EY702665

Overview
NameEY702665
Unique NameEY702665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13849 contig Csv1_Contig13849:31..869. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: MCAT_ARATH (Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.000e-52
Identity = 100/136 (73.53%), Postives = 113/136 (83.09%), Query Frame = 2
Query:  371 MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKCRWKPKG 778
            M D  KDL SGTVGGAAQL+ GHPFDTIKVKLQSQP P PGQ P+Y GA+DAVKQT+A+EG +GLYKGMGAPLATVAAFNA+  TVRGQME LLRS+ G PLT++QQ + GAGAG A SF ACPTE IKCR + +G
Sbjct:    1 MADAWKDLASGTVGGAAQLVVGHPFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVASEGTKGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSEAGVPLTISQQFVAGAGAGFAVSFLACPTELIKCRLQAQG 136          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: DIF1_CAEEL (Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21
Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 2
Query:  371 MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKC 760
            M D+  +  +G VGG+  +I GHPFDT+KV++Q+ P P PG+ P++ GA+D VK+T++ EG   LYKGM APL  V+   A+        + L ++ P   +T  Q    GA AGV  +    P E IKC
Sbjct:    1 MSDVLLNFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAVFFGGCAVGKWLQQTDPSQEMTFIQNANAGALAGVFTTIVMVPGERIKC 130          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.925e-19
Identity = 55/126 (43.65%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  386 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKCR 763
            KD  +GTV GAA L  GHPFDTI+V+LQ+   P+        G M+  + TI  EG  GLYKG+ +PL  +    A+     GQM+ LL+     PLTV Q  I G  AGV  S    P E +KCR
Sbjct:    8 KDSIAGTVAGAACLFTGHPFDTIRVRLQTSNTPI--------GIMECFRNTIKYEGFSGLYKGVTSPLFGMMFETAVLFAGYGQMKVLLQKDENTPLTVGQCAIAGGFAGVGASVVLTPVELVKCR 125          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: MCAT_RAT (Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.744e-19
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  386 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKC 760
            K+L +G  GG   +  GHP DT+KV+LQ+QP  LPGQPP Y+G +D  ++T+  EG  GLY+GM AP+  V    A+     G  + L +  P   LT  Q    G  +GV  +    P E IKC
Sbjct:   12 KNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTIDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKRLQQKSPEDELTYPQLFTAGMLSGVFTTGIMTPGERIKC 136          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: MCAT_MACFA (Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  386 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKC 760
            K+L +G  GG   +  GHP DT+KV+LQ+QP  LPGQPP Y+G  D  ++T+  EG RGLY+GM AP+  V    A+     G  + L +  P   L+  Q    G  +G+  +    P E IKC
Sbjct:   12 KNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGIRGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGIFTTGIMTPGERIKC 136          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: MCAT_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18
Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  386 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKC 760
            K+L +G  GG   +  GHP DT+KV+LQ+QP  LPGQPP Y+G  D  ++T+  EG  GLY+GM AP+  V    A+     G  + L +  P   L+  Q    G  +GV  +    P E IKC
Sbjct:   12 KNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKC 136          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: MCAT_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 49/125 (39.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  386 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKC 760
            K+L +G  GG   +  GHP DT+KV+LQ+QP  L GQPP Y+G +D  ++T+  EG  GLY+GM AP+  V    A+     G  + L +  P   L+  Q    G  +GV  +    P E IKC
Sbjct:   12 KNLLAGGFGGMCLVFVGHPLDTVKVRLQTQPPSLSGQPPMYSGTLDCFRKTLMREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKSPEDELSYPQLFTAGMLSGVFTTGIMTPGERIKC 136          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: COLT_DROME (Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.154e-17
