DY305784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe GN=SPBC23E6.02 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.055e-43 Identity = 102/297 (34.34%), Postives = 169/297 (56.90%), Query Frame = 3 Query: 3 FRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPISKN--PVKGYKKLQAVLKTIMLRRTKGTLLDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGFDSNSLLRSSVEMAKKLPQERQMY--LLNCLEASLAI-CGICNDPPEDAVVSI-CGHVFCNQCICERLTADDN---QCPTRNCKIRLSLSSVF--SKATLNNSLSQRQPGQEIPTDYSDSKL 860 +RV+LDEAQ+IKN T AR C L + RWCLSGTP+QN +++ YS +FLR P++ + SF +P+S N K+ + +LK ++LRRTK T +DG+PI+ LPPK + + D + E +FY+ L+ ++ Q ++Y GT+ +Y ++L++LLRLRQAC HP L+ ++ S + AK Q+Y +N L+ + C +C D + ++ + CGH C +C+ +T+ ++ Q N + S+ + ++ L+ +L +R G P +D+KL Sbjct: 534 YRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGVEEFYSLIKFLRIKPYSDWSSFSKDFTIPLSSNINTSAPMKRFRGLLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLRLRQACCHPWLIVAREAAVDDNDSFQ-AKNRAIYNQIYPEAVNRLKLIETLQCSLCMDVVAELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKCSVCEEYIDTERLLSYALFRRYSGM-APIVDADNKL 828
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.599e-42 Identity = 100/251 (39.84%), Postives = 143/251 (56.97%), Query Frame = 3 Query: 3 FRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPISKNPVKGYKKLQAVLKTIMLRRTK-GTLLDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKG-------FDSNSLLR-------SSVEM-AKKLPQER--QMYLLNCLEASLAICGICNDPPEDAVVSICGHVFCNQCI 701 FR+VLDEA +IKN ++Q++ A L A RRWCL+GTPIQN ++DLYS RFLR +P+ + + +++ P + +G K +Q++LK IMLRRTK T +G PI+ LPP + + ++ ERDFY L S+ +F ++ G V NY +IL +LLRLRQ CDHP LV D N L + S +E K +P E Q + + C IC + EDAV++ C H C +C+ Sbjct: 568 FRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKDVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECL 818
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: RAD5_SCHPO (DNA repair protein rad5 OS=Schizosaccharomyces pombe GN=rad8 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.177e-40 Identity = 92/256 (35.94%), Postives = 146/256 (57.03%), Query Frame = 3 Query: 3 FRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPI-SKNPVKGYKKLQAVLKTIMLRRTKGTL-LDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKG-------FDS--------NSLLRSSVEMAKKLPQE-RQMYLLNCLEASLAICGI-CNDPPEDAVVSICGHVFCNQCICERL 713 FRVVLDE +I+N ++ A+AC + ++ RW ++GTPI N +DDLYS +F+RY+P+ Y + + + +P SK+ +K +Q++L+ ++LRRTK T +G I+ LPPK + ++ +DF+D ER Y L ++ AGT+ +NY IL +LLRLRQAC P+L+ FD NSL+ V K +P + ++ L EA + C I CN+P ++ ++ C H C C+ E + Sbjct: 651 FRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLDDLYSLIKFMRYEPWCNYTYWQTFVSLPYQSKDVLKALNVVQSILEFLVLRRTKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRLRQACCDPVLLSNMTINSETFDDFEFSVEQFNSLINQFVVTGKPIPSDILKIDTLKSFEALITECPICCNEPIQNPLLLNCKHACCGDCLSEHI 906
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.588e-39 Identity = 89/248 (35.89%), Postives = 144/248 (58.06%), Query Frame = 3 Query: 3 FRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPISKNPVKGYKKLQAVLKTIMLRRTKGTL-LDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKG-------FDSNSLLRSSVE-----MAKKLPQER--QMYLLNCLEASLAICGICNDPPEDAVVSICGHVFCNQCI 701 +R+VLDEA +IK+ +TQ A+A + L + RWCL+GTP+QN ++DLYS FL +P+ + + +I+ P +G K ++A+L+ +MLRRTK T +G I+ LPP + + + + ++ ERDFY+ L S+ QF ++ A G V NY NIL +LLRLRQ C+HP LV D +SL R ++ +++ P + + + + + C IC + +D V++ C H C +C+ Sbjct: 817 YRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECL 1064
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: SM3L1_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 OS=Arabidopsis thaliana GN=At5g05130 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.022e-38 Identity = 89/259 (34.36%), Postives = 139/259 (53.67%), Query Frame = 3 Query: 6 RVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPISKNPVKGYKKLQAVLKTIMLRRTKGTLLDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGFDSNSLLRSSVEMAKKLPQERQMYLLNCLEASLAICGICNDPPEDAVVSICGHVFCNQCICERLTADDNQCPTRNCKIRLSLSSVFS 782 R++LDEA +IKN Q +R L+A RRW ++GTPIQN DLYS FLR++PF++ + S+I+ P+ + KG +LQ ++ TI LRRTK + +I LPPK + V+ + EER Y +E ++ + G++ +NY +L ++LRLRQ CD L + +SVE P+ Q + + C IC PP + +++ C H+FC CI + L CP C+ L+ S +++ Sbjct: 433 RIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTK-----EKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPL--CRGSLTQSDLYN 684
