DY305798

Overview
NameDY305798
Unique NameDY305798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1193
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305798_ssr2 microsatellite DY305798_ssr2:2..13. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 1.409e-76
Identity = 140/212 (66.04%), Postives = 164/212 (77.36%), Query Frame = 3
Query:  159 FMLCTLLVSAVASRSRVTHQTTEADADRVRD-----LPGQPKVEFKHYAGYVKLRPND-HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINL*G 776
            ++LC L++ A+A   +   + T + + R  D     LPGQP V FKHYAGYV L P    KALFYWFFEAQ+  S +PLVLWLNGGPGCSSIAYGAAQELGPFLV  NG +L +N +SWNK ANMLFLEAPVGVGFSYTNNS DL KLGD+VTA+DS AFLI WF +FP F+S +FYI+GESYAGHYVPQLAE+I++RN +  KDS INL G
Sbjct:    7 WLLCILVLPAIACGRKPEKKVTISSSGRKEDDLVTGLPGQPPVNFKHYAGYVNLGPEQKQKALFYWFFEAQQNSSRRPLVLWLNGGPGCSSIAYGAAQELGPFLVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGESYAGHYVPQLAEVIYDRNKKVTKDSSINLKG 218          

HSP 2 Score: 24.6386 bits (52), Expect = 1.409e-76
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  767 SLRGSWMGNAVINDPTEHQG 826
            +L+G  +GNAVIN+ T+  G
Sbjct:  215 NLKGFMIGNAVINEATDMAG 234          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 1.814e-69
Identity = 123/183 (67.21%), Postives = 146/183 (79.78%), Query Frame = 3
Query:  234 ADRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGS-RLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINL*GV 779
            ADRV++LPGQP V+F+ YAGYV +     +ALFYWFFEA +  S KP++LWLNGGPGCSSI +GAA+ELGPF    +   +LK N YSWNKAAN+LFLE+PVGVGFSYTN S D+ +LGD VTA DSY FL+ WFKRFP +KSHDFYIAGESYAGHYVPQL+ELI++ N  A K  FINL G+
Sbjct:   49 ADRVKELPGQPPVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGAAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGESYAGHYVPQLSELIYKENKIASKKDFINLKGL 231          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 2.294e-64
Identity = 119/203 (58.62%), Postives = 142/203 (69.95%), Query Frame = 3
Query:  129 MGSTSNCLLCFMLCTLLVSAVASRSRVTHQTTEADADRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERN 737
            M + SN  +   LCTL          V+  + EA  D V + PGQPKV F+HYAGYV +     +ALFYWFFEA    + KPLVLWLNGGPGCSS+ YGA QE+GPFLV   G+ LKFN Y+WNK AN+LFLE+P GVGFSY+N S D  KLGD  TA DSY FL  WF RFP +K  DF+IAGESYAG YVP+LAE+I+++N
Sbjct:    1 MMNISNVSIALYLCTLFAF-------VSSDSPEAMRDLVTNFPGQPKVSFRHYAGYVTVNIISGRALFYWFFEAMTHPNVKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNKGNSLKFNPYAWNKEANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAYKEKDFFIAGESYAGKYVPELAEVIYDKN 196          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.259e-62
Identity = 120/223 (53.81%), Postives = 146/223 (65.47%), Query Frame = 3
Query:  141 SNCLLCFMLCTLLVSAVASRSRVTHQTTEA-------DADRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE---RNIRAGKDSFINL*GV 779
            SN L      TLL+ A        H+           + D V  LPGQP V F+HYAGYV +  ++ +A+FYWFFEA      KPLVLWLNGGPGCSS+ YGA QE+GPFLV  NG+ L FN Y+WNK ANMLFLE+PVGVGFSY+N S D  KLGD  TA D+Y FL  WF++FP  K + FYIAGESYAG YVP+LAE++++    N + G    INL G+
Sbjct:   10 SNLLTSLCFTTLLILAPVVICTRQHRFDSPKRSLLANEQDLVTGLPGQPDVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGNGLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPELAEVVYDNNNNNKKNGSSFHINLKGI 232          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 5.289e-61
