DY305883

Overview
NameDY305883
Unique NameDY305883
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1141
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305883_ssr305 microsatellite DY305883_ssr305:305..314. BLAST: Citrus ESTs to Prunus persica proteins V1
DY305883_ssr322 microsatellite DY305883_ssr322:322..335. BLAST: Citrus ESTs to Prunus persica proteins V1
DY305883_ssr338 microsatellite DY305883_ssr338:338..347. BLAST: Citrus ESTs to Prunus persica proteins V1
DY305883_ssr107 microsatellite DY305883_ssr107:107..118. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 6.296e-48
Identity = 91/179 (50.84%), Postives = 124/179 (69.27%), Query Frame = 1
Query:  358 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGLKFD-----HNLDGEQVLKDIWQLAMEYLSGVILLPGLVMVFFY 879
            F+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y + GLH G+ H+ +FVL L+A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI+FH +A QG ++N+  GL FD       + GE VL++++Q+ +     + L   L M+  Y
Sbjct:  462 FQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIIIY 640          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.241e-36
Identity = 74/185 (40.00%), Postives = 120/185 (64.86%), Query Frame = 1
Query:  358 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGLKFD------HNLDGEQVLKDIWQLAMEY-----LSGVILLPGLVMVFFY 879
            F +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y++     G  H+ +F L +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ ++++  +A QG +KN+F GL+FD        + GEQV+  I+ + + +     LS ++L+     + F+
Sbjct:  441 FYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFF 625          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 9.431e-36
Identity = 69/164 (42.07%), Postives = 112/164 (68.29%), Query Frame = 1
Query:  358 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGLKF------DHNLDGEQVLKDIWQLAMEY 831
            F +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y+L     G+ H+ +F L +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ YI++  +A QG +KN+F GL+F      +  + GE+V++ ++ + + Y
Sbjct:  440 FYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTY 603          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 7.733e-30
Identity = 65/157 (41.40%), Postives = 93/157 (59.24%), Query Frame = 1
Query:  358 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGLKFDH------NLDGEQVLKDI 810
            F RERLNGHYG   +   N  S+LP++ L+ L   +I   +     G  HF Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP  FW+YP+ YI +  +A QG +KNE  G+++D        + GE +L+ +
Sbjct:  435 FSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTV 591          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 8.569e-21
Identity = 51/159 (32.08%), Postives = 84/159 (52.83%), Query Frame = 1
Query:  358 FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGLKFD----HNLDGEQVLKDIWQLA 822
            +  E  N H GA  F+ G    ++P+L L+S+    + Y + GL   +    YFVL  F C+L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH Y+ +GL +NE+ G  F      ++ G Q ++  +Q++
Sbjct:  492 YRSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMCLLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFHTYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQIS 650          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.154e-15
Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  364 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGL 765
            RE  +G Y  ++ +  NT   LPYL +IS+I    VY L GL   +Q F YFVL+++  +L+  S ++ ++SL PNY+TG      +     L  G+F     LP  +W + +Y+ + +KYA   L  NE+  L
Sbjct:  393 RETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCL 524          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.487e-14
Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  364 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGL 765
            RE  +G Y  ++ +  NT   LPYL LI++I    +Y L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY+ G  +   +     L  G+F     LP  +W + +Y+ + +KYA   L  NE+  L
