DY305804

Overview
NameDY305804
Unique NameDY305804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1192
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCAT_ARATH (Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 1.169e-76
Identity = 156/255 (61.18%), Postives = 182/255 (71.37%), Query Frame = 3
Query:  276 MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAG---SGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPQWHVRFKGCCHGLVCMEWVKK*MAGSQDTSPLGKRNSVFGRWL----IWELVSGFPGYPPEVFQEGFFGVNKLQNP 1019
            M D  KDL SGTVGGAAQL+ GHPFDTIKVKLQSQP P PGQ P+Y GA+DAVKQT+A+EG +GLYKGMGAPLATVAAFNA+LFTVRGQME LLRS+ G PLT++QQ + GAGAG AVSFLACPTELIKCRLQAQ ALAG   +  V  AVKYGGP+DVA+ VLRSEGG RGLFKGL P +     G        E  K+ +AG  DTS LG+ + +    +     W +V     YP +V  +    V+  +NP
Sbjct:    1 MADAWKDLASGTVGGAAQLVVGHPFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVASEGTKGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSEAGVPLTISQQFVAGAGAGFAVSFLACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPTFAREVPGNATMFAAYEAFKRFLAGGSDTSSLGQGSLIMAGGVAGASFWGIV-----YPTDVV-KSVLQVDDYKNP 249          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: DIF1_CAEEL (Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.654e-30
Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 3
Query:  276 MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKG 794
            M D+  +  +G VGG+  +I GHPFDT+KV++Q+ P P PG+ P++ GA+D VK+T++ EG   LYKGM APL  V+   A+ F      + L ++ P   +T  Q    GA AGV  + +  P E IKC LQ Q A    G  G  V Y GP+DV K+ L  +GG+  +++G
Sbjct:    1 MSDVLLNFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAVFFGGCAVGKWLQQTDPSQEMTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQQA----GSAGSGVHYDGPLDVVKK-LYKQGGISSIYRG 168          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.681e-28
Identity = 75/179 (41.90%), Postives = 98/179 (54.75%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPQWHVRFKG 827
            KD  +GTV GAA L  GHPFDTI+V+LQ+   P+        G M+  + TI  EG  GLYKG+ +PL  +    A+LF   GQM+ LL+     PLTV Q  I G  AGV  S +  P EL+KCRLQ Q+            KY G +D   ++L+ EGG+RG ++G  P     F G
Sbjct:    8 KDSIAGTVAGAACLFTGHPFDTIRVRLQTSNTPI--------GIMECFRNTIKYEGFSGLYKGVTSPLFGMMFETAVLFAGYGQMKVLLQKDENTPLTVGQCAIAGGFAGVGASVVLTPVELVKCRLQVQTT--------GPQKYKGSLDCLVQILK-EGGIRGAYRGFTPTIAREFVG 169          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCAT_MACFA (Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.681e-28
Identity = 87/240 (36.25%), Postives = 121/240 (50.42%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPQWHVRFKGCCHGLVCMEWVKK*MAGSQDTSPLGKRNSVFG--RWLIWELVSGFPGY----PPEVFQEGF 992
            K+L +G  GG   +  GHP DT+KV+LQ+QP  LPGQPP Y+G  D  ++T+  EG RGLY+GM AP+  V    A+ F   G  + L +  P   L+  Q    G  +G+  + +  P E IKC LQ Q   A SG+     KY G +D AK+ L  E G+RG++KG V              +  EWVK         +P GKR S     R L+   ++G   +    PP+V +  F
Sbjct:   12 KNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGIRGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGIFTTGIMTPGERIKCLLQIQ---ASSGE----TKYTGTLDCAKK-LYQEFGIRGIYKGTVVTLMRDVPASGMYFMTYEWVKNIF------TPEGKRVSELSVPRVLVAGGIAGIFNWAVAIPPDVLKSRF 237          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCAT_RAT (Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.449e-26