Identity = 117/206 (56.80%), Postives = 148/206 (71.84%), Query Frame = 3
Query:  174 LLVSAVASRSRVTHQTTEADA---DRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEA-QKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINL*G 776
            LL+ ++     + HQ    +A   D+V +LP QP   +  H++GYV +   + ++LF+WFFEA  +  S++PLVLWLNGGPGCSSI YGAA ELGPF V  NG+ L FN+YSW + ANMLFLE+PVGVGFSYTN+S DL  L D   A D+Y F++ WF R+P +KS DF+IAGESYAGHY PQLAELI++RN    KDSFINL G
Sbjct:    7 LLIISLLILLSLLHQDYHIEAQNSDKVVNLPEQPLNPKISHFSGYVNVNQENTRSLFFWFFEALSESPSTRPLVLWLNGGPGCSSIGYGAASELGPFRVVENGTSLSFNQYSWVQEANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHYSPQLAELIYDRNKVQPKDSFINLKG 212          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 3.428e-60
Identity = 114/212 (53.77%), Postives = 148/212 (69.81%), Query Frame = 3
Query:  150 LLCFMLCTLLVSAVASRSRVTHQTTEADADRVRDLPGQPK-VEFKHYAGYVKLRPNDHKALFYWFFEAQ--KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINL*G 776
            LL  +L T+  S  A+ S    +      DR+ +LPGQP  V+F+ Y+GYV +     +ALFYW  E+   +   S+PLVLWLNGGPGCSS+AYGAA+E+GPF VG +G  L    Y+WNK AN+LFLE+P GVGFSY+N + DL+  GDQ TA DSY FL+ WF+RFP +K  +FYI GESYAGH+VPQL++L+HERN +  K+  INL G
Sbjct:    6 LLIILLLTISTSCCAAPSSYVEEQLR---DRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQLSKLVHERN-KGFKNPAINLKG 213          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 2.222e-59
Identity = 109/195 (55.90%), Postives = 132/195 (67.69%), Query Frame = 3
Query:  153 LCFMLCTLLVSAVASRSRVTHQTTEADADRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERN 737
            L F    +LV  V+   +        +AD V +LPGQP V FKHYAGYV +  ++ +ALFYWFFEA      KPLVLWLNGGPGCSS+ YGA QE+GPFL   N   L FN Y+WNK  NMLFLE+PVGVGFSY+N S D   L D     D+Y FL  WF++FP  K ++FYIAGESYAG YVP+LAEL+++ N
Sbjct:   15 LWFTALLILVEMVSCARQHRRSFLAKEADLVTNLPGQPDVSFKHYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLADTNEKGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGIYVPELAELVYDNN 209          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.457e-58
Identity = 110/202 (54.46%), Postives = 142/202 (70.30%), Query Frame = 3
Query:  174 LLVSAVASRSRVTHQTTEADADRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQK-GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINL*G 776
            LLV+ +++    +  + E + DR++ LPGQPKV F  Y+GYV +  +  +ALFYW  E+      +KPL+LWLNGGPGCSSIAYGA++E+GPF +   GS L  NK++WNK AN+LFLE+P GVG+SYTN S DL   GD+ TA D+  FLI W  RFP +K  DFYIAGESYAGHYVPQLA+ I++ N +A     INL G
Sbjct:   10 LLVALLSTTFPSSSSSREQEKDRIKALPGQPKVAFSQYSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESPAGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQLAKKINDYN-KAFSKPIINLKG 210          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.457e-58
Identity = 113/209 (54.07%), Postives = 142/209 (67.94%), Query Frame = 3
Query:  153 LCFMLCTLLVSAVASRSRVTHQTTEADADRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQK-GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINL*G 776
            L F+L  LL  A +S S     T E + DR++ LPGQPKV F  ++GYV +  +  ++LFYW  E+      +KPL+LWLNGGPGCSSIAYGA++E+GPF +   G  L  N +SWN  AN+LFLE+PVGVGFSYTN S D  + GD+ TA ++  FLI W  RFP ++  DFYI GESYAGHYVPQLA+ IHE N  A K+  INL G
