DY305803

Overview
NameDY305803
Unique NameDY305803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1267
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305803_ssr506 microsatellite DY305803_ssr506:506..521. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6748 contig Csv1_Contig6748:1..1267. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.569e-34
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 2
Query:  137 MAEVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPSLMPNNPYDRAQARFWIKFAEDK 448
            MAEVKL G   SPF +RV WALK+KGV YEF+ EDL NKS LLL+ NP+HKKIPVL+H GK +CESMVILEYI+E + + PS++P +PYDRA ARFW K+ EDK
Sbjct:    1 MAEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF-EGPSILPKDPYDRALARFWAKYVEDK 103          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.049e-34
Identity = 71/105 (67.62%), Postives = 85/105 (80.95%), Query Frame = 2
Query:  137 MAEVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPSLMPNNPYDRAQARFWIKFAEDKV 451
            MAEVKL G   SPF +RV WALKLKGV YE++ ED  NKS+LLL+ NPVHKK+PVL+H GKP+ ESMVILEYI+ET+ + PS++P +PYDRA ARFW KF  DKV
Sbjct:    1 MAEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF-EGPSILPKDPYDRALARFWSKFLGDKV 104          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.017e-33
Identity = 68/105 (64.76%), Postives = 86/105 (81.90%), Query Frame = 2
Query:  137 MAEVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPSLMPNNPYDRAQARFWIKFAEDKV 451
            MAEVKL G   SPF +RV WALK+KGV YE++ ED  NKS+LLL+ NPV+KK+PVL+H GKP+ ESM+ILEYI+ET+ + PS++P +PYDRA ARFW KF +DKV
Sbjct:    1 MAEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF-EGPSILPKDPYDRALARFWAKFLDDKV 104          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 6.592e-33
Identity = 68/105 (64.76%), Postives = 84/105 (80.00%), Query Frame = 2
Query:  137 MAEVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPSLMPNNPYDRAQARFWIKFAEDKV 451
            MAEVKL G   SPF  RV WALK+KGV YE++ ED  NKS+LLL+ NP+HKK+PVL+H GK + ESMVILEYI+ET+ + PS++P +PYDRA ARFW KF +DKV
Sbjct:    1 MAEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF-EGPSILPKDPYDRALARFWAKFLDDKV 104          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.120e-31
Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 2
Query:  143 EVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPSLMPNNPYDRAQARFWIKFAEDKV 451
            +VKL G + SPFV RV  ALKLKGV Y+F+ E+L NKS LLLKYNPVHKK+PV VH  +P+ ES+VI+EYI+ETW  NP ++P++PY RA ARFW KF +DK+
Sbjct:    7 DVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNP-ILPSDPYQRALARFWSKFIDDKI 108          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 5.223e-30
Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 2
Query:  143 EVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPSLMPNNPYDRAQARFWIKFAEDKV 451
            EVKL G   SPF  RV  ALKLKG+PYE+V E L NKS LLL  NP+HKK+PVLVH GK + ES VILEYI+ETWPQNP ++P +PY+R++ARF+ K  ++++
Sbjct:    6 EVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNP-ILPQDPYERSKARFFAKLVDEQI 107          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.169e-27
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 2
Query:  143 EVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWP----QNPSLMPNNPYDRAQARFWIKFAEDKVR 454
            E+KL G   SP+  RV   L LK +PYE+V E+L +KS LLL  NPVHK +PVL+H G+PV ES VI++YI+E WP      PS+MP++PY+RA ARFW  + +DKVR
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVR 113          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 7.059e-27
Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 2
