DY305880

Overview
NameDY305880
Unique NameDY305880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1067
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305880 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 7.600e-117
Identity = 208/289 (71.97%), Postives = 239/289 (82.70%), Query Frame = 2
Query:    2 CFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAPVISPDWPTAFYLSAAALFGLGXDNDAQETLKDGTNLEAK 868
            CFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPSHALDLIR +N  MLMDS LEG FS+DDGTEL+RLASRCLQYEPRERPN KSLV+++ PLQK+ E+ S+ L+G+P+   +T     L+PLGEAC R DLTAIHEI+EK+GYKDDEG   ELSFQMWTDQ+Q+TL  KK+GD+AFR KDF  AIECY+ FI+ GTM SPTV AR+ LCYL++DMP+EAL +AMQA VISP W  A YL A AL  LG +N+A   LKDG  LE+K
Sbjct:  199 CFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLESK 483          
BLAST of DY305880 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 9.312e-107
Identity = 193/291 (66.32%), Postives = 227/291 (78.01%), Query Frame = 2
Query:    2 CFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGI--PHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAPVISPDWPTAFYLSAAALFGLGXDNDAQETLKDGTNLEAK 868
            CFGLMKNSRDGKSYSTNLA+TPPEYLR GRV PESV YSFGT+LLDLLSGKHIPPSHALD+IRGKN ++LMDS LEG FS ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ +++VPSY ++GI       ST Q   L+PLGEACSR+DLTAIH+IL    Y+DDEG  NELSFQ WT Q+++ L+++KRGD +FR KDF TAI+CY+ FID GTMVSPTVF RR LCYLL D P  AL DAMQA  + PDWPTAFY+ + AL  L  + DA + L +   LE K
Sbjct:  216 CFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQR-PLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEK 504          
BLAST of DY305880 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.607e-66
Identity = 131/289 (45.33%), Postives = 182/289 (62.98%), Query Frame = 2
Query:    2 CFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAPVISPDWPTAFYLSAAALFGLGXDNDAQETLKDGTNLEAK 868
            CFGLMK   +             + + TG V PE+V+Y FGT+L++LLSGK IPPSHA ++I  KN   LMD  L+G FS D+   + +LAS+CL+YE +E PN K +VA+L  LQ   E PSY ++ + +       +  L+PLGEAC R+DL +IH IL   GY DD+ I  ELSF+ W  +++E  + ++ GD AF  +DF TAI CY+ F++  ++V P+V+ARR L YL  D P++AL D M A  + PDWPTAFYL + AL  L  + D+ +TLK+   LE K
Sbjct:  190 CFGLMKEINN-------------DQITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVK 464          
The following BLAST results are available for this feature:
BLAST of DY305880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y5126_ARATH7.600e-11771.97Probable serine/threonine-protein kinase At5g41260... [more]
Y4523_ARATH9.312e-10766.32Probable serine/threonine-protein kinase At4g35230... [more]
SSP_ARATH1.607e-6645.33Probable inactive receptor-like kinase SSP OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM2CH07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305880 ID=DY305880; Name=DY305880; organism=Citrus sinensis; type=EST; length=1067bp
CTGCTTTGGCCTTATGAAGAATAGTAGAGATGGCAAGAGCTATAGTACAA
ACTTGGCTTTCACTCCCCCAGAATACTTGAGAACAGGAAGGGTTATCCCA
GAAAGTGTTGTTTACAGCTTTGGCACCCTGTTGCTTGATCTTCTCAGTGG
CAAACACATACCCCCAAGTCATGCTCTTGACCTCATACGTGGGAAAAATT
TTCTGATGTTGATGGACTCATGTTTGGAGGGTCATTTCTCAAATGATGAT
GGAACTGAACTAGTTCGGTTAGCTTCACGTTGTTTACAGTATGAACCCCG
TGAAAGGCCAAATGCAAAGTCTCTTGTAGCTTCTCTCACTCCTCTTCAGA
AGGAAGCTGAGGTTCCATCGTACACTTTGATGGGTATTCCGCATGGAACT
GCATCCACCAAGCAAACGATTACACTTACTCCTCTGGGTGAAGCTTGTTC
AAGACTTGACCTTACCGCAATTCATGAAATATTGGAGAAGGTTGGATACA
AGGATGATGAGGGAATTGCAAATGAGCTTTCTTTCCAAATGTGGACAGAT
CAAATACAGGAGACATTGAATTCCAAGAAGCGTGGAGATGCTGCTTTTCG
AGCTAAAGACTTCCCCACTGCTATTGAATGTTACACGCATTTCATTGATG
GTGGGACCATGGTATCACCGACAGTGTTTGCTAGACGATGCTTATGTTAC
TTGCTGAGTGACATGCCTCAAGAAGCTCTTGGAGACGCAATGCAAGCTCC
AGTCATATCTCCAGACTGGCCCACTGCCTTCTACCTTTCAGCTGCTGCCC
TTTTCGGCCTTGGCATNGACAATGATGCTCAGGAAACTCTCAAAGATGGC
ACAAACTTGGAAGCAAAAAACATAGAAACTGAAAAGTATACCGATTCCTC
TTTTTTTTTTTTTTTTTTTCCCTCTCCCTTTTGGCATTTTATTTAAAAAT
CCTTGGAATCTCCCTTCTCTTTACCCCTTTGGGCATTGGGGTTCCACCGC
ACCCCGGGATAATTTGTAAAATTAAAATGTTTGGAAAATTTTGGTTTGCC
TTTCACTCTTTTTCCCC
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