DY305782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_ARATH (Indole-3-glycerol phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g04400 PE=2 SV=2) HSP 1 Score: 360.918 bits (925), Expect = 8.969e-99 Identity = 181/247 (73.28%), Postives = 207/247 (83.81%), Query Frame = 2 Query: 29 QNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGTHIS 769 + A+++APP RDF+GAL A++RTG P LIAEVKKASPSRGIL+E+FDPVEIA++YEKGGAACLS+LTD+KYF+G FENLEA+RSAGVKCPLLCKEF+VD WQIYYARTKGA+AVLLIAAVL DL+I ++ ICK L L ALVEVHDEREM RV TFEVDISNTKKLLEGE G IR++++IVVGESGLFTPDDIAYVQ AGVKAVLVGESIVKQ+DP KGI GLFG +IS Sbjct: 154 KKAVEDAPPTRDFVGALRMAHKRTGFPGLIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGVKCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLFGRNIS 400
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_MICAN (Indole-3-glycerol phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=trpC PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.445e-64 Identity = 136/242 (56.20%), Postives = 167/242 (69.01%), Query Frame = 2 Query: 29 QNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 Q + APP DF+ AL + PALIAEVKKASPS+G++ EDFDPV IAR+YE+GGA CLS+LTD K+F+GS+ENL VR A V PLLCKEFI+ +QIYYAR+KGA+AVLLIAA+L D D+ Y I K LG+TALVEVH E DRV TF VD+ NT++LLE RGE +R+K I++V ESGL T D+A V++AG AVL+GES+VK DP GI LF Sbjct: 57 QKIANTAPPC-DFLAALKQGKTQ---PALIAEVKKASPSKGVILEDFDPVAIARTYEQGGATCLSVLTDSKFFQGSYENLTLVRQA-VSLPLLCKEFILYPYQIYYARSKGADAVLLIAAILSDQDLAYFVKIVKGLGMTALVEVHSLAEFDRVLAIEGIELIGINNRNLETFTVDLDNTRQLLEA-RGEQVREKGILIVSESGLHTATDLAKVKQAGANAVLIGESLVKLPDPALGIQKLF 292
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_CYAP8 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=trpC PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.598e-63 Identity = 129/247 (52.23%), Postives = 169/247 (68.42%), Query Frame = 2 Query: 17 IIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 ++ + + + PP +DF+GA+ + PALIAEVKKASPS+G++REDFDPV IA++Y KGGA+CLS+LTD K+F+GSFENL VR + V PLLCKEFI+ +QIY ARTKGA+AVLLIAA+L D D+ Y I + LG+TAL+EVH E+DRV TFEVD+ T +LL R + I+ I ++ ESGL TPDD+ +VQ+AG VL+GES+VKQ DP + I LFG Sbjct: 52 LLELRKQVQHLPPPQDFLGAITQGKTQ---PALIAEVKKASPSKGVIREDFDPVAIAQAYVKGGASCLSVLTDAKFFQGSFENLALVRQS-VDLPLLCKEFILYPYQIYLARTKGADAVLLIAAILSDRDLSYFLKIIQTLGMTALIEVHSLTELDRVLAIEGVSLIGINNRNLETFEVDLKTTSQLLAARRDK-IQALGIKIISESGLHTPDDLQFVQQAGSDGVLIGESLVKQPDPTQAIANLFG 293
