DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2M_ARATH (NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana GN=ND2 PE=2 SV=2) HSP 1 Score: 302.753 bits (774), Expect = 3.992e-83 Identity = 171/240 (71.25%), Postives = 175/240 (72.92%), Query Frame = 3 Query: 192 HMFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWLFHDLWVYWSY------PLPSITPDFERITNHWCSIYC*FYWGFSLFAVRSLFKITA 893 HMFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPL SNVGW HLFWNN FRRDNFTYFCQI LLLSTAGTISMCFDFF+QERFDAFEFIVLILLSTC MLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGIL LF +Y S L I +E IT S + G AV LFKITA Sbjct: 11 HMFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTIAHLFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDFFDQERFDAFEFIVLILLSTCGMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGIL---LFGCSMIYGSTGATHFDQLAKILTGYE-ITGARSS---GIFMGILFIAVGFLFKITA 243 HSP 2 Score: 28.4906 bits (62), Expect = 3.992e-83 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 164 MKAEFVRILPHVQSFF 211 MKAEFVRILPH+ + F Sbjct: 1 MKAEFVRILPHMFNLF 16
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2M_OENBE (NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera bertiana GN=ND2 PE=2 SV=2) HSP 1 Score: 303.138 bits (775), Expect = 2.301e-81 Identity = 173/239 (72.38%), Postives = 177/239 (74.06%), Query Frame = 3 Query: 195 MFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWLFHDLWVYWSY------PLPSITPDFERITNHWCSIYC*FYWGFSLFAVRSLFKITA 893 MFNLFLAVFPEIFIINATFILLIHGVVFSTSKK DYPPLVSNVGW HLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYV+AASKRKSEFSTEAGLKYLILGAFSSGIL LF +Y S L I +E IT S + G AV LFKITA Sbjct: 1 MFNLFLAVFPEIFIINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVLAASKRKSEFSTEAGLKYLILGAFSSGIL---LFGCSMIYGSTGATHFDQLAKILTGYE-ITGARSS---GIFMGILFIAVGFLFKITA 232
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2M_MARPO (NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha GN=ND2 PE=3 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 6.960e-62 Identity = 140/233 (60.09%), Postives = 158/233 (67.81%), Query Frame = 3 Query: 207 FLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWLFHDLWVYWSYPLPSITPDFERITNHWCSIY----C*FYWGFSLFAVRSLFKITA 893 FLA+FPEIF+INAT ILLI+GVVFSTSKKYDYPPLV NVGW +L +NN DNFTYFCQI LLLSTA T+ MC D+F+QE +AFE IVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKR SEFSTEAGLKY ILGAFSSGIL LF +Y + + + T + +++ + G AV LFKITA Sbjct: 6 FLALFPEIFLINATIILLIYGVVFSTSKKYDYPPLVRNVGWLGLLSVLITILLVAVGSPLAVA-NLVYNNLII-DNFTYFCQIFLLLSTASTMVMCLDYFKQESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRDSEFSTEAGLKYFILGAFSSGIL---LFGCSMIYGFTGVTNFEELAKIFTGYEITLFGAQSSGIFMGILFIAVGFLFKITA 233
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2M_CHOCR (NADH-ubiquinone oxidoreductase chain 2 OS=Chondrus crispus GN=ND2 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.599e-34 Identity = 90/229 (39.30%), Postives = 129/229 (56.33%), Query Frame = 3 Query: 216 VFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWLFHDLWVYWSYPLPS---ITPDFERITNHWCSIYC*FYWGFSLFAVRSLFKITA 893 + PEIFI++ ILL++GV+FS+S K YP L N+G W++FF D FT+ + L+ L G I + F + ER ++FE+ +LILL+ ++LF+I +YDL+ MYL+IE QSL FY++A+ KR SEFSTEAGLKY +LGAFSSG+L LF +Y L + + F + S + GF+L V LFK++A Sbjct: 11 ILPEIFILSNVCILLVYGVLFSSSIKLGYPLLAQNLGLLSCQILGCSFIITYYQTFLNLSS---WSDFFINDIFTFKTKCLIFLMCLGWILITFSYINYERINSFEYWILILLAIVAILFIIQSYDLLTMYLSIEFQSLIFYILASFKRTSEFSTEAGLKYFVLGAFSSGLL---LFGSSLIYGLTGLTNFLDLAKFFTGMPMLELSSWIGLTTGFTLILVSLLFKLSA 233
