DY305944

Overview
NameDY305944
Unique NameDY305944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1255
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13643 contig Csv1_Contig13643:1..1259. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305944 vs. ExPASy Swiss-Prot
Match: PANK2_ARATH (Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 6.227e-68
Identity = 138/201 (68.66%), Postives = 156/201 (77.61%), Query Frame = -1
Query:  374 KPWGGGGFDASRERR*GLVATSFATIRE--LYVVDTSVLMCSGDATPAKGTTKT*N*SVFVANPLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKNADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEP 970
            +PW    FDA +ER  G         +   L+V ++   +  G    A+   +     V VAN LPALND+TAMELPDIVA AAKHCDILRRAAE GGLLVDAM+N  DGSK++S S PLMVVENGCGSPCIDLRQVSSELAAAAK+ADL++LEGMGRALHTNFNA+F+CEALKLAMVKNQRLAEKLIKGNIYDCVCRYEP
Sbjct:  667 RPWRVDDFDAFKERMLGSGGKQPHRHKRALLFVDNSGADVILGMLPLAREFLRRGTEVVLVANSLPALNDVTAMELPDIVAGAAKHCDILRRAAEMGGLLVDAMVNPGDGSKKDSTSAPLMVVENGCGSPCIDLRQVSSELAAAAKDADLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEP 867          
BLAST of DY305944 vs. ExPASy Swiss-Prot
Match: Y2734_ARATH (Uncharacterized protein At2g17340 OS=Arabidopsis thaliana GN=At2g17340 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.653e-18
Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = -1
Query:  380 VFVANPLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKNADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRY 802
            V  AN LP++NDIT  EL +I+++            E G LL       +D SK       L++  +G   P IDL +VS ELA  + +ADL+I+EGMGR + TN  A+FKC++LK+ MVK+  +AE  + G +YDCV ++
Sbjct:  245 VLAANELPSINDITCTELTEILSQLKD---------ENGQLL------GVDTSK-------LLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAE-FLGGRLYDCVFKF 362          
BLAST of DY305944 vs. ExPASy Swiss-Prot
Match: PANK4_PONAB (Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.436e-16
Identity = 51/144 (35.42%), Postives = 82/144 (56.94%), Query Frame = -1
Query:  377 VFVANPLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 802
            +   N  PALND+T             H + L  A    G+  D ++++    +       L++V+ G  SPC+DL ++   LAA  +   ADL+++EGMGRA+HTN++A  +CE+LKLA++KN  LAE+L  G ++  + +YE
Sbjct:  648 ILACNSGPALNDVT-------------HSESLIVAERIAGM--DPVVHSALREER------LLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERL-GGRLFSVIFKYE 769          
BLAST of DY305944 vs. ExPASy Swiss-Prot
Match: PANK4_HUMAN (Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.436e-16
Identity = 51/144 (35.42%), Postives = 82/144 (56.94%), Query Frame = -1
Query:  377 VFVANPLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 802
            +   N  PALND+T             H + L  A    G+  D ++++    +       L++V+ G  SPC+DL ++   LAA  +   ADL+++EGMGRA+HTN++A  +CE+LKLA++KN  LAE+L  G ++  + +YE
Sbjct:  648 ILACNSGPALNDVT-------------HSESLIVAERIAGM--DPVVHSALQEER------LLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERL-GGRLFSVIFKYE 769          
BLAST of DY305944 vs. ExPASy Swiss-Prot
Match: PANK4_MACFA (Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 6.116e-15
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = -1
