DY305890

Overview
NameDY305890
Unique NameDY305890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1250
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7975 contig Csv1_Contig7975:527..1776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 4.193e-47
Identity = 71/107 (66.36%), Postives = 86/107 (80.37%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTVVL+FQPAEE G GAK M+ +G +EN+EAIFG+H+    P GVVASRPG  +AG G F+A ISGKGGHAA+P H IDPILA S+ ++SLQ +VSRE DPLDSQV+
Sbjct:  160 GTVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVV 266          

HSP 2 Score: 61.2326 bits (147), Expect = 4.193e-47
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  389 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVLV 529
            QVV+V    GG ++N+IPDS T+ GTFRAF K+ FN L++RI+EV+V
Sbjct:  264 QVVTVGKFQGGGAFNVIPDSVTIGGTFRAFLKESFNQLKQRIEEVIV 310          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 4.193e-47
Identity = 71/107 (66.36%), Postives = 86/107 (80.37%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTVVL+FQPAEE G GAK M+ +G +EN+EAIFG+H+    P GVVASRPG  +AG G F+A ISGKGGHAA+P H IDPILA S+ ++SLQ +VSRE DPLDSQV+
Sbjct:  160 GTVVLVFQPAEEGGGGAKKMIDDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVV 266          

HSP 2 Score: 61.2326 bits (147), Expect = 4.193e-47
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  389 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVLV 529
            QVV+V    GG ++N+IPDS T+ GTFRAF K+ FN L++RI+EV+V
Sbjct:  264 QVVTVGKFQGGGAFNVIPDSVTIGGTFRAFLKESFNQLKQRIEEVIV 310          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 3.490e-46
Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTVVL+FQPAEE G GAK +V+ GVLENV AIFGLH+ ++   G V+SR G  LAG G FKAKISGKGGHAA+PQH IDPILA S+ ++SLQ++VSRE DPLDSQV+
Sbjct:  159 GTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPLDSQVV 265          

HSP 2 Score: 57.3806 bits (137), Expect = 3.490e-46
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 2
Query:  389 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVL 526
            QVV+VA   GG ++N+IPDS T+ GTFRAF+ K F  L++RI++V+
Sbjct:  263 QVVTVAKFEGGGAFNVIPDSVTIGGTFRAFSTKSFMQLKKRIEQVI 308          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 5.793e-43
Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTVVLIFQPAEE  +GAK M +EG L+NVEAIFG+HL  + P G  ASR G FLAG G F+A I+GKGGHAAIPQH IDP++A SS V+SLQ +VSRE DPLDS+V+
Sbjct:  162 GTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVV 268          

HSP 2 Score: 51.6026 bits (122), Expect = 5.793e-43
Identity = 23/46 (50.00%), Postives = 36/46 (78.26%), Query Frame = 2
Query:  389 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVL 526
            +VV+V+ +NGG+++N+IPDS T+ GT RAF    F  L++R+KEV+
Sbjct:  266 KVVTVSKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVI 309          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.388e-41
Identity = 70/107 (65.42%), Postives = 86/107 (80.37%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTVVLIFQPAEE  +GAK M +EG L+NVEAIFG+HL  + P G  AS  G F+AG G+F+A I+GKGGHAAIPQH IDP++A SS V+SLQ++VSRE DP DS+V+
Sbjct:  161 GTVVLIFQPAEEGLSGAKMMREEGALKNVEAIFGIHLSPRTPFGKAASLAGSFMAGAGAFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQHLVSRETDPSDSKVV 267          

HSP 2 Score: 52.373 bits (124), Expect = 1.388e-41
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 2
Query:  389 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVL 526
            +VV+V  +NGG+++N+IPDS T+ GT RAF    F  L+ERIKE++
Sbjct:  265 KVVTVTKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQERIKEII 308          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.792e-41
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTV+L+FQPAEE G GAK +V+ GVLENV AIFGLH+ +    G ++SR G  +AG G FKA ISGKGGHAA+PQ  IDP+LA S+ ++SLQ++VSRE DPLDSQV+
Sbjct:  159 GTVILVFQPAEEGGAGAKKIVEAGVLENVGAIFGLHVSNLLGLGQLSSREGLLMAGSGRFKATISGKGGHAALPQFAIDPVLAASNVILSLQHLVSREADPLDSQVV 265          

HSP 2 Score: 51.2174 bits (121), Expect = 6.792e-41
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 2
Query:  389 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVL 526
            QVV+VA   G  ++N+IPDS T+ GTFRA   K F  L++RI +V+
Sbjct:  263 QVVTVATFEGSDAFNVIPDSVTIGGTFRALLPKSFEQLKQRIVQVI 308          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.152e-40
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTVVL+FQP EE GTGA+ MV+ G ++NVEAIFG H+  + PTGVV SRPG  LAGCG F+A I+GKGGHAA P   +DPILA S+ V++LQ +VSRE DPL++QV+
Sbjct:  174 GTVVLLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFFEAVITGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVV 280          

HSP 2 Score: 47.7506 bits (112), Expect = 1.152e-40
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 2
Query:  389 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVLV 529
            QVV+V     G + N+IP+S T+ GTFR F+ + F  L+ RI+EV+V
Sbjct:  278 QVVTVTRFLAGDALNVIPESITIGGTFRVFSNEGFLRLKRRIEEVIV 324          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.672e-36
Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GTV L+FQPAEE   GA+ ++QEGVL++V AIFGLH+  +   G V SRPG FLA  G F A I+GKGGHAA P + +DPIL  SS+++SLQ IV+RE DPL++ VI
Sbjct:  181 GTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRFLATITGKGGHAAGPHNAVDPILTASSAIVSLQQIVARETDPLEAAVI 287          

