DY305940

Overview
NameDY305940
Unique NameDY305940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6786 contig Csv1_Contig6786:1..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.011e-36
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 2
Query:  167 SSIIVYDKFFSWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLM--PAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISAK 598
            ++ IV      +QVYSQPIFA  E+ + +K+PEN F+   +  K PL+     R NP+R+C RT+YV+  T +A+ FPYFN+VLGV+G + FWPL +YFPVEM   Q  I +WTR W++LR FS+VC +V    LVGSI G++ AK
Sbjct:  320 NACIVLHLVGGYQVYSQPIFAAAERSLTKKYPENKFIARFYGFKLPLLRGETVRLNPMRMCLRTMYVLITTGVAVMFPYFNEVLGVVGALAFWPLAVYFPVEMCILQKKIRSWTRPWLLLRGFSFVCLLVCLLSLVGSIYGLVGAK 465          

HSP 2 Score: 82.8037 bits (203), Expect = 2.193e-15
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1
Query:    1 GNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEKWICE---ENGFL 159
            GNLLTGFGFYEP+WL+D ANA IV+HLVGGYQVYSQPIFA  E+ + +   EN F+
Sbjct:  301 GNLLTGFGFYEPFWLVDFANACIVLHLVGGYQVYSQPIFAAAERSLTKKYPENKFI 356          
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.743e-32
Identity = 61/144 (42.36%), Postives = 97/144 (67.36%), Query Frame = 2
Query:  161 IMSSIIVYDKFFSWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLK-PPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGII 589
            I ++ IV     ++QV++QPIFA  EK + E++P+N FL+ EF ++ P     ++ N  R+ +R+ +VV+ T I+M  P+FN V+G++G + FWPLT+YFPVEMY KQ  +E W+ +WV L++ S  C ++S    VGSI G++
Sbjct:  337 IANAAIVVHLVGAYQVFAQPIFAFIEKSVAERYPDNDFLSKEFEIRIPGFKSPYKVNVFRMVYRSGFVVTTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIKQRKVEKWSTRWVCLQMLSVACLVISVVAGVGSIAGVM 480          

HSP 2 Score: 85.8853 bits (211), Expect = 2.590e-16
Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query:    1 GNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEKWICE---ENGFLNNEF 171
            GNLLTGFGFY P+WL+D+ANA IV+HLVG YQV++QPIFA  EK + E   +N FL+ EF
Sbjct:  320 GNLLTGFGFYNPFWLLDIANAAIVVHLVGAYQVFAQPIFAFIEKSVAERYPDNDFLSKEF 379          
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.413e-30
Identity = 59/133 (44.36%), Postives = 86/133 (64.66%), Query Frame = 2
Query:  197 SWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISA 595
            ++QV++QPIF   EK     +P+N F+ +E+ +  P +  F  +  RL +RT YVV  T +AM FP+FN +LG+IG   FWPLT+YFPVEM+  Q  I+ ++ +W+ L+   YVC IVS     GSI G+IS+
Sbjct:  341 AYQVFAQPIFQFVEKKCNRNYPDNKFITSEYSVNVPFLGKFNISLFRLVWRTAYVVITTVVAMIFPFFNAILGLIGAASFWPLTVYFPVEMHIAQTKIKKYSARWIALKTMCYVCLIVSLLAAAGSIAGLISS 473          

HSP 2 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    1 GNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEKWICEENGFLNNEF 171
            G+ LT FGF+EP+WLID ANA I +HL+G YQV++QPIF   EK  C  N + +N+F
Sbjct:  312 GDFLTDFGFFEPFWLIDFANACIAVHLIGAYQVFAQPIFQFVEK-KCNRN-YPDNKF 366          
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.668e-29
Identity = 59/133 (44.36%), Postives = 88/133 (66.17%), Query Frame = 2
Query:  197 SWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISA 595
            ++QVY+QP F   E+   +K+P++ F+N E+  K PL+   R N  RL +RT YVV  T +AM FP+FN +LG++G   FWPLT+YFPV M+  Q  ++ ++R+W+ L +   VC IVS    VGSI G+I++
Sbjct:  332 AYQVYAQPFFQFVEENCNKKWPQSNFINKEYSSKVPLLGKCRVNLFRLVWRTCYVVLTTFVAMIFPFFNAILGLLGAFAFWPLTVYFPVAMHIAQAKVKKYSRRWLALNLLVLVCLIVSALAAVGSIIGLINS 464          

HSP 2 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 1
Query:    1 GNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFE-----KWICEENGFLNNEF 171
            G+ LT FGFYEPYWLID ANA I +HL+G YQVY+QP F   E     KW   ++ F+N E+
Sbjct:  303 GDFLTDFGFYEPYWLIDFANACIALHLIGAYQVYAQPFFQFVEENCNKKW--PQSNFINKEY 362          
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.484e-29
Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 2
Query:  161 IMSSIIVYDKFFSWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGII 589
            I ++ IV     ++QVY QP+FA  EK    +FP++ F+  +  +  P     R N  RL +RTV+V+  T I+M  P+FN V+G++G + FWPLT+YFPVEMY  Q  I  W+ +WV L+VFS  C +VS     GSI G++
Sbjct:  321 IANAAIVIHLIGAYQVYCQPLFAFIEKQASIQFPDSEFIAKDIKIPIPGFKPLRLNVFRLIWRTVFVIITTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPRWSTRWVCLQVFSLGCLVVSIAAAAGSIAGVL 463          