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_RHIEC (NADH-quinone oxidoreductase subunit N OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=nuoN PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 9.413e-24 Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 402 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 L + + D F+ F +++ L+ + + M + + D FEF VL++L+T +L MISA DLI++YLA+ELQSL YV+AA R S STEAGLKY +LGA SSG+LL Sbjct: 64 LAFGGVYMADGFSRFMKLVALIGSLVALFMTMGHARENQLDKFEFPVLLVLATLGILLMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAGLKYFVLGALSSGMLL 174 HSP 2 Score: 33.4982 bits (75), Expect = 9.413e-24 Identity = 15/33 (45.45%), Postives = 23/33 (69.70%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQILNG*QITGARSI 834 +G S++YG TG THF ++ Q L+ + GARS+ Sbjct: 175 YGMSLVYGFTGHTHFTEIAQALS---VEGARSL 204
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_RHOCS (NADH-quinone oxidoreductase subunit N OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=nuoN PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.704e-22 Identity = 52/105 (49.52%), Postives = 76/105 (72.38%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F D+F F ++L+L +TA T+ + ++ E+E+ D FE+ VL+LL+T M+ M+SA DLI++Y+ +ELQSL YVIAA +R S+EAGLKY +LG+ SS ILL Sbjct: 68 FIADDFAVFAKVLILTATALTVVLSVNYLEREQMDRFEYPVLMLLATVGMMLMVSANDLISLYVGLELQSLSLYVIAAFRRDYAKSSEAGLKYFLLGSLSSCILL 172 HSP 2 Score: 25.409 bits (54), Expect = 1.704e-22 Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQL 789 +G S+IYG +G T+F +L Sbjct: 173 YGASLIYGFSGTTNFERL 190
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_PARL1 (NADH-quinone oxidoreductase subunit N OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=nuoN PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.751e-22 Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 + F D FT F ++L+LL+ A I M F +E D FE+ VLI+L+T M M+SA LI++Y+ +ELQSL YVIAA R + +TEAGLKY +LGA +SG+LL Sbjct: 68 FGGMFVIDGFTKFMKLLILLAAAAAIVMSLTFIRREGMDRFEYPVLIILATLGMFMMVSANGLISLYMGLELQSLSLYVIAAFHRDNTRATEAGLKYFVLGALASGMLL 176 HSP 2 Score: 25.0238 bits (53), Expect = 3.751e-22 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQIL 801 +G S+IYG TG+ F + +L Sbjct: 177 YGASLIYGFTGSVQFGSIATVL 198
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_BARBK (NADH-quinone oxidoreductase subunit N OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=nuoN PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.146e-20 Identity = 46/110 (41.82%), Postives = 74/110 (67.27%), Query Frame = 3 Query: 405 FWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F+ N D F+ + +IL L+ ++ + F ++FD FEF +L+LL+T M+ MIS+ +++++Y+ +ELQSL YV+AA R + S+EAG+KY +LGA SSG+LL Sbjct: 66 FYTNALIIDAFSRYMKILTLIGALFSLILSVGFSSSQKFDIFEFPILVLLATLGMMLMISSGNMLSLYMGLELQSLALYVLAAIHRDNVKSSEAGIKYFVLGALSSGLLL 175 HSP 2 Score: 26.9498 bits (58), Expect = 1.146e-20 Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQILNG 807 +G S++YG TG F ++ LNG Sbjct: 176 YGISLLYGFTGQIGFREISSALNG 199
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_PARDP (NADH-quinone oxidoreductase subunit N OS=Paracoccus denitrificans (strain Pd 1222) GN=nuoN PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.734e-20 Identity = 46/109 (42.20%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 ++ F D F+ F +++ L++ AG ++M D+ ++ FEF +++ L+ M+FM+SA DL+ +Y+ +ELQSL YV+AA +R S S+EAGLKY +LG+ SSG+LL Sbjct: 64 FHGMFIDDGFSRFAKVVTLVAAAGVLAMSADYMQRRNMLRFEFPIIVALAVLGMMFMVSAGDLLTLYMGLELQSLALYVVAAMRRDSVRSSEAGLKYFVLGSLSSGLLL 172
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NQO14_PARDE (NADH-quinone oxidoreductase subunit 14 OS=Paracoccus denitrificans GN=nqo14 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.734e-20 Identity = 46/109 (42.20%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 ++ F D F+ F +++ L++ AG ++M D+ ++ FEF +++ L+ M+FM+SA DL+ +Y+ +ELQSL YV+AA +R S S+EAGLKY +LG+ SSG+LL Sbjct: 64 FHGMFIDDGFSRFAKVVTLVAAAGVLAMSADYMQRRNMLRFEFPIIVALAVLGMMFMVSAGDLLTLYMGLELQSLALYVVAAMRRDSVRSSEAGLKYFVLGSLSSGLLL 172 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |