DY305826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 2.439e-58 Identity = 123/158 (77.85%), Postives = 126/158 (79.75%), Query Frame = -3 Query: 319 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXVTVLNGSSGAPESLADPLPV 792 KGGRRI FDLDYDEKDSSYNRIKSLVTEE KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RLKTK+IELQ EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE V VLNGSSG PESL + L + Sbjct: 765 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSGTPESLPEALSI 922
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.982e-56 Identity = 121/159 (76.10%), Postives = 125/159 (78.62%), Query Frame = -3 Query: 319 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXVTVLNGSSGAPESLA-DPLPV 792 KGGRRI FDLD DEKDSSYNRIKSLVTEE KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF+RLK K+IELQ EGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE VTVLNGSSG P A +P+PV Sbjct: 765 KGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGTPSDPAPEPIPV 923
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.253e-54 Identity = 119/159 (74.84%), Postives = 124/159 (77.99%), Query Frame = -3 Query: 316 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXVTVLNGSSGAPESLADPLPVV 792 KGGRRI FDLD+DEKDSSYNRIKSLVTEE KQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLKEVF RLK K+IELQ EGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE VTVLNG+SGAP A P P++ Sbjct: 768 KGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTVLNGTSGAPSDSA-PEPIL 925
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 4.456e-52 Identity = 115/162 (70.99%), Postives = 123/162 (75.93%), Query Frame = -3 Query: 319 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXVTVLNGSSGAP----ESLADPLPV 792 KGGRRI FDLDY EKDSSYNRIKSLVT+E KQYFRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E+F+RLK K++ELQ EGYNPSYGARPLRRAIMRLLEDSM EKMLAREIKE VTVLNG SG P E D LPV Sbjct: 713 KGGRRIGFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQELFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 6.906e-37 Identity = 83/144 (57.64%), Postives = 102/144 (70.83%), Query Frame = -3 Query: 361 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXVTVLNG 792 KGG + F+L D+ +S Y R++SLV EE KQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML EVF R+K +DI+L EGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK VTVL G Sbjct: 671 KGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSAVVDVTNEGEVTVLLG 814
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.020e-37 Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = -3 Query: 421 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 792 KGG + F+L D+ +S Y R++SLV EE KQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML EVF R+K +DI+L EGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK Sbjct: 671 KGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIK 794
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.178e-36 Identity = 80/125 (64.00%), Postives = 95/125 (76.00%), Query Frame = -3 Query: 418 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 792 KGG + FDL D+ +S Y RIK+LV EE KQYFRPEFLNRLDE+IVFRQLTK EV EIA+IMLKEVF R+ K I+L+ EGYNP YGARPLRRA+MRLLED+++E+ LA +IKE Sbjct: 668 KGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRLLEDTLSEEFLAEKIKE 792
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.632e-33 Identity = 72/125 (57.60%), Postives = 98/125 (78.40%), Query Frame = -3 Query: 418 KGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 792 K G + F+L+ + ++ Y+R+++LV EE KQYFRPEFLNR+DE+IVFRQLTK EV++IA IML+E+F+R+K + I LQ EGYNPSYGARPLRRA++RLLEDS+AE++L+ +IKE Sbjct: 701 KKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKE 825
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: ERD1_ARATH (ERD1 protein, chloroplastic OS=Arabidopsis thaliana GN=ERD1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.494e-23 Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = -3 Query: 421 FQSQMI*IPYVVPRAEFARGKGGRRICFDLDYDEKDSSYNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 852 F++ +I + V A+G+ G I F LD DE+ +SY +K+LV EE K YFRPE LNR+DE+++FRQL K ++ EI ++ML+++ RL + L+ +GY+P+YGARPLRR + ++ED ++E LA K Sbjct: 768 FKNALIIMTSNVGSLAIAKGRHGS-IGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFK 910
BLAST of DY305826 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 5.676e-23 Identity = 53/110 (48.18%), Postives = 80/110 (72.73%), Query Frame = -3 Query: 424 KDSS-YNRIKSLVTEEXKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 750 KDS+ + ++ LV EE K++FRPEFLNR+DE+IVF LTK ++ EI +M+K++ RL+ K++ L+ EGY+P YGARPLRRA+MRLLED++A++ L++ + Sbjct: 715 KDSALFEKVTELVNEELKEFFRPEFLNRIDEIIVFNHLTKYDIWEICGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCLSKPL 824 The following BLAST results are available for this feature:
BLAST of DY305826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305826 ID=DY305826; Name=DY305826; organism=Citrus sinensis; type=EST; length=1187bpback to top |