Sbjct:    6 LLFLLFVLLSLATSSTS-----TKEQEEDRIKALPGQPKVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLAQKIHEYN-NAYKNPVINLKG 208          
BLAST of DY305798 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 5.126e-58
Identity = 107/183 (58.47%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  237 DRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE--LIHERNIRAGKDSFINL*GV 779
            D +R LPGQP V F  Y GYV +  +  ++ FY+F EA K   S PL+LWLNGGPGCSS+AYGA QELGPF V  +G  L  N+Y+WN AAN+LFLE+P GVGFSYTN + DL K GD+ TA D+Y FL+ W +RFP +K  D YIAGESYAGHYVPQLA   L+H R       SF NL G+
Sbjct:   80 DLIRRLPGQPPVSFDQYGGYVTVNESAGRSFFYYFVEASKSKDSSPLLLWLNGGPGCSSLAYGALQELGPFRVHSDGKTLFRNRYAWNNAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAGESYAGHYVPQLAHTILLHHR-------SFFNLKGI 255          

HSP 2 Score: 25.7942 bits (55), Expect = 5.126e-58
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  767 SLRGSWMGNAVINDPTEHQG 826
            +L+G  +GNAVIND T+  G
Sbjct:  251 NLKGILIGNAVINDETDLMG 270          
The following BLAST results are available for this feature:
BLAST of DY305798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SCP35_ARATH1.409e-7666.04Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP34_ARATH1.814e-6967.21Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP32_ARATH2.294e-6458.62Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
SCP31_ARATH1.259e-6253.81Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP33_ARATH5.289e-6156.80Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP27_ARATH3.428e-6053.77Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP30_ARATH2.222e-5955.90Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
SCP24_ARATH2.457e-5854.46Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP22_ARATH2.457e-5854.07Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP40_ARATH5.126e-5858.47Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BE12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305798 ID=DY305798; Name=DY305798; organism=Citrus sinensis; type=EST; length=1193bp
CTCTTCTTCTTCTTCACTTTCCCACGAGCACGCACTCTCTCTAGTCTCCA
TACACACAGGCTCCGGTAAATTAACTAAAAGAACAGATTTTTGAGCTGTG
TGATTGAATTTGAGGCGCAGTAGCTTCAATGGGAAGTACGAGCAACTGTC
TACTTTGTTTCATGCTTTGTACGCTGCTAGTTTCTGCCGTGGCTTCTAGA
AGCAGAGTAACTCATCAAACAACTGAAGCAGATGCAGATAGAGTGAGGGA
CCTGCCGGGTCAACCCAAAGTTGAGTTCAAACACTATGCCGGGTACGTGA
AGCTCCGGCCGAACGACCACAAAGCTTTGTTCTACTGGTTCTTTGAAGCC
CAAAAGGGAGTTTCTAGCAAGCCTCTAGTTCTTTGGCTCAATGGAGGGCC
TGGCTGCTCGTCGATAGCCTATGGAGCTGCACAAGAACTTGGACCATTCC
TGGTTGGTGGCAATGGAAGTCGACTCAAATTCAACAAATATTCTTGGAAC
AAAGCTGCCAATATGCTGTTCTTGGAGGCTCCAGTGGGTGTAGGCTTTTC
ATACACCAACAATTCTGAAGATTTACATAAACTTGGCGATCAAGTTACAG
CAAATGATTCTTATGCATTCTTGATTGGATGGTTCAAAAGATTTCCAAAC
TTCAAATCCCATGACTTTTACATTGCTGGAGAAAGCTATGCCGGTCATTA
TGTTCCTCAACTTGCTGAGCTCATTCACGAAAGAAACATAAGAGCTGGCA
AAGACTCATTTATAAATCTTTAAGGGGTTCATGGATGGGGAATGCCGTGA
TCAATGATCCCACCGAACACCAAGGGCCTAGGTGGATTATGCCATGGAGT
CCTGCAAATTATATCAAACAAACTCTACAAAGATATAAAACCAGGGAAGG
TGAATTTTGGGCAAAGCATGATAAGAAACCATTGGCAAGGATCCTAATCC
AAAGGCTTTGGTTGAAACCTAAGGCTGAAATTGAACTCTAACGCCATTAA
CCCCCCCGGTTTGGTTTGGAATTCCTCTGGAAGGGAAAGCTCCCCCCCAA
AACGGGATAGGTCCCCCCCCTCATCCCCTGGGCTCCAAAATGGACCCGGG
GGGGGAAAGGGGACAACGCGCCGGGGGAAAACAAAAACCGGGGGGGCGGG
GAAAAAAAAAAAATTTGGGTAGAGAAAAATTTTCTTTCTCCCA
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