DY305921

Overview
NameDY305921
Unique NameDY305921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1225
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305921 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 2.528e-82
Identity = 135/215 (62.79%), Postives = 165/215 (76.74%), Query Frame = 3
Query:   99 LCFFNFPITR-AASDSAYESFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGGGSF 740
            L F + P++  + S+S Y SFL+C + +T S   QI++ V +QTN +++SVLRAYIRNARFN SSTLKPT+IITP  E+HVSAAV CSK + F LKIRSGGHDY+GLSYISD+PFFILDM N+R + VD+   SAW+ AGATLGE+YYRIW+KS++HG+PAGVCPTV            NM+RKFGLS D V DAKIVDV GR+LDRKAMG   F
Sbjct:   19 LLFLSLPLSSFSQSNSVYNSFLKCFSDKTKSPQSQITDNVFSQTNPAFSSVLRAYIRNARFNTSSTLKPTIIITPRSESHVSAAVTCSKTLNFLLKIRSGGHDYDGLSYISDKPFFILDMSNIRDVSVDIASNSAWISAGATLGEVYYRIWEKSRVHGFPAGVCPTVGVGGHLSGGGYGNMVRKFGLSVDYVEDAKIVDVNGRVLDRKAMGEDLF 233          

HSP 2 Score: 51.6026 bits (122), Expect = 2.528e-82
Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 2
Query:  770 SFGVVLAYKIKLVPVPETVTVFKAERLLAENATDVVYNGQLGGAAND 910
            S+GVVL YK+KLVPVP  VTVF+ E+ +   A D+V+  Q  G   D
Sbjct:  243 SYGVVLGYKVKLVPVPSVVTVFRVEQYMDSGAVDMVHKWQSVGPKTD 289          
BLAST of DY305921 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.770e-45
Identity = 81/174 (46.55%), Postives = 107/174 (61.49%), Query Frame = 3
Query:  219 TQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGGGSF 740
            T TNS Y  +L A ++N  F   +  KP+ I+ P  +  +S+ V C  +  + +++RSGGH YEGLSY +D PF I+DM NL  I +DV  E+AWVE+GATLGELYY I Q +   G+ AG CPTV             M RK+GL+ DNVVDA ++D  G ILDR+ MG   F
Sbjct:   48 TDTNSDYFKLLHASMQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTADTPFVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSGGHISGGGFGMMSRKYGLAADNVVDAILIDSNGAILDREKMGDDVF 221          

HSP 2 Score: 35.039 bits (79), Expect = 1.770e-45
Identity = 16/40 (40.00%), Postives = 29/40 (72.50%), Query Frame = 2
Query:  773 FGVVLAYKIKLVPVPETVTVFKAERLLA-ENATDVVYNGQ 889
            +G + A+KIKL+PVPE +TVF+  + +  E+A+ +++  Q
Sbjct:  232 WGAIYAWKIKLLPVPEKLTVFRVTKNVGIEDASSLLHKWQ 271          

HSP 3 Score: 31.5722 bits (70), Expect = 1.770e-45
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  718 KQWGEDLFWAIRGGGG 765
            ++ G+D+FWAIRGGGG
Sbjct:  214 EKMGDDVFWAIRGGGG 229          
BLAST of DY305921 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.451e-44
Identity = 75/172 (43.60%), Postives = 106/172 (61.63%), Query Frame = 3
Query:  225 TNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGGGSF 740
            ++S +   L   I+N  F  S   KP+ II P  +  +S  + C ++  + +++RSGGH YEGLSY SD PF ++D+ NL  + +D++ E+AWVE+G+TLGELYY I + S   G+ AG CPTV             M RK+GL+ DNVVDA ++D  G ILDR+AMG   F
Sbjct:   46 SDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVF 217          

HSP 2 Score: 37.7354 bits (86), Expect = 2.451e-44
Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 2
Query:  773 FGVVLAYKIKLVPVPETVTVFKAERLLA-ENATDVVYNGQ 889
            +G + A+KIKL+PVPE VTVF+  + +A + AT +++  Q
Sbjct:  228 WGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQ 267          

HSP 3 Score: 32.3426 bits (72), Expect = 2.451e-44
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 1
Query:  727 GEDLFWAIRGGGG 765
            GED+FWAIRGGGG
Sbjct:  213 GEDVFWAIRGGGG 225          
The following BLAST results are available for this feature:
BLAST of DY305921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RETOL_ARATH2.528e-8262.79Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_PAPSO1.770e-4546.55Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
RETO_ESCCA2.451e-4443.60Reticuline oxidase OS=Eschscholzia californica GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM2DF02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305921 ID=DY305921; Name=DY305921; organism=Citrus sinensis; type=EST; length=1225bp
GTAAAAAGTTTGAATAGCAGACACGAACACGAATGGAAATGATGAAAATA
TCAACACTCTGTTCAACTTCTTTTCGGCTCTCAACGATTCTTCTAGTTCT
TTGCTTTTTCAATTTCCCCATCACACGGGCAGCTTCAGATTCGGCCTATG
AATCTTTTCTACAATGCTTAACGCAGCAAACGAACTCTTCAGACCAACAA
ATCTCAAACATTGTCGTCACTCAGACCAATTCATCGTACGCATCAGTCTT
GCGAGCGTACATCCGAAACGCCCGTTTCAACCTTTCATCAACGCTGAAAC
CCACAGTCATCATAACCCCTCTGCAGGAAGCTCACGTTTCAGCGGCCGTG
ATTTGCTCCAAACAAGTTGGCTTCCAACTCAAAATCCGCAGCGGCGGCCA
TGACTACGAGGGCTTGTCCTACATCTCCGACAGGCCCTTCTTTATCCTCG
ACATGTTCAATTTACGGTCGATTGATGTTGATGTCAAAGACGAGTCCGCT
TGGGTCGAAGCTGGCGCCACATTGGGTGAACTTTACTACAGGATTTGGCA
AAAAAGCAAACTGCACGGCTATCCTGCCGGCGTCTGCCCCACCGTCGGCG
TTGGCGGCCACTTGAGCGGCGGCGGGTACGGCAACATGTTGAGAAAATTT
GGATTGTCCACCGACAATGTTGTTGACGCCAAGATTGTTGATGTTCGGGG
GAGGATTCTCGATAGGAAAGCAATGGGGGGAGGATCTTTTTTGGGCGATC
AGAGGCGGCGGCGGAGCGAAGCTTCGGTGTTGTGCTGGCTTATAAAATCA
AGTTGGTTCCCGTTCCCGAGACCGTTACCGTGTTTAAAGCTGAAAGGCTT
TTGGCTGAGAATGCAACGGATGTGGTCTATAATGGGCAGTTGGGGGGCGC
GGCCAACGATAAAATTTGTTTAAGAAAATGCTTTTGCAGCCTGTTAAAAA
AAACAAAAACCCACGGTCAGGGCATCAATTGGGGCGTTTGTAATTAGGTG
GTGCCCAAAAGCCCCCTGGACTCCTCTGGCCCAGGGATTTTCCCAAAATT
GGGGGGCTAAAAAAAAAAAAAGGGCTTGGGAAAAAGAATTTGGAAATCAA
TCCATTTTTTTTTGGGGGGGGCCAAATTTTCAAAAAAGGGGGAACCTTTC
CCAAAAAAGGGGTTTTTTGCTTGGGAAACAAAAAAACCCTTTATAACCCC
CCCCCCTCATATATTTTTTCCCCTT
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