DY306015

Overview
NameDY306015
Unique NameDY306015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12098 contig Csv1_Contig12098:35..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306015 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 9.234e-73
Identity = 147/194 (75.77%), Postives = 161/194 (82.99%), Query Frame = -1
Query:  197 VWKELVRKSIAETEELKRFPTLQSDIAVAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAWK 778
            V KELVRKSI+ETEELKRFPTL SDIA AA EALE+FRDESRKTVLRLVDMESSYLTVEFFRKL  +PE+        +K  P RNAP P   N + +SD HFR+IGSNVS YI MVCDTL+NS+PKAVVYCQV  AKRSLLN FYA VGR+EKE+LG MLDEDPQLM+RR TLAKRLELYK ARD+IDAVAWK
Sbjct:  433 VLKELVRKSISETEELKRFPTLASDIAAAANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEK--------EKPNP-RNAPAP---NADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLELYKQARDDIDAVAWK 614          
BLAST of DY306015 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.691e-58
Identity = 117/193 (60.62%), Postives = 148/193 (76.68%), Query Frame = -1
Query:  200 VWKELVRKSIAETEELKRFPTLQSDIAVAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 778
            V KELVRKSI+ETEELKRFP+LQ ++A AA  +LEKFR+ES+K+V+RLVDMES+YLT EFFRKL ++ ER  +  N+ ++ A       P     +++ D HFRRI SNVS Y+ MV DTL+N+IPKA VYCQV  AK +LLN FY+ + ++E ++LG++LDEDP LMDRR   AKRLELYK ARDEIDAVAW
Sbjct:  438 VLKELVRKSISETEELKRFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRKLPQEIERPVT--NSKNQTAS------PSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAVAW 622          
BLAST of DY306015 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 4.034e-52
Identity = 110/193 (56.99%), Postives = 140/193 (72.54%), Query Frame = -1
Query:  200 VWKELVRKSIAETEELKRFPTLQSDIAVAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 778
            + KELVRK+IAETEELKRFP+LQ ++  AA  +L+KFR+ES K+VLRLVDMESSYLTV+FFRKL  + +  +    +S  +A D+            + D HFR+I SNV+ YI MV +TL N+IPKAVV+CQV  AK SLLN FYA + + + +RLG++LDE+P LM+RR   AKRLELYK ARDEIDA  W
Sbjct:  433 ILKELVRKAIAETEELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKLHVESQNMSL---SSPTSAIDQ------------YGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVW 610          
BLAST of DY306015 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.028e-47
Identity = 95/193 (49.22%), Postives = 134/193 (69.43%), Query Frame = -1
Query:  200 VWKELVRKSIAETEELKRFPTLQSDIAVAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 778
            + K+L+ KS+ ET ELK++PTL+ +++ AA ++L++ RDESRK  L LVDMES YLTVEFFRKL +  E+  +                P     +R++D + RRIGSNV  Y+ MVC  L+NSIPK++VYCQV  AKRSLL+ F+  +G++E  +L K+LDEDP +  RR ++AKRLELY+ A+ +I+AVAW
Sbjct:  432 ILKDLIHKSMGETSELKQYPTLRVEVSGAAVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQDSEKGGN----------------PTHSIFDRYNDAYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIAKRLELYRSAQTDIEAVAW 608          
BLAST of DY306015 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.485e-46
Identity = 94/193 (48.70%), Postives = 133/193 (68.91%), Query Frame = -1
Query:  200 VWKELVRKSIAETEELKRFPTLQSDIAVAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 778
            + K+LV KS+ ET ELK++P L+ ++  AA E+L+K R+ S+K  L+LVDME SYLTV+FFRKL +  E+  +                P     +R++D + RRIGSNV  Y+ MVC  L+NSIPK++VYCQV  AKRSLL+ F+A +G  + +RL  +L+EDP +M+RR+ ++KRLELY+ A+ EIDAVAW
