DY305792

Overview
NameDY305792
Unique NameDY305792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_ARATH (Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.665e-27
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 178
            RVKCN+DDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Sbjct:   15 RVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN 73          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_PSAOB (Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            RVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:   15 RVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_MOUSE (Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            RVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:   15 RVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_MESAU (Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            RVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:   15 RVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_HUMAN (Ubiquitin-like protein 5 OS=Homo sapiens GN=UBL5 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            RVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:   15 RVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_BOVIN (Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            RVKCN DDTIGDLKKL+AAQTGTR +KI ++KWY I+KDH++L DYEIHDGM LELYY
Sbjct:   15 RVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_DANRE (Ubiquitin-like protein 5 OS=Danio rerio GN=ubl5 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.416e-20
Identity = 43/58 (74.14%), Postives = 53/58 (91.38%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            RVKCN++DTIGDLKKL+AAQTGTR +KI ++KWY I+K+H++L DYEIHDGM LELYY
Sbjct:   15 RVKCNQEDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKNHVSLGDYEIHDGMNLELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_CAEEL (Ubiquitin-like protein 5 OS=Caenorhabditis elegans GN=ubl-5 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.030e-20
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            R+KCN  DTIGDLKKL+AAQTGTR +KI ++KWY IYKDHITL DYEIH+G   ELYY
Sbjct:   15 RIKCNPSDTIGDLKKLIAAQTGTRWEKIVLKKWYTIYKDHITLMDYEIHEGFNFELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: UBL5_DROME (Ubiquitin-like protein 5 OS=Drosophila melanogaster GN=ubl PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.181e-20
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 175
            RVKCN DDTIGDLKKL+AAQTGT+ +KI ++KWY I+KD I L DYEIHDGM LELYY
Sbjct:   15 RVKCNPDDTIGDLKKLIAAQTGTKHEKIVLKKWYTIFKDPIRLSDYEIHDGMNLELYY 72          
BLAST of DY305792 vs. ExPASy Swiss-Prot
Match: HUB1_SCHPO (Ubiquitin-like modifier hub1 OS=Schizosaccharomyces pombe GN=hub1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.593e-18
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 2
Query:    2 RVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 178
            RVKC  DDT+GD KKLVAAQTGT   +I ++KW++++KD+ITL DYEIHDGM LE+YYS
Sbjct:   15 RVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADYEIHDGMSLEMYYS 73          
The following BLAST results are available for this feature:
BLAST of DY305792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UBL5_ARATH2.665e-2794.92Ubiquitin-like protein 5 OS=Arabidopsis thaliana G... [more]
UBL5_PSAOB6.358e-2177.59Ubiquitin-like protein 5 OS=Psammomys obesus GN=UB... [more]
UBL5_MOUSE6.358e-2177.59Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 P... [more]
UBL5_MESAU6.358e-2177.59Ubiquitin-like protein 5 OS=Mesocricetus auratus G... [more]
UBL5_HUMAN6.358e-2177.59Ubiquitin-like protein 5 OS=Homo sapiens GN=UBL5 P... [more]
UBL5_BOVIN6.358e-2177.59Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=... [more]
UBL5_DANRE2.416e-2074.14Ubiquitin-like protein 5 OS=Danio rerio GN=ubl5 PE... [more]
UBL5_CAEEL7.030e-2074.14Ubiquitin-like protein 5 OS=Caenorhabditis elegans... [more]
UBL5_DROME9.181e-2075.86Ubiquitin-like protein 5 OS=Drosophila melanogaste... [more]
HUB1_SCHPO8.593e-1867.80Ubiquitin-like modifier hub1 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BE03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305792 ID=DY305792; Name=DY305792; organism=Citrus sinensis; type=EST; length=928bp
GCGCGTGAAGTGCAACGAAGACGACACCATAGGCGACTTGAAGAAGCTGG
TGGCGGCTCAGACCGGGACTCGAGCCGACAAGATTCGGATTCAGAAGTGG
TACAACATCTACAAGGACCACATCACTCTCAAGGACTACGAGATTCACGA
CGGCATGGGCCTCGAACTCTATTACAGCTAAATCCACCGTTAAATATATA
TGCTGCTGCAAGCAGTCAATACTACTAGGAACCATATGCCATAATAAGCA
AGGGGTATTGGAAGATGCGGCAGGGCCAACTTTACTAATACTGTCTTGTA
AGAAAAAATTTGTGAAGACTTGTAAAAACTTATTTGTGGTTATGTAACAT
ATCTGGGATCTGGACTTACTCTCCATTTTGAATGGTGTTTAGATCTTTAT
CAAGGTATTGAGGTACCACATACTTGTCAGTCCATTAGGCTGATAGAATT
TTGTGAATACCTTGGCTAAGTGTGTGCCATCTTTCTTGCATAAAAATGGT
AGATGATCCATTAGTGAGTTGCTGTGTATGTCTATCTTGTATATCAACTA
CAAAACTTGTGTGGTTGATTTCTGCAGGTGGTGCAGAAAAGGCGATGAGA
GTTGAGCTTATTATTTTTTACCAAATTGACAAACCTTTTGGGATAATTGG
TTTTGCTCCATTTATGGTCAACGGGCTCAATATGACGCCCACTAGAAAAG
CTTCATTTCATTCTGGGTGGGCCGGATCCTGCAGCCAAACTTGCTTCGAT
GTTGAAGTATTTTAGCAGGGTGTGATTTTTTGTTTCAACATTTGGCGTTA
GACAGTTTGCCATTTGTAATTGTAATTCTCAATCTTCATTTCATATCAAA
AAATTGGTGGGAAAAACTTCCTAAAGGACAATCACAGATTTGAAAGACCC
TTGGCGAGGTTTGTGAATGGAGAATTTT
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