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: HLTF_MOUSE (Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.743e-38 Identity = 88/248 (35.48%), Postives = 141/248 (56.85%), Query Frame = 3 Query: 6 RVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPISKNPVKGYKKLQAVLKTIMLRRTKGTLLDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHP-LLVKGFDSNSLLRSSV-EMAKKLPQERQMYLLNCLEASLAICGICNDPPEDAVVSICGHVFCNQCICERLTADD--NQCP 737 RV+LDE +I+N Q +A L A+RRW L+GTPIQN++ DL+S FL+ PF + + +I+ P++ G ++LQ+++K I LRRTK + + G+P++ LP + + ++ + ++EER Y ++ + Y GTV +Y ++L +LLRLRQ C H LL G S+ RS E +K+ E+ +L+ S C IC D V++ C HVFC CIC+ + ++ +CP Sbjct: 547 RVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFIDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTNGMSSSGPSRSDTPEELRKMLIEKMKIILS--SGSDEECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCP 792
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: HLTF_HUMAN (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 8.653e-38 Identity = 89/253 (35.18%), Postives = 140/253 (55.34%), Query Frame = 3 Query: 6 RVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPISKNPVKGYKKLQAVLKTIMLRRTKGTLLDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHP-LLVKGFDSNSLLRSSV--EMAKKLPQERQMYLLNCLEASLAICGICNDPPEDAVVSICGHVFCNQCICERLTADDNQCPTRNCKI 755 RV+LDE +I+N Q +A L ++RRW L+GTPIQN++ DL+S FL+ PF + + I+ P++ G ++LQ+++K I LRRTK + + G+P++ LP + + ++ + +DEER Y ++ R Y GTV +Y ++L +LLRLRQ C H LL SN + E+ KKL ++ ++ L + S C IC D V++ C HVFC CIC+ + N+ P C + Sbjct: 553 RVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSS---GSDEECAICLDSLTVPVITHCAHVFCKPCICQVI---QNEQPHAKCPL 799
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: HLTF_RABIT (Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.476e-37 Identity = 88/253 (34.78%), Postives = 141/253 (55.73%), Query Frame = 3 Query: 6 RVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPISKNPVKGYKKLQAVLKTIMLRRTKGTLLDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGFDSNSLLRSS---VEMAKKLPQERQMYLLNCLEASLAICGICNDPPEDAVVSICGHVFCNQCICERLTADDNQCPTRNCKI 755 RV+LDE +I+N Q +A L A+RRW L+GTPIQN++ DL+S FL+ PF + + I+ P++ G ++LQ+++K I LRRTK + + G+P++ LP + + ++ + +DEER Y ++ + Y GTV +Y ++L +LLRLRQ C H L+ S+S + E+ KKL ++ ++ L + S C IC D V++ C HVFC CIC+ + N+ P C + Sbjct: 550 RVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFVDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERPVFIQHITLSDEERKIYQSVKSEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNTVSSSGPSGNDTPEELRKKLIKKMKLILSS---GSDEECAICLDSLTVPVITHCAHVFCKPCICQCI---QNEQPHAKCPL 796
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: RAD5_EMENI (DNA repair protein rad5 OS=Emericella nidulans GN=rad5 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 4.748e-36 Identity = 91/269 (33.83%), Postives = 140/269 (52.04%), Query Frame = 3 Query: 3 FRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYKSFCSMIKVPI-SKNPVKGYKKLQAVLKTIMLRRTKGTLL-DGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVK-------------GFDSNSLLR----------------SSVEMAKKLPQERQMYLLNCLE----ASLAICGICNDPPE-DAVVSICGHVFCNQCI 701 FRV+LDEA IKN R++ ARAC+ L+A RW L+GTPI N ++DL+S RFLR +P+ + + + I P SK V+ +Q VL+ ++LRRTK +GEP++ LP + I +++V+ ++ER+ Y+ + ++ F AAGT+ ++Y I LLRLRQ C HP+L + D +S L+ S E + + P + + L S C IC++ P D V+ C H C C+ Sbjct: 649 FRVILDEAHIIKNRRSKTARACYDLKATHRWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWKTFITAPFESKEVVRAISVVQTVLEPLVLRRTKSMKTPEGEPLVPLPKRTIRIEKVELIEQEREIYNHIYTRAKQTFNSNVAAGTLLKSYSTIFAQLLRLRQTCCHPILTRNKAIVADEEDAAAAADQDSDLKDDMDLQELINRFTATTSDAESSNEPPDPSMKFTAHALRQIQTESAGECPICSEEPMIDPAVTACWHSACKGCL 917
BLAST of DY305784 vs. ExPASy Swiss-Prot
Match: RHP16_SCHPO (ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe GN=rhp16 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 6.201e-36 Identity = 105/296 (35.47%), Postives = 150/296 (50.68%), Query Frame = 3 Query: 3 FRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVY----------------KSFCS----------------MIKVPISKNPVKG-----YKKLQAVLKTIMLRRTKGTLLDGEPIINLPPKVIMLKQVDFTDEERDFYSQLEINSRDQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGFDSNSLLRSSVEMAKKLPQERQMYLLNCLEASLAICGICNDPPEDAVVSICGHVFCNQCICERLTA----DDNQCPTRNCKIRLSL 767 +R++LDEA IK+ ARA GLR R+ CLSGTP+QN I +L+S RFLR DPFA Y +S C M+K PI K +G +KK+ ++LK IMLRRTK L+ + LPP+V+ +++ F +EE D Y L ++S+ +F Y A G V NY NI ++ R+RQ DHP LV + R +V++ QE +C IC++ +DA+ S C H FC C+ E + A ++ CP +C I LS+ Sbjct: 388 YRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLK-PIQKFGYEGPGKLAFKKVHSLLKHIMLRRTK---LERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQMADHPDLVL-----ASKRKTVDIEN---QEN------------IVCKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCP--SCFIPLSI 657 The following BLAST results are available for this feature:
BLAST of DY305784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305784 ID=DY305784; Name=DY305784; organism=Citrus sinensis; type=EST; length=1244bpback to top |