EY702650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDA17_ARATH (Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.943e-41 Identity = 75/97 (77.32%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R+D ++DKQIQRDDE+++GD DND Sbjct: 60 NDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 156
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDA10_ARATH (Putative histone deacetylase 10 OS=Arabidopsis thaliana GN=HDA10 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.943e-41 Identity = 75/97 (77.32%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R+D ++DKQIQRDDE+++GD DND Sbjct: 44 NDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 140
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDA9_ARATH (Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.726e-41 Identity = 75/97 (77.32%), Postives = 89/97 (91.75%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R D ++DKQIQRDDE+++GD DND Sbjct: 328 NDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDEYFDGDNDND 424
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDAC1_STRPU (Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFD-EDE-QNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+Y +YF P+ L I ++ N N+ YL IK ++ EN+R I HAP VQMQ +P D + D EDE +NPD+R+ QDK+IQRDDEF + + + + Sbjct: 330 NDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPEDAIPDDSDAEDEAENPDKRISIMAQDKRIQRDDEFSDSEDEGE 428
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDA11_DICDI (Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16 Identity = 36/96 (37.50%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDN 311 N+Y++Y+ PE L I ++EN N+K YL +K+Q+LENLR++ HAP+ ++PPD + DED+++PD R+ +DK++ E + D ++ Sbjct: 326 NDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVRISEADRDKKVHHQGELSDSDEED 421
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDAC1_RAT (Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE--FDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+Y +YF P+ L I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D IPE DEDE++PD+R+ + DK+I ++EF + D + + Sbjct: 331 NDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 428
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDAC1_MOUSE (Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE--FDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+Y +YF P+ L I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D IPE DEDE++PD+R+ + DK+I ++EF + D + + Sbjct: 331 NDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 428
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDAC1_BOVIN (Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE--FDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+Y +YF P+ L I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D IPE DEDE++PD+R+ + DK+I ++EF + D + + Sbjct: 331 NDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 428
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDA1B_XENLA (Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-B PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15 Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+Y +YF P+ L I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D + +EDE++PD+R+ + DK+I D+EF + + + + Sbjct: 331 NDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDSVHDDSGEEDEEDPDKRISIRSSDKRIACDEEFSDSEDEGE 428
BLAST of EY702650 vs. ExPASy Swiss-Prot
Match: HDAC1_PONAB (Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.716e-15 Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 24 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE--FDEDEQNPDERMDPHTQDKQIQRDDEFYEGDTDND 314 N+Y +YF P+ L I ++ N N+ YL IK ++ ENLR + HAP VQMQ +P D IPE DEDE +PD+R+ + DK+I ++EF + + + + Sbjct: 331 NDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGE 428 The following BLAST results are available for this feature:
BLAST of EY702650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702650 ID=EY702650; Name=EY702650; organism=Citrus sinensis; type=EST; length=885bpback to top |