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_CYAA5 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=trpC PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.953e-61 Identity = 125/237 (52.74%), Postives = 164/237 (69.20%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +APPA+DF+GA+ +Q PALIAEVKKASPS+G++REDF+PV IA++Y +GGA+CLS+LTD K+F+GSF+NL VR A V PLLCKEFI+ +QIY AR KGA+A+LLIAA+L D D++Y+ I LG+T LVEVH E+DRV TFEV + T L+ + E I+++ I +V ESG+ TP + V EAG AVL+GES+VKQDDP + I LF Sbjct: 61 SAPPAKDFLGAI---SQGKTQPALIAEVKKASPSKGVIREDFEPVAIAQAYVQGGASCLSVLTDSKFFQGSFDNLALVRQA-VDIPLLCKEFIIYPYQIYLARVKGADAILLIAAILKDSDLQYLIKIIHGLGMTPLVEVHSLAELDRVLAIEGVSLVGINNRNLETFEVSLETTTNLITARQDE-IKERGIYIVSESGIHTPQHLQQVTEAGANAVLIGESLVKQDDPTQAIANLF 292
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_SYNY3 (Indole-3-glycerol phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=trpC PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 2.551e-61 Identity = 129/247 (52.23%), Postives = 171/247 (69.23%), Query Frame = 2 Query: 17 IIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 ++ Q+ + + P DF+GAL + ++ PALIAEVKKASPS+GI+R DFDPV IA++YE GGA CLS+LTDEK+F+GSFENL+ VRSA V+ PLLCKEFI+ +QIY AR++GA+AVLLIAA+L D D+RY I + LG+ ALVEVH EMDRV TF VD+ T+ L +R E + Q +I +V ESG++ D+ +Q+AG +AVLVGES+VKQ DP + I L+G Sbjct: 52 LVKLQSLVKDMTPPLDFVGALRQSPRQ---PALIAEVKKASPSKGIIRADFDPVAIAKAYEAGGANCLSVLTDEKFFQGSFENLQLVRSA-VQLPLLCKEFIIYPYQIYLARSRGADAVLLIAAILSDKDLRYFLKIIEGLGMAALVEVHTLEEMDRVLALDGVQLIGVNNRNLQTFTVDLQTTEDLF-AQRREQLTQGDITLVSESGIYELADLQRLQQAGARAVLVGESLVKQPDPQQAIAALYG 293
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_SYNSC (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9605) GN=trpC PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 3.227e-56 Identity = 116/234 (49.57%), Postives = 160/234 (68.38%), Query Frame = 2 Query: 50 PPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGL 751 PP +DF+GAL AA + PA+IAEVKKASPS+G++REDFDPV IA++Y GGA+CLS+LTD+ +F+G F+ L VR A V PLLCKEF++ +Q++ AR GA+AVLLIAA+L D D+RY+ LGLT LVEVHD EMDRV +FE D++ T++LL + + ++Q+ +++V ESGLF+ D+ VQ AG AVLVGE++++Q D G+ L Sbjct: 63 PPTKDFLGALQAAATK---PAVIAEVKKASPSKGVIREDFDPVAIAKAYASGGASCLSVLTDKTFFQGGFDVLVEVRQA-VDLPLLCKEFVLSPYQLFQARAAGADAVLLIAAILSDQDLRYLNKAAAALGLTVLVEVHDATEMDRVLSIGGFPLIGINNRDLTSFETDLATTERLLV-DFNDRLKQQGVLLVSESGLFSRADLDRVQAAGAGAVLVGEALMRQQDVEAGLVQL 291
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_CYAP4 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpC PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.226e-55 Identity = 119/235 (50.64%), Postives = 157/235 (66.81%), Query Frame = 2 Query: 17 IIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 721 ++ + + APP RDF+ AL A + PALIAEVKKASPS+G+LRE+FDPV IA++Y GAACLS+LTDEK+F+GSF L +R A V PLLCKEFI+ +Q+Y AR++GA+AVLLIAA+L D D++Y I LG+ AL+EVH E+DRV F VD+ T LL +R + + Q+NI+VV ESGL+ D+ VQ AG KAVL+GES+VK+ Sbjct: 51 LLELRKQVQTAPPPRDFVAALRQAQYQ---PALIAEVKKASPSKGVLREEFDPVAIAQAYATAGAACLSVLTDEKFFQGSFTYLNQIRQA-VHLPLLCKEFIIYPYQMYLARSQGADAVLLIAAILSDQDLQYFLKIATSLGMAALIEVHTLTELDRVLNLEGVSLVGINNRNLENFTVDLQTTCDLL-SKRWDQLDQRNILVVSESGLYQAVDLQQVQTAGAKAVLIGESLVKK 280