HSP 2 Score: 79.7221 bits (195), Expect = 1.856e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1
Query:    1 GNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEK 132
            GNLLTGFGFY PYWL+D+ANA IVIHL+G YQVY QP+FA  EK
Sbjct:  304 GNLLTGFGFYNPYWLLDIANAAIVIHLIGAYQVYCQPLFAFIEK 347          
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.762e-29
Identity = 65/146 (44.52%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  161 IMSSIIVYDKFFSWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPA--FRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIIS 592
            I +  IV     ++QVY QP+FA  EK    +FPE+ F+  E  +K  L P   F  N  RL +RT +V++ T I+M  P+FN V+G++G + FWPLT+YFPVEMY  Q N+  W  KWV L+V S  C  VS     GS+ GI+S
Sbjct:  325 IANLAIVIHLVGAYQVYCQPLFAFVEKEASRRFPESEFVTKE--IKIQLFPGKPFNLNLFRLVWRTFFVMTTTLISMLMPFFNDVVGLLGAIGFWPLTVYFPVEMYIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGIVS 468          
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.031e-28
Identity = 57/133 (42.86%), Postives = 82/133 (61.65%), Query Frame = 2
Query:  197 SWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLKPPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGIISA 595
            ++QV+ QPIF   E    +++P+N F+  E+ +  P    F  N LRL +RT YVV    +AM FP+FN  LG+IG   FWPLT+YFP+EM+  Q  I  ++  W  L++ S+ CFIVS     GS+QG+I +
Sbjct:  339 AYQVFCQPIFQFVESQSAKRWPDNKFITGEYKIHVPCCGDFSINFLRLVWRTSYVVVTAVVAMIFPFFNDFLGLIGAASFWPLTVYFPIEMHIAQKKIPKFSFTWTWLKILSWTCFIVSLVAAAGSVQGLIQS 471          

HSP 2 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 1
Query:    1 GNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFE-----KWICEENGFLNNEF 171
            GN LTGFGFYEP+WLID AN  I +HL+G YQV+ QPIF   E     +W   +N F+  E+
Sbjct:  310 GNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFQFVESQSAKRW--PDNKFITGEY 369          
BLAST of DY305940 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.261e-27
Identity = 55/144 (38.19%), Postives = 91/144 (63.19%), Query Frame = 2
Query:  161 IMSSIIVYDKFFSWQVYSQPIFAHFEKWICEKFPENGFLNNEFFLK-PPLMPAFRWNPLRLCFRTVYVVSVTAIAMSFPYFNQVLGVIGGVIFWPLTIYFPVEMYFKQMNIEAWTRKWVMLRVFSYVCFIVSTFGLVGSIQGII 589
            + ++ IV     ++QV++QPIFA  EK    +FP++  +  E+ ++ P     ++ N  R  +R+ +VV  T I+M  P+FN V+G++G + FWPLT+YFPVEMY +Q  +E W+ KWV L++ S  C +++    VGSI G++
Sbjct:  310 VANAAIVIHLVGAYQVFAQPIFAFIEKQAAARFPDSDLVTKEYEIRIPGFRSPYKVNVFRAVYRSGFVVLTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIRQRKVERWSMKWVCLQMLSCGCLMITLVAGVGSIAGVM 453          

HSP 2 Score: 78.1814 bits (191), Expect = 5.400e-14
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1
Query:    1 GNLLTGFGFYEPYWLIDLANAFIVIHLVGGYQVYSQPIFAHFEK 132
            GNLLTGFGFY P+WL+D+ANA IVIHLVG YQV++QPIFA  EK
Sbjct:  293 GNLLTGFGFYNPFWLLDVANAAIVIHLVGAYQVFAQPIFAFIEK 336          
The following BLAST results are available for this feature:
BLAST of DY305940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
AAP7_ARATH1.011e-3649.32Probable amino acid permease 7 OS=Arabidopsis thal... [more]
AAP2_ARATH5.743e-3242.36Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH2.413e-3044.36Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH2.668e-2944.36Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP3_ARATH3.484e-2942.66Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP5_ARATH7.762e-2944.52Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
AAP6_ARATH5.031e-2842.86Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH3.261e-2738.19Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM2DH03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305940 ID=DY305940; Name=DY305940; organism=Citrus sinensis; type=EST; length=752bp
GGGAACCTCCTAACAGGATTCGGATTTTACGAGCCATACTGGCTTATTGA
CTTGGCTAATGCTTTTATCGTGATTCATCTAGTTGGAGGGTATCAGGTTT
ATAGTCAGCCAATATTTGCCCATTTTGAAAAATGGATTTGTGAGGAGAAT
GGATTCTTGAATAATGAGTTCTATCATTGTTTATGATAAATTTTTTTCTT
GGCAGGTTTACAGTCAGCCAATATTTGCCCATTTTGAAAAATGGATTTGT
GAGAAGTTTCCAGAGAATGGATTCTTGAATAATGAGTTCTTTTTGAAACC
ACCGCTGATGCCAGCTTTCAGATGGAACCCTCTCAGACTGTGTTTCCGAA
CTGTTTATGTTGTGTCTGTGACGGCAATTGCAATGAGCTTCCCTTACTTC
AATCAGGTTCTAGGAGTGATAGGAGGAGTGATATTTTGGCCCTTAACGAT
ATACTTCCCTGTGGAGATGTACTTTAAGCAGATGAACATTGAAGCTTGGA
CAAGAAAGTGGGTAATGCTTCGAGTTTTTAGCTACGTGTGCTTCATTGTG
TCAACTTTTGGGTTGGTCGGATCAATCCAAGGAATTATAAGTGCAAAATT
AAGCTAAGAAAAGGTACGGTTCATATAGGCTTATGTAATATAAGATGAAT
AATAGCTGAAGATTTAGTGATGATGGATCAGATTTTATTGGTCATGATGC
AGGCATCTCTAAATTTTATTGGAGAAGCCATGTAATATATCAGTGTCTTT
TC
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