DY305777

Overview
NameDY305777
Unique NameDY305777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 7.424e-108
Identity = 189/216 (87.50%), Postives = 203/216 (93.98%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFES 649
            +AACDVPG KRLLPS WRE +FF+NIY+LVG+PVVTVQLRYNGWVTELQD+ERSRQLRQA GLDNLLYTPDADF CFADLAL SPEDYY EGQGSLLQCVLTPGDPYMPLPN+EII RV+K+VLALFPSSQGLEV WSSVVKIGQSL+REGPGKDPFRPDQKTPVKN FLAGSYTKQDYIDSMEGATLSGR+ SA+IC+AGEEL ALRKQLAA +S
Sbjct:  360 IAACDVPGIKRLLPSNWREWEFFDNIYKLVGVPVVTVQLRYNGWVTELQDVERSRQLRQAAGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAALRKQLAAIQS 575          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.073e-106
Identity = 186/229 (81.22%), Postives = 207/229 (90.39%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQMEAPTTDDEL 688
            VAAC VPG KRL+P  WRE++FF NIY+L+G+PVVTVQLRYNGWVTELQDLERSRQ ++A GLDNLLYTPDADF CFADLAL SPEDYY EGQGSLLQCVLTPGDPYMPLPN+EIIRRV+K+VLALFPSSQGLEV WSSVVKIGQSL+REGPGKDPFRPDQKTPV+N FLAGSYTKQDYIDSMEGATLSGR+ SAYIC+AGE+L+ALRK++AA E  E  +  +  DEL
Sbjct:  357 VAACVVPGIKRLVPQKWRELEFFGNIYKLIGVPVVTVQLRYNGWVTELQDLERSRQSKRATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAELNEISKGVSLSDEL 585          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 9.075e-106
Identity = 184/229 (80.35%), Postives = 206/229 (89.96%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQMEAPTTDDEL 688
            VAACDVPG KRL+P  WRE++FF+NIY+LVG+PVVTVQLRYNGWVTELQDLERSRQL++A GLDNLLYTPDADF CFADLAL SP+DYY EGQGSLLQCVLTPGDPYMPL NDEII+RV K+VLALFPSSQGLEV WSSV+KIGQSL+REGPGKDPFRPDQKTPV+N FLAGSYTKQDYIDSMEGATLSGR+ SAYICN GE+L+ALRK++ A E  +  +  +  DEL
Sbjct:  357 VAACDVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLDNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSSQGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAELNDISKGVSLSDEL 585          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 2.092e-102
Identity = 181/230 (78.70%), Postives = 204/230 (88.70%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQMEAPT-TDDEL 688
            VAACDVPG KRL+PS WRE   F+NIY+LVG+PVVTVQLRYNGWVTE+QDLE+SRQLR A+GLDNLLYTPDADF CF+DLAL+SPEDYY EGQGSL+Q VLTPGDPYMPLPND II RV K+VL LFPSSQGLEV+WSSVVKIGQSL+REGPGKDPFRPDQKTPVKN FLAGSYTKQDYIDSMEGATLSGR+ +AYIC+AGE+L ALRK++AA   ++ +   +   DEL
Sbjct:  342 VAACDVPGIKRLIPSEWREWDLFDNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSSQGLEVLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAALRKKIAADHPEQLINKDSNVSDEL 571          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 3.126e-98
Identity = 172/220 (78.18%), Postives = 197/220 (89.55%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFESQEQM 661
            VAACDVPG KRLLPS WRE + F+NIY+L G+PVVTVQLRYNGWVTELQDLE+SRQL++A+GLDNLLYT DADF CF+DLAL+SP DYY EGQGSL+Q VLTPGDPYMPLPN+EII +V K+V+ LFPSS+GLEV WSSVVKIGQSL+RE PG DPFRPDQKTPVKN FL+GSYTKQDYIDSMEGATLSGR+TSAYIC AGEEL+ALRK+L   + ++ +
Sbjct:  342 VAACDVPGIKRLLPSEWREWEMFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVTWSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYICGAGEELLALRKKLLIDDGEKAL 561          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 353.984 bits (907), Expect = 7.700e-97
Identity = 168/213 (78.87%), Postives = 190/213 (89.20%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAA 640
            VAACDVPG KRLLP  WRE +FFN+IYEL G+PVVTVQLRYNGWVTELQD+E +RQL++A+GLDNLLYTPDADF CFADLAL SP DYY EGQG+LLQCVLTPGDPYM +PND+II +VA +V  LFPSS+GLEV WSSVVKI QSL+RE PGKDPFRPDQKTP+KN FLAGSYTKQDYIDSMEGATLSGR+ S+YIC+AGEEL  L K+L++
Sbjct:  334 VAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS 546          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 3.258e-71
Identity = 126/197 (63.96%), Postives = 157/197 (79.70%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYI 592
            V ACD+PG +R+LP  WR+   F+NIY+L  +PV TVQ+R++GWVTELQD  + +QL++A GLDNLLYT DADF CFADLALTSP DYYR+GQGSLLQ VLTPGDP++   N+ I + V K+V  LFPSS+ L + W SVVK+ QSL+RE PG D +RP+QKTP+ N FLAGSYT+QDYIDSMEGAT+SGR+ +  I
