DY305815

Overview
NameDY305815
Unique NameDY305815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1253
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6751 contig Csv1_Contig6751:1..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 2.057e-79
Identity = 142/184 (77.17%), Postives = 153/184 (83.15%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQ+YKYR+PRQWLTSGGL AMGFGL                 IDGDGSFIMNVQELATIKVE LP+KI+LLN  HL MV+QWEDRFYKAN AHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DL AAIQ MLDTPGPYLLDVI PHQEHVLPMIPSGGAFKDVITEGDGR+ Y
Sbjct:  481 QHQMWAAQYYKYRKPRQWLTSGGLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 664          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 2.057e-79
Identity = 142/184 (77.17%), Postives = 153/184 (83.15%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQ+YKYR+PRQWLTSGGL AMGFGL                 IDGDGSFIMNVQELATIKVE LP+KI+LLN  HL MV+QWEDRFYKAN AHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DL AAIQ MLDTPGPYLLDVI PHQEHVLPMIPSGGAFKDVITEGDGR+ Y
Sbjct:  484 QHQMWAAQYYKYRKPRQWLTSGGLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 667          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 5.984e-79
Identity = 142/184 (77.17%), Postives = 153/184 (83.15%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQFYKYR+PRQWL+S GL AMGFGL                 IDGDGSFIMNVQELATI+VE LP+KILLLN  HL MVMQWEDRFYKAN AHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +L  AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y
Sbjct:  469 QHQMWAAQFYKYRKPRQWLSSSGLGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 652          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 5.984e-79
Identity = 142/184 (77.17%), Postives = 153/184 (83.15%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQFYKYR+PRQWL+S GL AMGFGL                 IDGDGSFIMNVQELATI+VE LP+KILLLN  HL MVMQWEDRFYKAN AHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +L  AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y
Sbjct:  472 QHQMWAAQFYKYRKPRQWLSSSGLGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 655          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB_ARATH (Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 4.288e-77
Identity = 138/184 (75.00%), Postives = 150/184 (81.52%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQFY Y++PRQWL+SGGL AMGFGL                 IDGDGSFIMNVQELATI+VE LP+K+LLLN  HL MVMQWEDRFYKAN AHT+LGDP++E EIFPNML FA ACGIP A+VT+KADL  AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG F DVITEGDGR +Y
Sbjct:  487 QHQMWAAQFYNYKKPRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFNDVITEGDGRIKY 670          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB1_ORYSJ (Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.529e-66
Identity = 116/184 (63.04%), Postives = 143/184 (77.72%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQ+Y Y+RPRQWL+S GL AMGFGL                 IDGDGSF+MN+QELA I++E LP+K+++LN  HL MV+QWEDRFYKAN AHTYLG+P  ESEI+P+ +  A+   IP  +VT+K+++ AAI+ ML+TPGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  461 QHQMWAAQYYTYKRPRQWLSSAGLGAMGFGLPAAAGASVANPGVTVVDIDGDGSFLMNIQELALIRIENLPVKVMVLNNQHLGMVVQWEDRFYKANRAHTYLGNPECESEIYPDFVTIAKGFNIPAVRVTKKSEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 644          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB1_MAIZE (Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.997e-66
Identity = 117/184 (63.59%), Postives = 141/184 (76.63%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQ+Y Y+RPRQWL+S GL AMGFGL                 IDGDGSF+MNVQELA I++E LP+K+ +LN  HL MV+QWEDRFYKAN AHTYLG+P  ESEI+P+ +  A+   IP  +VT+K ++ AAI+ ML+TPGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  455 QHQMWAAQYYTYKRPRQWLSSAGLGAMGFGLPAAAGASVANPGVTVVDIDGDGSFLMNVQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTYLGNPENESEIYPDFVTIAKGFNIPAVRVTKKNEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB2_MAIZE (Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.690e-65