Query:  143 EVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQN-PSLMPNNPYDRAQARFWIKFAEDKVRS---QLWQTR 475
            EV L    PS F  R+  AL  K + YE+  EDL NKS LLL+ NP+HKKIPVL+H GKP+CES++ +EYIEE W    PSL+P++PYDRAQARFW  + + K+     +LW T+
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATK 119          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.573e-26
Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 2
Query:  143 EVKLHGALPSPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQN-PSLMPNNPYDRAQARFWIKFAEDKVRS---QLWQTR 475
            EV L    PS F  R+  AL  K + YE+  EDL NKS LLL+ NP+HKKIPVL+H GKP+CES++ +EYIEE W    P+L+P++PYDRAQARFW  + + K+     +LW T+
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTK 119          
BLAST of DY305803 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.271e-25
Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 2
Query:  170 SPFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPSLMPNNPYDRAQARFWIKFAEDKVRS 457
            S F  R+  AL LKG+ YE   E+LS+KS LLL+ NPVHKKIP+L+H GKP+CES+ ILEYI+E W +   L+P++PY R+QARFW  + ++K+ S
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYS 109          
The following BLAST results are available for this feature:
BLAST of DY305803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX1_SOLTU1.569e-3467.31Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX3_TOBAC2.049e-3467.62Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC1.017e-3364.76Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC6.592e-3364.76Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN2.120e-3163.11Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXA_ARATH5.223e-3061.17Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU6_ORYSJ3.169e-2754.63Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTXC_TOBAC7.059e-2753.04Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX4_TOBAC1.573e-2652.17Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_NICPL2.271e-2555.21Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BF07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305803 ID=DY305803; Name=DY305803; organism=Citrus sinensis; type=EST; length=1267bp
GGAAAATTGAAGCTTTCTGCTCAAGAAAGTGCATACCATAAATCACTATA
AATTCAGAAACATATGTAATGAGTTAACAGCCATACACAACATCGATCAG
AAAAACCGATAATTCAAATTCAATCTTAGAATTATCATGGCTGAAGTGAA
GCTTCATGGGGCCCTGCCGAGTCCATTTGTTTACAGGGTGATTTGGGCTC
TGAAATTGAAAGGCGTACCATATGAATTTGTTTCCGAAGATCTCTCAAAC
AAAAGTGCATTGCTTTTGAAGTATAATCCAGTTCACAAGAAGATCCCAGT
GCTCGTCCATGGCGGAAAACCAGTTTGTGAGTCCATGGTTATTCTCGAAT
ACATCGAAGAGACGTGGCCACAGAATCCCTCCTTGATGCCAAATAATCCT
TATGATAGGGCTCAAGCTCGATTTTGGATCAAATTCGCTGAAGACAAGGT
TCGCTCACAACTCTGGCAAACACGTTTATGATTAAGTTCGTTCTTTTCAA
ATTTGTTTATTTATTTATTTATTTTAAGATCTAGATTAGGTGACGAGGAT
AATGAAACCCACCCACCAAACACTAAATCTTACTCTCCGTATATACTCGA
ACTCGGGTGATGGCGGAAGTGAATTCATAGCCAGTCGAGCCCAGCCACCC
AGGGGTCTCCTTCATATTTATTTGTAAAAAGTTCTCTAAACTTTCAATTT
CTGGTGTCTTCACTGTTTTATCCTTAAATATGAAAAGATGTAATAAGTTA
AAGTTAACACAACCGTTTTTAACTTCACGGGGAATTTTGATGACTTTTTG
AACATTGGGAAAAAGTGAATTTACTAGCTAATGACAGATTTTACAACTCA
GTGGTTGAACTCTCTTAATTAACTTATTAAACCTCTAAATAAAGGGTCTT
GTGGACCGTGGTGCTATTGGCTAACGATATTTCACTTTTAAATACATATT
ATTAATTTAATCCTGTCCGTGAAAAAAACCAAGGAAAAATAATTGGGGGG
AGGGGGGTTTCCGGTTTGGAAAAAGGTTTTCTAACCCTTGGACCAAAAAA
TACAAAAACCAAATGAAGGGAAACCTTGGGAAATGCTTCAAAAACCTTAA
AAGAAACAGTGGTGTGGGGAAAAAAAAAAATTTTTTAAGTGGGAAAAAAA
AATTTGGCCTAAATGGGACCCAAAAACGTTTGGGTTTCCAAATTTGTTGT
TATTGGGGTTTTGAAAAGGTATTTTTTTATGAAAAAAAATAAAAAGGGGG
TGGGGGCGCCCCCCAAA
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