DY305812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 1.138e-61 Identity = 131/242 (54.13%), Postives = 166/242 (68.60%), Query Frame = 2 Query: 2 NFENSAHSRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQPL-PLASNAEN 718 N + A +RE + K +E KS++ C+LFGIPL +N + +S RN +N+ AG Q + + S+ SK SK +D++ E +P Q + H KD ++KT S+RSCTKV KQGIALGRSVDLSKF NY+EL+AELD+LFEF+GELMAPKK+WLIVYTD+E DMMLVGDDPWQEFC MVRKIFIYTKEEV KMN +LS + E+ + GEG DAK+ K P S+A N Sbjct: 624 NAQAQAQAREQVTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKTN--SSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGSDAKDAKSASNPSLSSAGN 858
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.225e-49 Identity = 112/245 (45.71%), Postives = 152/245 (62.04%), Query Frame = 2 Query: 2 NFENSAHSRELMPKSAMVQ-DQEAGKSKDCKLFGIPLFS-----NHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQPLPLASNAEN 718 +F R + P +++ + E + K+FG + + NH+ +H + P+ Q + ++D E S S+ E+EK Q +Q +KDV+SKTQ STRSCTKV KQG+ALGRSVDLSKF+NYDEL AELD++FEFDGEL++ KNW IVYTD+EGDMMLVGDDPW+EFC +VRKI+IYTKEEV KMNS S + + +DS N +G LP+ + ++N Sbjct: 579 SFARPEQPRVIRPHASIAPVELEKTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSL--NQLQPVQTDCIPEVSVSTA-----GTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAPRKDDSSENEKG--------HLPMPNKSDN 808
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 4.957e-49 Identity = 115/221 (52.04%), Postives = 145/221 (65.61%), Query Frame = 2 Query: 2 NFENSAH----SRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDS 646 + E S+H S L+ +V D K+K C LFGI L S PE ++S + + G L Q A E D+ S+ SK+ K D Q + EK Q TK+++SK Q GS+RSC KV KQGIALGRS+DL+KF YDELIAELDQ+F+F+GEL + KNW++VYTD+EGDMMLVGDDPW EFC MV KIFIYT+EEV KMN +L+S+ EDS Sbjct: 599 HIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSP-AKPELLISPPSVAFD--GKLQQD--ALEEDECSDPSKTVKPLDGAQHDSAREK-HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSEDS 813
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 1.104e-48 Identity = 116/240 (48.33%), Postives = 151/240 (62.92%), Query Frame = 2 Query: 26 RELMPKSAMVQ--DQEAGKSKDCKLFGI----PLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNG--EGIDAKEVKQPLPLAS-NAEN 718 R + PK +V D + K CKLFGI P S + V + T P ++ E ++ S+ SK+ K D Q + EKPS SQ ++++ K+Q STRSC KV KQGIALGRSVDL+KFN Y+ELIAELD +F+F+GEL PKK W++VYTD+EGDMMLVGDDPW EFC MV KIFIYT+EEV +MN +L+S+ EDS N G +E++ L +S N+EN Sbjct: 615 RLIKPKPLVVAHGDVQKAKGASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKPLDTPQPDSVPEKPS--SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHANSMERGSVGREMRGCLSTSSLNSEN 852
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.104e-48 Identity = 116/240 (48.33%), Postives = 151/240 (62.92%), Query Frame = 2 Query: 26 RELMPKSAMVQ--DQEAGKSKDCKLFGI----PLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNG--EGIDAKEVKQPLPLAS-NAEN 718 R + PK +V D + K CKLFGI P S + V + T P ++ E ++ S+ SK+ K D Q + EKPS SQ ++++ K+Q STRSC KV KQGIALGRSVDL+KFN Y+ELIAELD +F+F+GEL PKK W++VYTD+EGDMMLVGDDPW EFC MV KIFIYT+EEV +MN +L+S+ EDS N G +E++ L +S N+EN Sbjct: 615 RLIKPKPLVVAHGDVQKAKGASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKPLDTPQPDSVPEKPS--SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHANSMERGSVGREMRGCLSTSSLNSEN 852
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.920e-33 Identity = 90/223 (40.36%), Postives = 130/223 (58.30%), Query Frame = 2 Query: 53 VQDQEAGKSKDCKLFGIPLFSNHV-MPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQPLPLASNAEN 718 V+ ++ + + +LFGI L S+ + +PE + +N +D SD KSE SK S+ EK +P++ K+V+SK Q STRS TKVQ QG+ +GR+VDL+ Y+ELI ++++LF+ GEL + + W IV+TDDEGDMMLVGDDPW EFC MV++IFI++KEEV KM +P N + +EV+ L S +N Sbjct: 442 VEQKKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH-----SDPKSEISKVSE-----------EKKQEPAEGSPKEVQSK-QSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS-RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM-----------TPGNQLRMLLREVETTLTTTSKTDN 635
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.569e-31 Identity = 82/228 (35.96%), Postives = 123/228 (53.95%), Query Frame = 2 Query: 8 ENSAHSRELMPKSAMVQDQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNT-MNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQ 688 E A+S + ++ S C+LFGI + S P+ + ++PA ++D ESDQ S+ S + N+ + P+ S+ + +S+ RSCTKV QG+A+GR+VDL++ + YD+L +L+++F+ GEL A K W +VYTDDE DMMLVGDDPW EFC MV++I+IYT EE ++ S P+ G+ I KQ Sbjct: 454 ETRANSYSASISKVPSEKKQEPSSAGCRLFGIEISSAVEATSPLAAVSGVGQDQPAASVDA-----ESDQLSQPSHA----------NKSDAPAASSEPSPHETQSR----QVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKS------KLPIIGDAIKPNPNKQ 656
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.356e-30 Identity = 74/178 (41.57%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 86 CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRS--KTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMN 613 C+LFG L N V + S + A + F+S Q+SE N+ + PS +RS ++Q RSCTKV QG A+GR++DL++ Y++L +L+++F+ GEL+ K W +VYTDDE DMM+VGDDPW EFCGMVRKIFIYT EEV K++ Sbjct: 465 CRLFGFELVEN-VNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLN----------INQSDIPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 631
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 7.442e-29 Identity = 65/125 (52.00%), Postives = 87/125 (69.60%), Query Frame = 2 Query: 251 DNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSL 625 D+ + + K P+ +++ + + Q STRS KVQ QG A+GR+VDL+ +YDELI EL+++FE +GEL +PK W IV+TDDEGD MLVGDDPW EFC M +K+FIY +EV KM S SL Sbjct: 482 DSNISDSTTKCQDPNSSNSP--KEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL 603
BLAST of DY305812 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.824e-28 Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 2 Query: 338 STRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNS-VSLSSKGEDSPMNGEGID 670 ++RS TKVQ QGIA+GR+VDL+ +YDELI EL+++FE G+L+A K W++V+TDDEGDMML GDDPW EFC M +KIFIY+ +EV KM + + +SS E+ E + Sbjct: 487 TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK-WIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISSSLENEEYGNESFE 597 The following BLAST results are available for this feature:
BLAST of DY305812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305812 ID=DY305812; Name=DY305812; organism=Citrus sinensis; type=EST; length=1257bpback to top |