Sbjct:  277 VCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVI 473          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 2.335e-69
Identity = 130/198 (65.66%), Postives = 151/198 (76.26%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWR-EMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYI 592
            VAACDVPG K LLP  WR +  FFN IY L  +PV TVQLR++GWVTE+ D  + +QL QA GLDNLLYT DA+F CFADLALTSP DYYR G+GSLLQ VLTPGDP+M   N+ I  RV K+V ALFPS+  L + W SV+K+ QSL+RE PG D FRP Q TP+ N FLAGSYT+QDYIDSMEGATLSGR+ +  I
Sbjct:  277 VAACDVPGIKNLLPENWRTQWDFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMTWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQAI 474          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.288e-24
Identity = 72/210 (34.29%), Postives = 115/210 (54.76%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELV 616
            V A  V  FK LLP  W+E+ +F  + +LVG+PV+ V + ++            R+L+     D+LL++  +    +AD+++T  E YY   Q S+L+ V  P + ++   + EII    KE+  LFP     +     ++   VVK  +S+++  PG +P RP Q++P++  +LAG YTKQ Y+ SMEGA LSG+  +  I    E LV
Sbjct:  377 VFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADMSVTCKE-YYNPNQ-SMLELVFAPAEEWISRSDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLV 570          
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.656e-24
Identity = 72/220 (32.73%), Postives = 115/220 (52.27%), Query Frame = 2
Query:    2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQLAAFE 646
            V A  V   K LLP  WRE+ +F  + +LVG+PV+ V + ++            R+L+     D+LL+T       +AD+++T  E  Y +   S+L+ V  P + ++   + EII R  KE+  LFP     +     ++   VVK  +S+++  P  +P RP Q++P++  +LAG YT Q Y+ SMEGA LSG+  +  I    E LV   K+ +  E
Sbjct:  363 VVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPVINVHIWFD------------RKLKNTY--DHLLFTRSPLLSVYADMSVTCKE--YYDPNRSMLELVFAPAEEWISRSDSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTNQKYLASMEGAVLSGKLCAQSIVQDYELLVRRSKKASTAE 566          
The following BLAST results are available for this feature:
BLAST of DY305777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ZDS_TARER7.424e-10887.50Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN4.073e-10681.22Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC9.075e-10680.35Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_NARPS2.092e-10278.70Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE3.126e-9878.18Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH7.700e-9778.87Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ANASP3.258e-7163.96Zeta-carotene desaturase OS=Anabaena sp. (strain P... [more]
ZDS_SYNY32.335e-6965.66Zeta-carotene desaturase OS=Synechocystis sp. (str... [more]
CRTI_SOLLC2.288e-2434.29Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_NARPS6.656e-2432.73Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BC04RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305777 ID=DY305777; Name=DY305777; organism=Citrus sinensis; type=EST; length=977bp
GGTTGCTGCATGTGATGTCCCTGGATTTAAACGATTACTTCCATCATTGT
GGAGGGAAATGAAATTTTTCAACAATATTTATGAGCTAGTTGGATTGCCT
GTTGTGACAGTGCAGCTTAGATACAATGGTTGGGTTACTGAGTTGCAAGA
CCTAGAACGGTCAAGGCAATTGAGGCAAGCTCTGGGGTTAGATAATCTTT
TGTATACTCCAGATGCTGATTTCCCTTGCTTTGCAGATCTGGCACTCACT
TCACCAGAAGACTACTACAGAGAAGGGCAAGGTTCACTGCTCCAATGTGT
TTTAACACCTGGCGATCCTTACATGCCCTTACCAAATGATGAAATCATAA
GGAGAGTGGCAAAGGAGGTTTTGGCTCTATTTCCATCGTCCCAGGGTTTA
GAAGTTATTTGGTCATCTGTTGTCAAAATCGGGCAGTCTTTGCACCGTGA
GGGACCTGGTAAAGACCCCTTCAGACCTGATCAAAAGACACCAGTGAAGA
ACTTGTTCCTTGCTGGCTCATATACAAAACAGGATTACATAGATAGCATG
GAAGGAGCAACTTTGTCTGGTAGAAAAACCTCAGCATACATATGCAATGC
CGGGGAGGAATTAGTAGCACTGAGGAAGCAGCTTGCTGCCTTTGAATCTC
AAGAACAAATGGAAGCTCCGACTACTGATGATGAACTAAGTGTTGTCTGA
TCACAATCTGTTTGAGGCGTGGCAGCAGGAGTAAGGTTTTTCCACATCTA
AACGCCCTTCACTTTTACACAATATTACATGGATAGTATGGGATGAGGCA
TTTGCTGCCTTAATTTGAATCTCAAGAACAAAGGGAAATCCAGCTTTGAC
TGATGAACTTAGTAAATGATGGGGAGGGTGGGGCTGGGAATAAGGTTTTC
CAATACCCCTGTTATTTCCATGAAAATATCCGTTTTCCTAAATTTCTTAT
TTAAATTTATGGGACAGGGATTCAAAA
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