Sbjct:  381 RETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCL 512          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.589e-13
Identity = 41/156 (26.28%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  364 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEGLK---FDHN-----LDGEQVLKD 807
            +E   G Y  ++++  NT + +P+L ++SL+    VY + GL+   Q F++FVL ++  +L+  SL++ ++++ P++++G      + G   L  G+F     +P P W + +YY++ ++Y  + +  NE+  ++   F        + GE VLK+
Sbjct:  432 KESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKE 585          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.122e-12
Identity = 37/131 (28.24%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  364 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEF 756
            +E  +G Y  +++   N    LP+L +++++    VY L GL+  +  F +F LL++  +    S+++  ++LVPN++ G    +G+ G   L  G+F   +++P  +W + ++YI+  KY ++G   NEF
Sbjct:  453 KETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIP-GYWIF-MHYISLFKYPFEGFLINEF 581          
BLAST of DY305883 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.122e-12
Identity = 39/133 (29.32%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  364 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGLFKNEFEG 762
            RE     Y   ++V  +T   +P+L +IS++    VY L GL +    F YF L+++  +L+  S +   ++LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y++  KY ++ L  NE+ G
Sbjct:  415 RETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFECLMINEYRG 545          
The following BLAST results are available for this feature:
BLAST of DY305883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AB11G_ARATH6.296e-4850.84ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB12G_ARATH3.241e-3640.00ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB15G_ARATH9.431e-3642.07ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB13G_ARATH7.733e-3041.40ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB3G_ARATH8.569e-2132.08ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB8G_ARATH3.154e-1535.07ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB4G_ARATH3.487e-1432.84ABC transporter G family member 4 OS=Arabidopsis t... [more]
AB23G_ARATH8.589e-1326.28ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB5G_ARATH1.122e-1228.24ABC transporter G family member 5 OS=Arabidopsis t... [more]
AB10G_ARATH1.122e-1229.32ABC transporter G family member 10 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM2CH12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305883 ID=DY305883; Name=DY305883; organism=Citrus sinensis; type=EST; length=1141bp
GCTGTATTTAGCAATCTTGGGACTGACAATAATTCAATTCAGGTGAGAAT
AAAATCTATTTTTATTAATCACTGTGAATTACCAGAGATTCATTATTTTG
TTCTGTTTAATTAATTAATTTCAGGCAAGAGGTTCGCTGCTCATGTTTGT
AGCTTCATTTCTAACCTTCATGACCATTGGTGGATTCCCTTCTTTTGTTG
AGGACATGAAGGTACGTAAGCATACCCATACTAGAATTTTGTATATCATT
TTTTGTTAAAAGCACTTAATTTTTCTCTTACTTTTCATCTGACACTAAAT
TTGCGTGTGTGTGTATGTATATGTGTGTGTGTGTGTTTGTGTGTGTGTAT
AAAGGTATTTGAGCGAGAGAGACTAAACGGGCACTATGGTGCTACTGCGT
TTGTGTTTGGCAACACGTTTTCTGCGCTGCCATACTTAGCTCTCATTTCA
TTGATTCCTGGAGCGATAGTGTATGACCTTCCGGGACTTCACAAAGGATA
TCAACACTTCACATACTTTGTTTTGTTATTGTTTGCTTGCATGTTGCTCG
TTGAGAGCCTAATGATGATCGTTGCAAGCTTGGTGCCCAACTATCTGACG
GGCATAATAACAGGAGCTGGAATTCAAGGCCTTATGATATTAGGCGGCGG
ATTTTTTCGATTGCCAAATGATCTTCCTCATCCATTTTGGAAATACCCAT
TATATTATATTGCTTTCCACAAATATGCGTATCAAGGATTGTTCAAGAAC
GAGTTTGAAGGTCTGAAATTTGACCACAATCTAGATGGTGAACAAGTTTT
GAAAGATATTTGGCAACTGGCAATGGAATATCTAAGTGGGGTGATCTTGC
TACCTGGTTTGGTAATGGTGTTTTTTTACCACTTTGATTCCTTGGAAATC
GCCAGAAACGTTTGAAAAAATGAACCCTGGGGTTAAAACTTTTATGTTCG
TTTCCTCTGAATCCAAACAACTCCAAATCCATGGAAAATCCCGTTAACTA
ACCCCCCCCAACAAAAAAAAAAAATACTTTTAAAGTTGTTCGGTGAACAA
AAAAACCTCCCGATTTTCCTTTTTATTTCCCCCTTATTAAATTCCCCTTG
GAAATAGGGGGAAAAAAAAACCTTTTTTCTCCCTGGTTTTT
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