HSP 2 Score: 47.3654 bits (111), Expect = 2.672e-36
Identity = 19/45 (42.22%), Postives = 32/45 (71.11%), Query Frame = 2
Query:  392 VVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVL 526
            V+SV  + GG +YN+IP+S +  GTFR+   +  + L++RIKE++
Sbjct:  286 VISVTFMKGGDAYNVIPESVSFGGTFRSLTSEGLSYLKKRIKEIV 330          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.306e-35
Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            GT+ L+FQPAEE   GA  +++ G+L++V  IFGLH++   P GVVASRPG F++    F A  +GKGGHA +P   +DP++AVSS+V+SLQ +VSRE DPL++ V+
Sbjct:  170 GTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVV 276          

HSP 2 Score: 46.9802 bits (110), Expect = 1.306e-35
Identity = 19/45 (42.22%), Postives = 33/45 (73.33%), Query Frame = 2
Query:  392 VVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVL 526
            VVS+ ++ GG +YN+IP+SA++ GTFR+   +    L +RI+E++
Sbjct:  275 VVSITILKGGDAYNVIPESASLGGTFRSMTDEGLAYLMKRIREII 319          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.383e-35
Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 1
Query:    1 GTVVLIFQPAEERGTGAKDMVQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            G V L+FQPAEE   G   +++EG +++V+ IFG+H+    P GVVASRPG FLAG   F A I+GKGGHAA P H +DPI+AVSS+V+SLQ IV+RE DPL   V+
Sbjct:  139 GKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAVV 245          

HSP 2 Score: 44.2838 bits (103), Expect = 6.383e-35
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 2
Query:  392 VVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIKEVL 526
            VVSV  I GG ++N+IP+S T+ GT R+      + L +RI+EV+
Sbjct:  244 VVSVTTIKGGEAFNVIPESVTLGGTLRSMTTDGMSYLMKRIREVI 288          
The following BLAST results are available for this feature:
BLAST of DY305890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
ILL1_ORYSJ4.193e-4766.36IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI4.193e-4766.36IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL4_ARATH3.490e-4669.16IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL2_ARATH5.793e-4368.22IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ARATH1.388e-4165.42IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL5_ARATH6.792e-4163.55IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL2_ORYSJ1.152e-4063.55IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL7_ORYSJ2.672e-3658.88IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL8_ORYSJ1.306e-3552.34IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL3_ORYSJ6.383e-3557.01IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM2DB02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305890 ID=DY305890; Name=DY305890; organism=Citrus sinensis; type=EST; length=1250bp
GGCACTGTTGTTCTCATATTTCAACCAGCTGAGGAACGAGGAACAGGTGC
AAAAGATATGGTTCAAGAAGGTGTTCTTGAAAATGTAGAGGCCATTTTTG
GATTGCATTTGGTGCATAAGTATCCCACTGGCGTTGTTGCTTCACGGCCT
GGAGATTTTCTAGCTGGTTGTGGGAGCTTTAAGGCCAAAATCAGTGGTAA
AGGAGGCCATGCTGCAATCCCACAACACTGCATTGATCCAATTTTGGCAG
TTTCATCGTCAGTCATTAGCTTGCAGAATATTGTTTCCAGGGAAATAGAC
CCATTAGATTCTCAGGTAATTATTCGACATACATGCTTAATCAGAATTTC
GAGCTTTCCCTGCCCCTAACAAGAAAGTTTGGTCATGGCAGGTGGTTTCG
GTAGCTATGATCAATGGAGGGAGTTCATACAACATGATCCCAGACTCGGC
TACAGTAGCTGGAACTTTTAGAGCTTTCAACAAAAAGAGGTTCAATGCAC
TTAGAGAAAGAATCAAAGAGGTACTAGTTTAATTACTGCACTAATTCTAA
TGGCCATTACTATCGTATCAAGATTCACAATTACAATTTCTTTAATTTGT
TCACGATTATCAAATTGCAGCCGTCTGTTCAATCTTTGCTCTCTCTAGGT
ATATATTCAAATTGTGACAATCTGCCGCGTCGCTCGTCCCAGATAGCCGG
TGAGAGAGAACCCCCTTTACGCTTTCCANCCNGTCGTGTTTCCATGTCAC
AAAAGCGGGAGCCATATACAGGCGGTTTAAGTCGGCTTCNNCGACTCCTT
GGTCTTGGACGGAGAGCCCGGGCTTTTATTCTGCCNTTTACCGGTTAAAG
ATTCGTGGGGCGCGGTGTTGTTGGGGCCCNNTGTTTGTGTTTGTTATATG
TTGAGATGCGCCNGGTTTCCATACCTGACGTCCGCGGGGGGGGGGAGGTG
GGTGGAAAGGGGGAGGTGTCGGGGTAGATTANACNCCCCTTAAGGAAACA
GCAGATGGCTCGTCTCACGAACAAAAGAATATAAGTTTTCTGAAATGGGG
GTCTAATGAGATTTGAAGAGCAGGAGATTGGAGGCAGGGCGGGAAAGGTA
GTGTCCTAAGAGGTGCCGTGCCCGGTGAGGTTGAAGGTCGGGCGGGGTGC
GGGGNNGGAGGGGTATAGGGGGGGGGANNAGGNNNANGNNNTANGNNGCG
GNGGNNNANGATGGGGGGGTGGCGGGNNTTNACANTNTATTGANNGATAG
back to top