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_SYNP6 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpC PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 3.568e-55 Identity = 120/233 (51.50%), Postives = 155/233 (66.52%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 RDF+ AL A R PA+IAEVKKASPS+G+LREDFDPV IA++Y GAAC+S+LTDEK+F+G FENL+ VR+A V PLLCK+F++ +QIY AR GA+AVLLIAA+L D D+RY I LGL ALVEVH E++RV TF D++ T+ L R +++++V ESGLFT D+ V +AG +AVL+GES+VKQ DPG + L G Sbjct: 67 RDFLAALRQAPTR---PAVIAEVKKASPSKGVLREDFDPVAIAQAYAANGAACISVLTDEKFFQGGFENLQRVRAA-VDVPLLCKDFVIYPYQIYKARLLGADAVLLIAAILSDADLRYFLKIAHSLGLNALVEVHSLPELERVLALDDLRLVGINNRNLKTFVTDLAVTEHL-----AAQCRDRDLLLVSESGLFTGADLDRVTQAGAQAVLIGESLVKQPDPGLALQQLVG 290
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_SYNE7 (Indole-3-glycerol phosphate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=trpC PE=3 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 3.568e-55 Identity = 120/233 (51.50%), Postives = 155/233 (66.52%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 RDF+ AL A R PA+IAEVKKASPS+G+LREDFDPV IA++Y GAAC+S+LTDEK+F+G FENL+ VR+A V PLLCK+F++ +QIY AR GA+AVLLIAA+L D D+RY I LGL ALVEVH E++RV TF D++ T+ L R +++++V ESGLFT D+ V +AG +AVL+GES+VKQ DPG + L G Sbjct: 67 RDFLAALRQAPTR---PAVIAEVKKASPSKGVLREDFDPVAIAQAYAANGAACISVLTDEKFFQGGFENLQRVRAA-VDVPLLCKDFVIYPYQIYKARLLGADAVLLIAAILSDADLRYFLKIAHSLGLNALVEVHSLPELERVLALDDLRLVGINNRNLKTFVTDLAVTEHL-----AAQCRDRDLLLVSESGLFTGADLDRVTQAGAQAVLIGESLVKQPDPGLALQQLVG 290
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROM4 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=trpC PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 3.945e-54 Identity = 114/240 (47.50%), Postives = 156/240 (65.00%), Query Frame = 2 Query: 38 LDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 ++N P +DF+GAL Q + PA+IAE+KKASPS+G++RE+FDP+EIA +Y+ GGA CLS+LTD+ +F+G FE L VR V PLLCKEFI+ +QIY AR GA+AVLLIAA+L D D+ Y+ + LGLT LVEVHD E+ RV TF D+ TK++++ E + I ++ +++V ESGLF D+ V G KAVLVGES+++Q D G + L G Sbjct: 59 INNLPQTKDFLGAL---RQSSTSPAVIAEIKKASPSKGVIRENFDPIEIALAYKLGGATCLSVLTDKSFFQGGFEVLVQVRKT-VDLPLLCKEFIIQPYQIYQARVAGADAVLLIAAILSDQDLLYLRKVAISLGLTILVEVHDSNELKRVLDLEGFPLVGINNRDLKTFNTDLRTTKEVVK-EHKKRISEQEVLLVSESGLFNSADLEEVSSYGAKAVLVGESLMRQPDIGLALKNLQG 293 The following BLAST results are available for this feature:
BLAST of DY305782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 399
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305782 ID=DY305782; Name=DY305782; organism=Citrus sinensis; type=EST; length=1262bpback to top |