DY306025

Overview
NameDY306025
Unique NameDY306025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1104
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306025 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.310e-34
Identity = 101/311 (32.48%), Postives = 149/311 (47.91%), Query Frame = 1
Query:    4 AVQVTELADGVFVGCTVNHAVTDGTSFWHFFNTFAEITKGAKKISKVPDFSRDTVFDSPAVLKFPAG-GPAVTFSG---AVP------LRERIFHFSREAILRMKFRANKGILKSDYYKSVNNEIIGKQSNDSWKTVNGEITSLFETLLKTNANRTDEISSFQSLCAQLWRSVTRARKLESGKTTTFRMAVNCRHRLEPRLSPYYFGNLIQSIPTVASVGELLSHDLGWGAERLHKNVVAHDNETVRRGVADWESNPRLVPLGNFDGASITMGSFAKFPMYDMNLGWAPPVALKSGRGKKF*RENLTFPGK 906
            AVQVT+L DG+ +G   NHAV DGTS WHF +++AEI +GA+ IS  P   R    D+   L   A   P  T +G   A P      L E+IF FS  A+  +K RAN  ++ SD  K                                        S+FQSL + +WR VT AR L+    T F +  +CR R++P +   YFGNLIQ+I T  + G L +H   +GA  + K + AHD   +     +WE +P++    +     + +GS  +F +Y+++ G+  P  ++SG   +F      + GK
Sbjct:  150 AVQVTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEICRGAQSISTQPFLDRSKARDTRVKLDLTAPKDPNETSNGEDAANPTVEPPQLVEKIFRFSDFAVHTIKSRANS-VIPSDSSKP--------------------------------------FSTFQSLTSHIWRHVTLARGLKPEDITIFTVFADCRRRVDPPMPEEYFGNLIQAIFTGTAAGLLAAHGPEFGASVIQKAIAAHDASVIDARNDEWEKSPKIFQFKDAGVNCVAVGSSPRFRVYEVDFGFGKPETVRSGSNNRFNGMMYLYQGK 421          
BLAST of DY306025 vs. ExPASy Swiss-Prot
Match: Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.925e-26
Identity = 87/312 (27.88%), Postives = 137/312 (43.91%), Query Frame = 1
Query:    4 AVQVTELADGVFVGCTVNHAVTDGTSFWHFFNTFAEITKGAKKISKVPDFSRDTVFDSPAVLKFPAGGPAVTFSGAVPLRE-------RIFHFSREAILRMKFRANKGILKSDYYKSVNNEIIGKQSNDSWKTVNGEITSLFETLLKTNANRTDEISSFQSLCAQLWRSVTRARKLESGKTTTFRMAVNCRHRLEPRLSPYYFGNLIQSIPTVASVGELLSHDLGWGAERLHKNVVAHDNETVRRGVADWESNPRLVPLG---NFDGASITMGSFAKFPMYDMNLGWAPPVALKSGRGKKF*RENLTFPGKE 909
            A+QVTE+ DGVF+G   NH V DG S W+FF T+++I    ++ +  P   +    D    + FP   P      + P RE       R+FHF++  I  +K +                             VNGEI             R  ++SS Q++ A +WRS+ R   L   + T   +AV+ R RL P L    FG++I +     +VGEL    LGW   +++  + +  NE  R    +W  N ++   G        S+ + S  +F +YD + GW  P+A+++G       + + F G E
Sbjct:  146 ALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKICSNGQRENLQPLALKGLFVDG---MDFPIHIPVSDTETSPPSRELSPTFKERVFHFTKRNISDLKAK-----------------------------VNGEI-----------GLRDHKVSSLQAVSAHMWRSIIRHSGLNQEEKTRCFVAVDLRQRLNPPLDKECFGHVIYNSVVTTTVGELHDQGLGWAFLQINNMLRSLTNEDYRIYAENWVRNMKIQKSGLGSKMTRDSVIVSSSPRFEVYDNDFGWGKPIAVRAGPSNSISGKLVFFRGIE 414          
The following BLAST results are available for this feature:
BLAST of DY306025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DCR_ARATH1.310e-3432.48BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
Y3028_ARATH2.925e-2627.88Uncharacterized acetyltransferase At3g50280 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3BB12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306025 ID=DY306025; Name=DY306025; organism=Citrus sinensis; type=EST; length=1104bp
GCCGCCGTCCAAGTGACGGAGCTAGCTGACGGCGTCTTCGTCGGTTGTAC
GGTCAATCACGCCGTCACTGACGGTACCTCCTTTTGGCACTTCTTTAATA
CATTCGCCGAAATCACTAAAGGCGCCAAGAAAATCTCGAAAGTTCCCGAC
TTCTCCCGCGACACCGTTTTTGACTCGCCGGCGGTGCTCAAGTTCCCCGC
CGGTGGCCCCGCTGTTACTTTCTCCGGCGCGGTGCCGTTGCGTGAGAGAA
TCTTCCATTTCAGCAGGGAGGCTATTTTGAGGATGAAGTTCAGGGCTAAT
AAGGGAATTTTAAAAAGTGATTACTACAAGTCAGTAAATAACGAGATTAT
AGGCAAGCAAAGTAACGACAGTTGGAAAACGGTTAACGGAGAGATAACGT
CCCTTTTTGAGACGCTGTTAAAAACCAACGCAAATCGGACGGACGAGATT
TCTTCTTTCCAGTCACTGTGCGCTCAGCTATGGCGATCCGTGACACGTGC
GAGGAAACTCGAGTCTGGTAAAACGACGACGTTTCGCATGGCTGTGAACT
GTCGCCACAGGCTCGAGCCGCGGCTCAGTCCGTACTACTTTGGCAACTTG
ATACAGAGCATCCCGACCGTTGCTTCAGTGGGGGAACTGTTATCCCACGA
TCTGGGCTGGGGAGCCGAGCGGCTTCACAAGAACGTGGTGGCACACGATA
ATGAAACGGTGCGACGCGGTGTAGCGGACTGGGAAAGTAACCCGAGGCTG
GTTCCGCTGGGGAACTTTGACGGTGCATCAATCACGATGGGCAGCTTCGC
GAAATTCCCAATGTATGATATGAATTTGGGGTGGGCCCCGCCCGTGGCCC
TGAAGAGCGGTAGGGGCAAAAAGTTTTGACGGGAGAATCTCACCTTTCCT
GGGAAGGAAAGGAAACGGAAGCTTGTATCTTGAGGGTTGGGTTGGCCTCC
CCGAAAATATGGCCGGTTTTGAAAAAAAACTTTGAAATTCAGGGGAAAAA
CTGGCTTCGGTGTTGGATTAAAATTCCCCTTCCCCCCACCCCAGGCGCTG
GGGGGGTTATTTTTAACAGATTTTTTTTATCCAAAAAGCGTGGGGGATTT
TTTT
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