Query:  377 VFVANPLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 802
            +   N  PALND+T             H + L  A    G+  D ++++    +       L++V+ G  SPC+DL ++   LAA  +   ADL+++EGMGRA+HTN++A   CE+LKLA++KN  LAE+L  G ++  + +YE
Sbjct:  648 ILACNSGPALNDVT-------------HGESLIVAERIAGM--DPVVHSALREER------LLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALCCESLKLAVIKNAWLAERL-GGRLFSVIFKYE 769          
BLAST of DY305944 vs. ExPASy Swiss-Prot
Match: PANK4_RAT (Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.988e-15
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = -1
Query:  377 VFVANPLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 802
            +   N  PALND+T  E   IVAE         R A    ++  A+       +E+     L++V+ G   PC+DL ++   LA   +   ADL+++EGMGRA+HTN++A  +CE+LKLA+VKN  LAE+L  G ++  + +YE
Sbjct:  648 ILACNSGPALNDVTYSESL-IVAE---------RIAAMDPIICTAL-------REDR----LLLVQTGSSPPCLDLSRLDKGLAVLVRERGADLVVIEGMGRAVHTNYHALLRCESLKLAVVKNAWLAERL-GGQLFSVIFKYE 769          
The following BLAST results are available for this feature:
BLAST of DY305944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PANK2_ARATH6.227e-6868.66Pantothenate kinase 2 OS=Arabidopsis thaliana GN=A... [more]
Y2734_ARATH2.653e-1840.43Uncharacterized protein At2g17340 OS=Arabidopsis t... [more]
PANK4_PONAB9.436e-1635.42Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=... [more]
PANK4_HUMAN9.436e-1635.42Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=... [more]
PANK4_MACFA6.116e-1535.42Pantothenate kinase 4 OS=Macaca fascicularis GN=PA... [more]
PANK4_RAT7.988e-1537.50Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM2DH09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305944 ID=DY305944; Name=DY305944; organism=Citrus sinensis; type=EST; length=1255bp
GATTTAAAATTCGTTGAATTAAAAATGAAAAATAAATTCACACAAAACAT
GAACAATTCAACAATAAATTACAACCTTCAACTTATCCATAAGATCTACA
AATACATTTCTCCAAATACAATTGGTCATCAATTTTGCTTCTTCCATGAT
TTGTGGTCCTCCGCTGCTACCTTATGTTGACTGTTGTATCGTTTATGGCC
TATTCCACCTTATTATTTCTTATTTATTTTTCAAGATCACATGAAACAAA
GACTGCTGGACCATTGTCAAATGGTGTGGACTGAGGATGTATATATTTGT
CCTGCTCATCAAATTCTGATCTAATCTGCCGCCCCAAGATGAAACAGTAT
AATTGAATGCAAGATTATCTGGCTGGCTCATATCTGCAAACACAGTCGTA
TATGTTCCCTTTGATCAATTTTTCTGCAAGCCTCTGATTCTTCACCATTG
CAAGCTTCAAAGCCTCACATTTAAACCGAGCATTGAAGTTGGTATGAAGA
GCTCTACCCATCCCTTCCAAAATAATCAGATCAGCATTTTTTGCAGCAGC
AGCTAGCTCAGAGCTGACTTGCCTCAGATCTATGCAAGGGCTTCCACAGC
CATTCTCAACAACCATCAGAGGAACTGAAGGTGAATTCTCTTTAGAACCA
TCTAGGGTGTTAATCATTGCATCCACAAGTAAACCTCCTGCCTCAGCAGC
CCTACGAAGAATGTCACAATGCTTTGCAGCCTCAGCTACAATATCGGGGA
GCTCCATGGCAGTTATATCGTTTAGTGCAGGGAGGGGATTTGCAACAAAA
ACACTTCAGTTTCACGTCTTAGTAGTTCCCTTGGCAGGGGTAGCATCCCC
AGAACACATCAGCACCGAAGTGTCCACAACATAAAGCTCTCTAATGGTGG
CAAAGCTTGTTGCCACCAGACCCTACCTTCTCTCCCTTGAGGCATCAAAT
CCTCCACCCCCCCAGGGCTTTGCATTTAATTGACACCATTCCGTAAATTT
CAAAAATTGTCCCTTTTTGGAAAAAAAATCCAACAGGCCCGGGGATCCCC
CTCTCAAAAAATTTGGGGGCAAAAAACCCCCTCAAAAAAAAAAAAAAACC
CTTGGCTCCCCTCCCATCACCGGTAACAGTTCCCCCCCCATTAAATCACG
AGGAAAAAAAACAAAAAGAAAACCCCCTCCTTTTTCCCCCCTCCCCCCTT
TTTTTCCTTCTTCTTTATGGGGCCCCCCCCCAAAAAAAAAATAGTAAAAC
ACCAC
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