DY306027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 5.428e-35 Identity = 68/111 (61.26%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 414 VSCSYPYKNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCETTNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSD-EDGDDESWVVPVNNIPQDWKAGKPYDTGVQV 743 VSC+YP KNI KI E S++P+YL F IWYQQG +D AVQLCET N C+LL R+HGAVW SPPSGPLS+RMLFS ++W+VP N +PQ+W AG YD+GVQV Sbjct: 143 VSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATYDSGVQV 253 HSP 2 Score: 95.5153 bits (236), Expect = 7.146e-19 Identity = 45/66 (68.18%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 2 GACYQVRCLNSYYCSDRGATVVITDSGSGPNTDFILSRRAFGRMAQTKDAAAAILAHGVVNIEYRR 199 GACYQVRC N YYCS G T+VITDSG+ TDFILS+ AF RMAQ+ DA A+L GVV IEYRR Sbjct: 77 GACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRR 142
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.390e-14 Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 414 VSCSYPYKNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCETTNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSDEDGDDESWVVPVNNI-PQDWKAGKPYDTGVQV 743 V C Y ++++++++DE+S P+ L YQ G+ D AV + + + + K + R HG W+ + P GPL +R++ + G D WV + P+ W+AG+ YDTGVQ+ Sbjct: 154 VPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVT--GGYDGKWVWADREVLPRRWRAGEVYDTGVQI 262
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.898e-14 Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 414 VSCSYPYKNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCETTNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSDEDGDDESWVVPVNNIPQDWKAGKPYDTGVQV 743 V C Y K + ++++E S P+YL + YQ G+ + A+ + + + + RSHGAVW T P+G L R + + G D V +P +W+AGK YD GVQ+ Sbjct: 141 VPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVT--AGYDGKMVWSQRVLPANWEAGKSYDAGVQI 248
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 9.961e-13 Identity = 35/110 (31.82%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 414 VSCSYPYKNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCETTNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSDEDGDDESWVVPVNNIPQDWKAGKPYDTGVQV 743 V C+Y +N+ ++++E S P+YL + YQ G+ + + + + + RSHGAVW T P+G L + F+ G D V +P +W +G+ YD GVQ+ Sbjct: 140 VPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFK--FTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQI 247
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.898e-12 Identity = 36/111 (32.43%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 414 VSCSYPYKNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCET-TNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSDEDGDDESWVVPVNNIPQDWKAGKPYDTGVQV 743 V C Y KN+ ++++E S P+YL + YQ G+ + ++ + + ++ + RSHGAVW T P+G + R + + G D + + +P +W+AGK YD GVQ+ Sbjct: 140 VPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVT--GGYDGKMIWSQSVLPSNWEAGKIYDAGVQI 248
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.457e-12 Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 414 VSCSYPY-KNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCETTNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSDEDGDDESWVVPVNNI-PQDWKAGKPYDTGVQV 743 V C Y +N++I+++EKS P L YQ G+ D AV + + K + R +G W+T P+GPL R++ + G D WV + P+ W AG+ YD GVQ+ Sbjct: 149 VPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVT--GGYDGKWVWADGEVLPRRWTAGRVYDAGVQI 258
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 8.461e-12 Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 2 GACYQVRCLNSYYCSDRGATVVITDSGSGPNTDFILSRRAFGRMAQTKDAAAAILAHGVVNIEYRR 199 GACYQVRC +CS+ G VV TDSG G TDFILS +A+GRMA+ + + GVVN+EY+R Sbjct: 77 GACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMAR-PGTENQLYSFGVVNVEYQR 141 HSP 2 Score: 70.8626 bits (172), Expect = 1.879e-11 Identity = 39/108 (36.11%), Postives = 54/108 (50.00%), Query Frame = 3 Query: 414 VSCSYPYKNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCETTNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSDEDGDDESWVVPVNNIPQDWKAGKPYDTGV 737 + C Y N+ KI EKS PHYL ++ Y G D AV++ + + + R GAV +PP G L+LR L G +W+ N IP DW AG YD+ + Sbjct: 142 IPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAG--INWIQSPNAIPADWTAGATYDSNI 247
BLAST of DY306027 vs. ExPASy Swiss-Prot
Match: EXLA3_ORYSJ (Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.324e-11 Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 3 Query: 414 VSCSYPYKNITIKIDEKSDYPHYLGFIIWYQQGKKDTTAVQLCETTNFACKLLDRSHGAVWTTTSPPSGPLSLRMLFSDEDGDDESWVVPVNNI-PQDWKAGKPYDTGVQV 743 + C Y KN++I ++E+S P+ L YQ G+ D AV + + + + + R +G VW+ P+GPL R + + G D WV + P +W+ G+ YDTG ++ Sbjct: 151 IPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGPVWSIDRAPNGPLQFRAVVT--GGYDGKWVWADREVLPANWQPGQVYDTGARI 259 The following BLAST results are available for this feature:
BLAST of DY306027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306027 ID=DY306027; Name=DY306027; organism=Citrus sinensis; type=EST; length=1276bpback to top |