Identity = 114/184 (61.96%), Postives = 141/184 (76.63%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWAAQ+Y Y+RPRQWL+S GL AMGFGL                 IDGDGSF+MN+QELA I++E LP+K+ +LN  HL MV+QWEDRFYKAN AHT+LG+P  ESEI+P+ +  A+   IP  +VT+K+++ AAI+ ML+ PGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  455 QHQMWAAQYYTYKRPRQWLSSAGLGAMGFGLPAAAGAAVANPGVTVVDIDGDGSFLMNIQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTFLGNPENESEIYPDFVAIAKGFNIPAVRVTKKSEVHAAIKKMLEAPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB2_BRANA (Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 8.388e-65
Identity = 113/175 (64.57%), Postives = 137/175 (78.29%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVI 526
            QHQMWAAQFY++++PRQWL+SGGL AMGFGL                 IDGDGSFIMN+QELATI+VE LP+K+LL+N  HL MV+QWED FY AN A ++LGDP+    +FP+ML FA +CGIP A+VTR+ DL  AIQTMLDTPGP+LLDV+ PHQ+HVLP+IPSGG FKD+I
Sbjct:  462 QHQMWAAQFYRFKKPRQWLSSGGLGAMGFGLPAAMGAAIANPGAVVVDIDGDGSFIMNIQELATIRVENLPVKVLLINNQHLGMVLQWEDHFYAANRADSFLGDPANPEAVFPDMLLFAASCGIPAARVTRREDLREAIQTMLDTPGPFLLDVVCPHQDHVLPLIPSGGTFKDII 636          
BLAST of DY305815 vs. ExPASy Swiss-Prot
Match: ILVB2_ORYSJ (Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 2.526e-61
Identity = 109/186 (58.60%), Postives = 135/186 (72.58%), Query Frame = 2
Query:    2 QHQMWAAQFYKYRRPRQWLTSGGLWAMGFGLXXXXXXXXXXXXXXXXHIDGDGSFIMNVQELATIKVEKLPIKILLLNKHHLSMVMQWEDRFYKANMAHTYLGDPSRES--EIFPNMLKFAEACGIPGAQVTRKADLTAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 553
            QHQMWA Q Y YRRPRQWL+S GL AMGFGL                 IDGDGS +MN+QELA ++VE LP+K+++LN  HL MV+QWEDRFY AN AHTYLG+P+     E++P+ +  A   GIP A+VTRK ++ AA++ M+  PGPYLLDV+ PHQEHVLPMIPS GAFKD+I +GDGR+ Y
Sbjct:  478 QHQMWATQHYTYRRPRQWLSSAGLGAMGFGLPAAAGAAVANPGATVVDIDGDGSLLMNIQELAMVRVEDLPVKVMVLNNQHLGMVVQWEDRFYDANRAHTYLGNPAANGGGEVYPDFVTIAGGFGIPAARVTRKGEVRAAVEEMMAAPGPYLLDVVVPHQEHVLPMIPSNGAFKDIIVDGDGRSSY 663          
The following BLAST results are available for this feature:
BLAST of DY305815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ILVB2_TOBAC2.057e-7977.17Acetolactate synthase 2, chloroplastic OS=Nicotian... [more]
ILVB1_TOBAC2.057e-7977.17Acetolactate synthase 1, chloroplastic OS=Nicotian... [more]
ILVB3_BRANA5.984e-7977.17Acetolactate synthase 3, chloroplastic OS=Brassica... [more]
ILVB1_BRANA5.984e-7977.17Acetolactate synthase 1, chloroplastic OS=Brassica... [more]
ILVB_ARATH4.288e-7775.00Acetolactate synthase, chloroplastic OS=Arabidopsi... [more]
ILVB1_ORYSJ1.529e-6663.04Acetolactate synthase 1, chloroplastic OS=Oryza sa... [more]
ILVB1_MAIZE1.997e-6663.59Acetolactate synthase 1, chloroplastic OS=Zea mays... [more]
ILVB2_MAIZE1.690e-6561.96Acetolactate synthase 2, chloroplastic OS=Zea mays... [more]
ILVB2_BRANA8.388e-6564.57Acetolactate synthase 2, chloroplastic OS=Brassica... [more]
ILVB2_ORYSJ2.526e-6158.60Probable acetolactate synthase 2, chloroplastic OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BH02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305815 ID=DY305815; Name=DY305815; organism=Citrus sinensis; type=EST; length=1253bp
GCAACATCAGATGTGGGCTGCTCAGTTTTACAAGTACAGGAGACCTCGCC
AGTGGCTAACATCCGGAGGACTATGGGCTATGGGTTTTGGATTGCCTGCT
GCAATCTGAGCTGCTGTTGCAAATCCTGATGCCATCATTGTACATATTGA
TGGTGATGGGAGTTTCATCATGAACGTCCAGGAGTTGGCGACTATTAAGG
TAGAGAAACTCCCCATCAAGATATTGCTGTTGAATAAACATCACTTGAGC
ATGGTGATGCAATGGGAGGATCGGTTTTACAAGGCAAATATGGCTCACAC
GTATTTGGGAGATCCATCAAGAGAGTCTGAAATATTTCCGAATATGTTGA
AGTTTGCAGAAGCCTGTGGAATACCTGGAGCACAAGTAACAAGGAAGGCA
GATCTGACAGCCGCAATTCAGACTATGTTGGACACTCCTGGACCATACCT
TCTGGACGTCATCTTTCCTCATCAAGAGCATGTCCTGCCTATGATCCCCA
GTGGTGGAGCTTTTAAAGATGTGATAACTGAAGGTGATGGAAGAACACAG
TATTAACGACAAGCTGAAGCAGCATAGATGCCTTCTTGGCTATGTATTTA
TGTTCCTTTTGAGTTGCAGGCTTAACTTACCTATGAGTGTGTGGCATTGT
TTTTAGTTCAGGTGTCAGTTTTAATGGAACTACTGTTTGTTTAACAAACA
AACTCTATGAGTTACAATGTTATTATAATTTGTTTGTGTATTGAGTAGTT
TGATTTTTTTTTCCCCCATTTTTCCCTTCTTGCGAAGAGTCGCCGTAGAA
TCTATTTTAACCTCAAAAATTTTTTTCAAACCAAACTCCCAAGGTCCGGC
CAATTCCCATATCCCTCCGGGGGGGGGCCCCGGACCCCTTCCCCCCCTTA
ATAGTCGCTTCTAATAAACACCCCTTGGCCCCCCCGTTTTACCACGGACC
CGAAAGGGGAAAACCCCCCGGCTTCCCCCCCCTTAAGCCCCCTCGGGCCC
CCAACCCCCCCTTTTTCCCCCTGGGGGGGAATTAAAAAAAAAGGCCCCCC
CCCCCCTCCCCCCTTTCCCCCCAATCCCCCCCCCCCCGGTAGGGCCGAAA
TGGGACACATTTGTTGGGGCGATTAATTTTTTTTTTTTTTAATATTCCCC
AATTATTATTTTTTTTTGTTAAAACCACCCCCCTTTTTTTTTTCCCCCCC
CCGCAACGGCCCCCCCACAAACCCCCCCCCCCCAAAACCCCCCCCCCTCC
TTT
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