Identity = 49/124 (39.52%), Postives = 64/124 (51.61%), Query Frame = 2
Query:  386 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALLRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIK 757
            K   +G  GG   ++ GHP DTIKV+LQ+ P P PG+ P Y G  D   +TI  EG RGLYKGM APL  VA   A+        + L +      LT  Q  + G+ +G+  +    P E IK
Sbjct:   17 KSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGERIK 140          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: MCFG_DICDI (Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.184e-17
Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  386 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEAL---LRSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIK 757
            KD+ +G++GG  Q+  GHP DTIKV+LQ+Q        P Y+G MD +K+TI+ EG  GLYKG+ +PL  ++  N++     GQ + L   L   P   L +      GA AG+A  F   P +  K
Sbjct:   15 KDIVAGSIGGVGQVFTGHPLDTIKVRLQTQSVG----NPIYSGTMDCLKKTISQEGFAGLYKGVASPLVGLSIMNSVMFLAYGQSKTLIQKLSDNPNEALDLKGLTAAGALAGIAIGFVDAPVDLFK 137          
BLAST of EY702665 vs. ExPASy Swiss-Prot
Match: YMC1_YEAST (Carrier protein YMC1, mitochondrial OS=Saccharomyces cerevisiae GN=YMC1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15
Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = 2
Query:  380 IAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALPITVRGQMEALL---RSQPGCPLTVNQQIICGAGAGVACSFPACPTEWIKCR 763
            + KDL +GT GG AQ++ G PFDT KV+LQ+   P          AM+ V++ +A EGPRG YKG   PL  V A  +L   V   M+       +     L++ Q   CG   G+  SF A P E ++ R
Sbjct:   25 VVKDLLAGTAGGIAQVLVGQPFDTTKVRLQTSSTP--------TTAMEVVRKLLANEGPRGFYKGTLTPLIGVGACVSLQFGVNEAMKRFFHHRNADMSSTLSLPQYYACGVTGGIVNSFLASPIEHVRIR 147          
The following BLAST results are available for this feature:
BLAST of EY702665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
MCAT_ARATH6.000e-5273.53Mitochondrial carnitine/acylcarnitine carrier-like... [more]
DIF1_CAEEL9.342e-2140.77Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 P... [more]
MCFS_DICDI3.925e-1943.65Mitochondrial substrate carrier family protein S O... [more]
MCAT_RAT8.744e-1940.80Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCAT_MACFA1.142e-1840.00Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCAT_HUMAN4.340e-1840.00Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCAT_MOUSE1.649e-1739.20Mitochondrial carnitine/acylcarnitine carrier prot... [more]
COLT_DROME2.154e-1739.52Congested-like trachea protein OS=Drosophila melan... [more]
MCFG_DICDI8.184e-1738.58Mitochondrial substrate carrier family protein G O... [more]
YMC1_YEAST1.543e-1537.40Carrier protein YMC1, mitochondrial OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-G07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702665 ID=EY702665; Name=EY702665; organism=Citrus sinensis; type=EST; length=839bp
AACCACTCTCATGTGGCTGTGCCTGTAAATCTGCTTCAAGACTCATTTCT
TTATTTTTCTTTCCTTTTATTTTAAGATTGTCACAGCCTCCAATATCCCA
TTACCTACCTCCTTCCTTTTTAGTACCTTTTTTTTCTATTGTCATTCCTT
TTTTTCTCTCATTAAAAAAGTAAACCCGGAAGAAAAAATAAGAAAAATTA
AACCCAGTTCCTTTTTCCTGGCGTATTTTTAATTTGTATACCCTCCTTTT
AATCTAATACTTTGTGTTTTCTCAAATTGAATCATTTGAGGGAAACAACT
TTTCTCCACTTAGATTCGGTTGCCGTTCTCGGGGCTCTGCTTACTCCGGT
GCCAGTGAGAATCGGCTCTGATGGGAGACATAGCCAAGGATCTATTTTCT
GGGACTGTTGGAGGGGCAGCACAATTAATATGTGGGCACCCATTTGATAC
CATCAAGGTCAAGCTTCAAAGCCAGCCTGCTCCACTCCCTGGCCAACCTC
CCAAGTATGCTGGTGCCATGGATGCTGTCAAGCAAACCATAGCTGCCGAA
GGGCCAAGGGGCTTGTACAAAGGTATGGGAGCTCCACTAGCTACTGTTGC
CGCTTTTAATGCCCTCCCTATTACAGTGAGAGGACAAATGGAGGCACTGC
TCAGATCTCAACCTGGGTGCCCACTAACGGTCAACCAGCAGATTATTTGC
GGGGCTGGGGCTGGTGTTGCCTGTTCTTTTCCGGCTTGCCCCACAGAATG
GATCAAATGCAGGTGGAAGCCCAAAGGGATTAACAAGGTCTGGCCAAATT
GGGGTGGCAGTGGAATTATGTGGACAGTGGATGTGGGTA
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