Sbjct:  432 ILKDLVHKSVNETVELKQYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGN----------------PTHSIFDRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAW 608          
BLAST of DY306015 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.532e-46
Identity = 91/191 (47.64%), Postives = 133/191 (69.63%), Query Frame = -1
Query:  200 KELVRKSIAETEELKRFPTLQSDIAVAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 772
            K+LV K+I+ET +LK++P L+ ++  AA ++LE+ RDES++  L+LVDME  YLTV+FFRKL +  ++  +                P     +R++D + RRIG+ +  Y+ MVC TL+NSIPK++VYCQV  AKRSLL+ F+  +G+ E +RL  +L+EDP +M+RR+ LAKRLELY+ A+ EIDAVAW
Sbjct:  434 KDLVHKAISETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGN----------------PTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAW 608          
BLAST of DY306015 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.237e-45
Identity = 88/191 (46.07%), Postives = 133/191 (69.63%), Query Frame = -1
Query:  200 KELVRKSIAETEELKRFPTLQSDIAVAATEALEKFRDESRKTVLRLVDMESSYLTVEFFRKLSEQPERSASDKNASDKNAPDRNAPPPGPQNPERFSDYHFRRIGSNVSGYIGMVCDTLKNSIPKAVVYCQVLAAKRSLLNQFYAHVGRQEKERLGKMLDEDPQLMDRRATLAKRLELYKFARDEIDAVAW 772
            K+LV K+++ET +LK++P L+ ++  A+ ++LE+ RDES++  L+LVDME  YLTV+FFRKL +  ++  +                P     +R++D + RRIG+ +  Y+ MVC TL++SIPK++VYCQV  AKRSLL+ F+  +G+ E +RL  +L+EDP +M+RR+ LAKRLELY+ A+ EIDAVAW
Sbjct:  434 KDLVHKAMSETLDLKQYPGLRVEVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGN----------------PTHSICDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAW 608          
The following BLAST results are available for this feature:
BLAST of DY306015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DRP1C_ARATH9.234e-7375.77Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1E_ARATH1.691e-5860.62Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH4.034e-5256.99Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
DRP1B_ARATH1.028e-4749.22Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
DRP1A_ARATH1.485e-4648.70Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
SDL5A_SOYBN2.532e-4647.64Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN6.237e-4546.07Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3BA09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306015 ID=DY306015; Name=DY306015; organism=Citrus sinensis; type=EST; length=778bp
AAAGGGCAACTGAGTAATGATATTAAATGCTAATTTCAAGCTCTCAAATA
CATAGATCAAATTTGACTGTGATTATTATCAAGTACAAAAAGAATGAGCA
AGTAGTTCAATAATGGAGCAAACCTACAGTGTGATATAGCTTACATGGAA
AAAATCGTGCTCCGGTGTCATATCTCATGCAATACAATTTCAATCATTTC
CATGCTACAGCATCAATCTCATCTCTAGCAAATTTGTACAGTTCGAGCCT
TTTAGCGAGGGTGGCCCTCCTATCCATGAGCTGTGGGTCCTCATCCAACA
TTTTACCAAGTCGCTCCTTCTCCTGCCTCCCGACATGCGCATAGAATTGG
TTTAGCAATGATCTCTTGGCAGCAAGTACTTGACAATACACCACAGCCTT
GGGAATAGAATTCTTCAGTGTATCGCAAACCATGCCAATATAACCACTGA
CATTTGACCCAATTCTCCTAAAATGATAGTCAGAAAAACGTTCTGGATTT
TGTGGTCCTGGTGGGGGTGCATTCCTGTCTGGTGCATTCTTGTCTGATGC
ATTTTTATCAGATGCACTCCTCTCCGGTTGTTCACTAAGCTTCCGGAAAA
ATTCAACTGTGAGGTAGCTAGACTCCATATCCACGAGCCTTAAAACTGTT
TTCCGGCTTTCATCACGAAATTTTTCCAAAGCTTCTGTTGCTGCAACAGC
TATGTCAGATTGAAGAGTCGGAAACCGCTTTAACTCCTCTGTTTCGGCTA
TTGATTTCCGTACAAGTTCCTTCCACAC
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