Identity = 71/168 (42.26%), Postives = 95/168 (56.55%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKG 794
            K+L +G  GG   +  GHP DT+KV+LQ+QP  LPGQPP Y+G +D  ++T+  EG  GLY+GM AP+  V    A+ F   G  + L +  P   LT  Q    G  +GV  + +  P E IKC LQ Q   A SG+     KY G +D AK+ L  E G+RG +KG
Sbjct:   12 KNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTIDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKRLQQKSPEDELTYPQLFTAGMLSGVFTTGIMTPGERIKCLLQIQ---ASSGK----NKYSGTLDCAKK-LYQEFGIRGFYKG 171          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCAT_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.449e-26
Identity = 86/240 (35.83%), Postives = 120/240 (50.00%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPQWHVRFKGCCHGLVCMEWVKK*MAGSQDTSPLGKRNSVFG--RWLIWELVSGFPGY----PPEVFQEGF 992
            K+L +G  GG   +  GHP DT+KV+LQ+QP  LPGQPP Y+G  D  ++T+  EG  GLY+GM AP+  V    A+ F   G  + L +  P   L+  Q    G  +GV  + +  P E IKC LQ Q   A SG+     KY G +D AK+ L  E G+RG++KG V              +  EW+K         +P GKR S     R L+   ++G   +    PP+V +  F
Sbjct:   12 KNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQIQ---ASSGE----SKYTGTLDCAKK-LYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIF------TPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRF 237          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: COLT_DROME (Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.189e-26
Identity = 69/168 (41.07%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKG 794
            K   +G  GG   ++ GHP DTIKV+LQ+ P P PG+ P Y G  D   +TI  EG RGLYKGM APL  VA   A+ F      + L +    A LT  Q  + G+ +G+  + +  P E IK  LQ Q    G        KY G +D A + L  EGGLR +FKG
Sbjct:   17 KSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGERIKVLLQTQQGQGGER------KYNGMIDCAGK-LYKEGGLRSVFKG 177          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCAT_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.390e-26
Identity = 70/170 (41.18%), Postives = 95/170 (55.88%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLV 800
            K+L +G  GG   +  GHP DT+KV+LQ+QP  L GQPP Y+G +D  ++T+  EG  GLY+GM AP+  V    A+ F   G  + L +  P   L+  Q    G  +GV  + +  P E IKC LQ Q   A SG+     KY G +D AK+ L  E G+RG +KG V
Sbjct:   12 KNLLAGGFGGMCLVFVGHPLDTVKVRLQTQPPSLSGQPPMYSGTLDCFRKTLMREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKSPEDELSYPQLFTAGMLSGVFTTGIMTPGERIKCLLQIQ---ASSGE----NKYSGTLDCAKK-LYQEFGIRGFYKGTV 173          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCFG_DICDI (Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.356e-24
Identity = 65/172 (37.79%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEAL---LRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGL 797
            KD+ +G++GG  Q+  GHP DTIKV+LQ+Q        P Y+G MD +K+TI+ EG  GLYKG+ +PL  ++  N+++F   GQ + L   L   P   L +      GA AG+A+ F+  P +L K ++Q Q         G   +Y    D AK++ +  GG+RG+F+GL
