DY306038

Overview
NameDY306038
Unique NameDY306038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY306038_ssr870 microsatellite DY306038_ssr870:870..881. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9487 contig Csv1_Contig9487:715..1624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17
Identity = 77/246 (31.30%), Postives = 118/246 (47.97%), Query Frame = 2
Query:   26 KGCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMASVDLRF---YVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXXFEDTRVHPQRISNKKLNKLMVNFDGKFQAD 712
            +GC+G+F+   P    S   E   +   VE M +  ++ AC +  TV ++VFTSS    V    R  P    +DE +W+DV+ C++ K+  W + +SKTLAEK A A A + G+ +V+I   LV+GP ++ S P         + G A  Y   ++  V L       DA I +FE+ ++ GRY+C +H +  +  A  L                 +D  + P R S+KKL  L   F  K   D
Sbjct:   81 RGCTGVFHVATPMDFLSKDPENEVIKPTVEGMIS--IMRACKEAGTVRRIVFTSS-AGTVNLEERQRPV---YDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHY--SILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDD--LQPVRFSSKKLQDLGFTFRYKTLED 316          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17
Identity = 73/237 (30.80%), Postives = 113/237 (47.68%), Query Frame = 2
Query:   26 KGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--YLKGAAEMYED----GVMAS---VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXXFE--DTRVHPQRISNKKLNKLMVNF 691
            +GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTLAE+ AW  A +  I  ++I   LV+GP +  S P   + G + +  +    G++     V L     +HI ++E   + GRY+C +H    +E    L +M             F+  D  + P   S+KKL ++   F
Sbjct:   76 QGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHE----LVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEF 304          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.689e-16
Identity = 72/237 (30.38%), Postives = 113/237 (47.68%), Query Frame = 2
Query:   26 KGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--YLKGAAEMYED----GVMAS---VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXXFE--DTRVHPQRISNKKLNKLMVNF 691
            +GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWSDV  C+  K+  W + +SKTLAE+ AW  A +  I  ++I   LV+GP +  S P   + G + +  +    G++     V L     +HI +++   + GRY+C +H    +E    L +M             F+  D  + P   S+KKL ++   F
Sbjct:   76 QGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHE----LVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEF 304          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.512e-16
Identity = 69/236 (29.24%), Postives = 107/236 (45.34%), Query Frame = 2
Query:   29 GCSGLFYSFEPPSDHSTYDELTAEVETMAAH-NVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVN--LCKKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS---------NPYLKGAAEMYEDGVMASVDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXXFE--DTRVHPQRISNKKLNKLMVNF 691
            GC G+F+   P    S   E      T+     +++AC +  TV + VFTSS   V    H+ N     +DE +WSD+   + KK   W + +SKTLAEK AW  A ++G+  +SI   LV+GP +T S         +P  +  A          V L    +AHI ++E  ++ GRY+C +H    +   + +++              FE  D  +     S+KKL  +  NF
Sbjct:   77 GCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKNV----YDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHIFLYEQAAAKGRYICSSH----DATILTISKFLRPKYPEYNVPSTFEGVDENLKSIEFSSKKLTDMGFNF 304          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.287e-14
Identity = 62/187 (33.16%), Postives = 90/187 (48.13%), Query Frame = 2
Query:   26 KGCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS---------VDLRFYVDAHICVFEDVSSYGRYLCFNH 541
            KGC+G+F+   P    S   E   +   +E M    ++++CA   TV ++VFTSS   V    H+       +DE  WSD+  C  KK   W + +SKTLAE+ AW  A +  I  ++I   LV+GP +  S P     A     G  A          V L    +AHI +FE+  + GRY+C +H
Sbjct:   76 KGCTGVFHVATPMDFESKDPENEVIKPTIEGMLG--IMKSCAAAKTVRRLVFTSSAGTVNIQEHQ----LPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSH 256          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 71/231 (30.74%), Postives = 105/231 (45.45%), Query Frame = 2
Query:   29 GCSGLFYSFEPPSDHSTYDE---LTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLCKKFKL--W-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS---------VDLRFYVDAHICVFEDVSSYGRYLCFNHVINCNEDAMKLARMXXXXXXXXXXXXXFE--DTRVHPQRISNKKL 670
            GC+G+F+   P    S   E   +   VE M +  ++ AC +  TV ++VFTSS  +V   N  + P    +D+ NWSD++ C++ K+  W + +SK LAEK A   A + G+  +SI   LV+GP ++   P     A     G  A          V L    DA   +FE   + GRY+C +H    +     LARM             F   D  + P   S+KKL
Sbjct:   77 GCTGVFHVATPMDFDSQDPENEVIKPTVEGMLS--IMRACKEAGTVKRIVFTSSAGSV---NIEERPRPA-YDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYICSSH----DATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSKKL 297          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 59/185 (31.89%), Postives = 87/185 (47.03%), Query Frame = 2
