGKRVLEINPRHPIIKEL++R+  DPED  V++TAQL+YQTAL+ESGF L DPKDFA+RIY++VKS LNISP
Sbjct:  587 RLIKKGYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKVGKDSKDKELKEAFKELTKWWKGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQSQTLSDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDFAARIYNSVKSGLNISP 774          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 8.041e-84
Identity = 149/188 (79.26%), Postives = 172/188 (91.49%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 564
            +L KKNYEVI+FTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKD+K K+LKESFKELT WWK AL +E +D VK+SNRL NTPCVVVTSKYGWS+NME+IMQ+QTLSDASKQAYMRGKRVLEINPRHPIIKELR++V +D +  G++QTA+L+YQTALMESGF+L DPKDFAS IY +V+ SL++SP
Sbjct:  584 QLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTDWWKKALDTEGIDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSP 771          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 9.610e-45
Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNIS 561
            R+K++ +EVI+ TDP+DEY +Q L +Y+ KK  +V+KEGL+L +  ++K    E K  F+ L K  K  L  + V+ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H +IK LRERV  D  D  V+    L+++TAL+ SGFSL DP+  ASRIY  +K  L+I+
Sbjct:  492 RVKRRGFEVIYMTDPIDEYCVQQLKEYDGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCKVMKDIL-EKKVEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSGFSLEDPQLHASRIYRMIKLGLDIT 681          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 1.255e-44
Identity = 93/190 (48.95%), Postives = 132/190 (69.47%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 558
            R+KK+ +EVI+ T+P+DEY++Q L +Y+ K+  +V+KEGL+L +D  +K+ +E     F+ L K  K  L S+ V+ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM GK+ LEINP H II+ LR+R   D  D  V+    L+++TAL+ SGFSL++P   ASRIY  +K  L I
Sbjct:  490 RVKKRGFEVIYMTEPIDEYVIQQLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFENLCKVMKSVLESK-VEKVMVSNRLVDSPCCIVTSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVILLFETALLSSGFSLDEPGTHASRIYRMIKLGLGI 678          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 8.994e-43
Identity = 87/190 (45.79%), Postives = 132/190 (69.47%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 558
            R+K + +EV++ T+P+DEY++Q+L +Y+ K+  +V+KEGL+L +D  +K+ +E     F+ L K  K  L S+ V+ V VSNRL ++PC +VTS++GWSANMERIM++Q L D +   YM GK+ LEINP HPI++ LR++   D  D  V+    L+++T+L+ SGFSL+ P+  ASRIY  +K  L I
Sbjct:  495 RVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFEGLCKLMKSILDSK-VEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVEALRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI 683          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 8.994e-43
Identity = 86/190 (45.26%), Postives = 132/190 (69.47%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 558
            R+K + +EV++ T+P+DEY++Q+L +Y+ K+  +V+KEGL+L +D  +K+ +E     F+ L K  K  L ++ V+ V VSNRL ++PC +VTS++GWSANMERIM++Q L D +   YM GK+ LEINP HPI++ LR++   D  D  V+    L+++T+L+ SGFSL+ P+  ASRIY  +K  L I
Sbjct:  495 RVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNK-VEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI 683          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 1.175e-42
Identity = 89/190 (46.84%), Postives = 126/190 (66.32%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 558
            RL+K   EVI+  +P+DEY +Q L +Y+ K   +V+KEGL+L +D ++K    ELK  ++ L K  K  L  + ++ V VSNRL ++PC +VTS YGW+ANMERIM+SQ L D S   YM  K+ LEINP HPI++ LRE+   D  D  V+    L+++TAL+ SGF+L+DP+  A+RIY  +K  L I
Sbjct:  503 RLRKAGLEVIYMIEPIDEYCVQQLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCKIMKDIL-DKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLGI 691          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.534e-42
Identity = 90/190 (47.37%), Postives = 129/190 (67.89%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 558
            R+K + +EV++  DP+DEY +Q L +Y+ KK  +V+KEGL+L +  ++K    E K +++ L K  K  L  + ++ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H I+K LRERV  D  D  V+    L+++TAL+ SGFSL +P+  ASRIY  +K  L+I
Sbjct:  484 RVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDIL-EKKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGLDI 672          
BLAST of DY306049 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.004e-42
Identity = 85/190 (44.74%), Postives = 128/190 (67.37%), Query Frame = 1
Query:    1 RLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 558
            R++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V++V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  502 RVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
The following BLAST results are available for this feature:
BLAST of DY306049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
ENPL_CATRO1.322e-9478.41Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_ARATH4.402e-9085.11Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_HORVU8.041e-8479.26Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HSP90_BRUPA9.610e-4549.74Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_ANOGA1.255e-4448.95Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HSP83_DROPS8.994e-4345.79Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROME8.994e-4345.26Heat shock protein 83 OS=Drosophila melanogaster G... [more]
H90A1_DANRE1.175e-4246.84Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HSP90_CAEBR1.534e-4247.37Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HS90B_PONAB2.004e-4244.74Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BE11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306049 ID=DY306049; Name=DY306049; organism=Citrus sinensis; type=EST; length=1250bp
AGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGATCCAGTTGA
TGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAAGTTCCAAA
ATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAA
CTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGC
CAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGATAACACCC
CTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGG
ATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCATATATGCG
GGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCATCAAAGAGC
TCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACA
GCCCAACTCATTTACCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAA
TGATCCCAAGGATTTTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCC
TTAACATTAGCCCTGATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAG
ACTGATGCTGACACTGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGT
GGATACAGAGTATTCTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGC
ATGGGCAACAACATCCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAG
TGCGTTCATTTTCCAGTTTTGAAAACTTTGGTGAAAAAACGTTTTTAGAT
CTTAGATTCAATGTAACCATAATCACCGGGGAATTTTGTCTTTTAACAGT
TGACACTAATCAATATGGAGGAATCCCCGTGGCAAATTTAGAATGGTTTG
TGTAATTCCCTTAAATCCATTGGGCTTCCATTTTCTCCCTTGTTTAAAAA
AAAAAGGGGGGGGCCCCGGTACCCCATTTCGCCCCATTAAGGGGATCGAT
ATTTCCATATTCCCTGGGCCCGTCTTTTTTTACAACCCCCCTTGGCAGGG
GGAAAAACCCCTGGCGGCTTAACCCCCACTTTTATTTCCCCCCTGGGCAG
CCCACCACCTCCCCCCTTTTTTCCCCCCCCCGGGCGCGGATAAAAAAAAA
CAAAAAAAGAGGCCCCCCCCCCACCCCCCACTTTCCCCCCTCCCCTTCCC
CCCACCCCGATTTGTGGTCCCCCCCCCCCCCCCCCCCCCTGGGGAAGGAA
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