Sbjct:   15 KDIVAGSIGGVGQVFTGHPLDTIKVRLQTQSVG----NPIYSGTMDCLKKTISQEGFAGLYKGVASPLVGLSIMNSVMFLAYGQSKTLIQKLSDNPNEALDLKGLTAAGALAGIAIGFVDAPVDLFKSQMQVQQ--------GDKNQYKSTADCAKQIWK-VGGVRGVFQGL 173          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCATL_BOVIN (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.557e-23
Identity = 68/173 (39.31%), Postives = 93/173 (53.76%), Query Frame = 3
Query:  285 IAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQ-MEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLV 800
            +A D  +G  GG A ++ GHPFDT+KV+LQ Q      + P+Y G +   +  I  E   GLY+G+G+PL  +   NAL+F V+G  + AL R  P        Q + GA AG     + CP EL K RLQ Q A       G A  Y GP+D   ++ R E GLRG+ +G+V
Sbjct:    1 MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSV----EKPQYRGTLHCFQAIIKQESVLGLYRGLGSPLLGLTFINALVFGVQGNTLRALGRDSP------LNQFLAGAAAGAIQCVICCPMELAKTRLQLQEA-------GPARTYRGPLDCLAQIYRQE-GLRGVNRGMV 155          
The following BLAST results are available for this feature:
BLAST of DY305804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
MCAT_ARATH1.169e-7661.18Mitochondrial carnitine/acylcarnitine carrier-like... [more]
DIF1_CAEEL1.654e-3041.04Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 P... [more]
MCFS_DICDI7.681e-2841.90Mitochondrial substrate carrier family protein S O... [more]
MCAT_MACFA7.681e-2836.25Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCAT_RAT1.449e-2642.26Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCAT_HUMAN1.449e-2635.83Mitochondrial carnitine/acylcarnitine carrier prot... [more]
COLT_DROME7.189e-2641.07Congested-like trachea protein OS=Drosophila melan... [more]
MCAT_MOUSE9.390e-2641.18Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCFG_DICDI1.356e-2437.79Mitochondrial substrate carrier family protein G O... [more]
MCATL_BOVIN2.557e-2339.31Mitochondrial carnitine/acylcarnitine carrier prot... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305804 ID=DY305804; Name=DY305804; organism=Citrus sinensis; type=EST; length=1192bp
GCCCATTACCTACCTCCTTCCTTTTTAGTACCTTTTTTTTCTATTGTCAT
TCCTTTTTTTCTCTCATTAAAAAAGTAAACCCGGAAGAAAAAATAAGAAA
AATTAAACCCAGTTCCTTTTTCCTGGCGTATTTTTAATTTGTATACCCTC
CTTTTAATCTAATACTTTGTGTTTTCTCAAATTGAATCATTTGAGGGAAA
CAACTTTTCTCCACTTAGATTCGGTTGCCGTTCTCGGGGCTCTGCTTACT
CCGGTGCCAGTGAGAATCGGCTCTGATGGGAGACATAGCCAAGGATCTAT
TTTCTGGGACTGTTGGAGGGGCAGCACAATTAATATGTGGGCACCCATTT
GATACCATCAAGGTCAAGCTTCAAAGCCAGCCTGCTCCACTCCCTGGCCA
ACCTCCCAAGTATGCTGGTGCCATGGATGCTGTCAAGCAAACCATAGCTG
CCGAAGGGCCAAGGGGCTTGTACAAAGGTATGGGAGCTCCACTAGCTACT
GTTGCCGCTTTTAATGCCCTCCTATTTACAGTGAGAGGACAAATGGAGGC
ACTGCTCAGATCTCAACCTGGTGCCCCACTAACCGTCAACCAGCAGATTA
TTTGCGGGGCTGGGGCTGGTGTTGCTGTTTCTTTTCTTGCTTGCCCCACA
GAATTGATCAAATGCAGGTTGCAAGCCCAAAGTGCATTAGCAGGTTCTGG
CCAAGTTGGTGTGGCAGTGAAGTATGGTGGACCAGTGGATGTGGCTAAGC
GTGTTCTTAGATCAGAAGGCGGTCTTAGGGGTCTCTTCAAGGGCCTGGTC
CCACAATGGCACGTGAGGTTCAAGGGATGCTGCCATGGTTTGGTGTGTAT
GGAATGGGTGAAAAAGTAAATGGCAGGAAGCCAAGACACCTCCCCATTGG
GAAAAAGGAACAGTGTTTTTGGGAGGTGGTTAATCTGGGAGCTTGTTTCC
GGGTTCCCTGGTTACCCCCCTGAAGTTTTTCAAGAGGGGTTTTTCGGGGT
GAATAAATTACAAAATCCCCCAATTCCTCTGGGTTCCTTTGAAGCCCTTT
CAAAAAAATCCCGAAAAACCAAAAGGGGTCGCAAGGGTTTGGTAAAAGGG
GTTTCCCCCCCCGGCCCCGGGGGCCCAAAAAAGGTTTTCCCGCGGCAAAA
GGCGCGCGAGGGTTTCTCCTTTGGGGCCGTAAAAAGAAAGGT
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