Query:   26 KGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNPYLKGAAEMYEDGVMAS---------VDLRFYVDAHICVFEDVSSYGRYLCFNH 541
            +GC G+F+   P    S   E      T+    +++ +C +  TV K+VFTSS   V    +      H +DE +WSD++    KK   W + +SKTLAEK AW       IS +SI   LV+GP +T + P     A     G  A          V L    + HI ++E+  + GRY+C +H
Sbjct:   77 QGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV----NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSH 257          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.402e-11
Identity = 53/190 (27.89%), Postives = 92/190 (48.42%), Query Frame = 2
Query:   29 GCSGLFYSFEP---PSDHSTYDELTAEVETMAAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLC---KKFKLWHGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP---------------YLKGAAEMYE-DGVMASVDLRFYVDAHICVFEDVSSYGRYLC 532
            GC  +F+   P    S+    D +   ++ +   NVL++C ++ +V +V++TSS  AV  +N   + T    +E NW+DV      K F   + +SK LAEKTAW  A +  I++V++   L+ G  +    P               ++ G  EM +  G ++ V +     AH+ + E  ++ GRY+C
Sbjct:   81 GCEYIFHVATPINFKSEDPEKDMIKPAIQGVI--NVLKSCLKSKSVKRVIYTSSAAAVSINNL--SGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYIC 266          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/182 (32.42%), Postives = 90/182 (49.45%), Query Frame = 2
Query:   26 KGCSGLFYSFEPPSDHSTYDELTAEVETMAAH-NVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNL--CKKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTIS-NPYLKGAAEMY--EDGVMAS---VDLRFYVDAHICVFEDVSSYGRYLCFNH 541
            +GC G+F+   P    S   E      T+    +++E+CA+ NTV ++VFTSS  A       D      +DE +WSD++    KK   W + +SK LAEK A   A    I  +SI   LV+GP +T +  P L  A  +     G++     V L    +AHI ++E   + GR++C +H
Sbjct:   88 QGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSS--AGTLDVQEDQKLF--YDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTFPPSLITALSLITAHYGIIKQGQYVHLDDLCEAHIFLYEHPKAEGRFICSSH 265          
BLAST of DY306038 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 56/182 (30.77%), Postives = 85/182 (46.70%), Query Frame = 2
Query:   26 KGCSGLFYSFEPPSDHSTYDELTAEVETMAAH-NVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWSDVNLC--KKFKLW-HGLSKTLAEKTAWALAMDRGISMVSINGGLVMGPDVTISNP--------YLKGAAEMYEDGVMAS-VDLRFYVDAHICVFEDVSSYGRYLC 532
            +GC G+F+   P    S   E      T+    +++ +CA+  TV K+V+TSS   V    +        +DE +WSD++    KK   W + +SKTLAEK A   A +  I  VSI   LV+GP +  + P         + GA   Y        V L    + HI ++E+  + GRY+C
Sbjct:   77 EGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV----NVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAESHYSIIKQGQYVHLDDLCECHIFLYENPEAKGRYIC 254          
The following BLAST results are available for this feature:
BLAST of DY306038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
DFRA_MAIZE1.862e-1731.30Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_MALDO9.243e-1730.80Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_PYRCO2.689e-1630.38Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_ARATH3.512e-1629.24Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_VITVI3.287e-1433.16Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_HORVU7.324e-1430.74Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_GERHY1.249e-1331.89Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
BAN_ARATH3.402e-1127.89Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
DFRA_SOLLC5.803e-1132.42Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_CALCH9.898e-1130.77Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3BD05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306038 ID=DY306038; Name=DY306038; organism=Citrus sinensis; type=EST; length=909bp
GGCATTCACGAGGCTGTGGTAATCAAAGGGTTGCTCCGGTCTGTTCTACT
CCTTTGAGCCTCCCTCCGACCACTCCACCTACGATGAATTGACGGCGGAA
GTAGAGACAATGGCAGCTCACAACGTGCTGGAAGCGTGCGCACAGACAAA
TACAGTTGACAAAGTCGTCTTCACGTCTTCTCTAACCGCCGTCGTCTGGA
GTAACCACCGCGACAATCCGACGTCGCACGACTTCGATGAGCGAAATTGG
AGTGACGTCAATTTGTGCAAGAAATTCAAGCTATGGCATGGTTTGTCAAA
GACGCTGGCGGAGAAGACAGCGTGGGCCCTAGCGATGGACCGAGGGATAA
GCATGGTGTCGATAAACGGAGGGCTGGTGATGGGTCCAGACGTCACGATC
TCGAATCCGTATCTAAAAGGAGCGGCCGAGATGTACGAAGATGGTGTGAT
GGCTTCGGTGGACCTGAGATTCTACGTTGATGCTCACATTTGCGTGTTCG
AAGACGTTTCATCGTACGGTCGTTATCTCTGCTTCAACCACGTCATCAAC
TGCAACGAAGACGCCATGAAGCTCGCCCGCATGCTATTGCCACCCTCCGA
CACTTCAACTCCTCCGCTAAGTTTTGAGGATACAAGAGTGCACCCACAGA
GAATAAGCAACAAGAAGCTGAACAAACTGATGGTAAATTTTGATGGCAAG
TTTCAAGCTGATTGCTCCGCGGACTAATATGGCAATTATGTAATTTATAA
TTTTGTTTAAATATTTAAGTTCTTTTCTTGTGTATGTTTTACACAATTTA
AGCTCTTATTGTTTTCAATGTTAAAAGCATAACTCTTTATATTAGGGTTA
AACTTCTTTTGATCTTTCGAAATAAATAAATTTCATTAAAAAAAAAGAAC
CCTGAAATT
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