EY702644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.270e-57 Identity = 106/192 (55.21%), Postives = 135/192 (70.31%), Query Frame = 2 Query: 251 PTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG-KDVSLSELEYIHVHKTAKLLEASXXL 823 P+F F+ YM K +++AL+ A+P+Q P KIHE+MRYSLLAGGKR+RP LC+A+CELVGG++S+ MP ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNH VFGE FEH+A T+ VS+ R+VRA+ QV D++SEG +V L +LE+IH+HKTAKLLE + L Sbjct: 75 PSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVL 266
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPP1_ARATH (Geranylgeranyl pyrophosphate synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=GGPS1 PE=2 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.162e-55 Identity = 114/195 (58.46%), Postives = 134/195 (68.72%), Query Frame = 2 Query: 254 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVG--VSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG---KDVSLSELEYIHVHKTAKLLEASXXL 823 +F F Y+ +K++ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ES MP ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNHKVFGE FEH+A+ T VS RVVRA+ QV D+ SEG DV L LE+IH+HKTA LLEAS L Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVL 267 HSP 2 Score: 21.9422 bits (45), Expect = 1.162e-55 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 859 KKSRNYARCIGLL 897 ++ R +ARCIGLL Sbjct: 280 ERLRKFARCIGLL 292
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 2.575e-55 Identity = 107/191 (56.02%), Postives = 132/191 (69.11%), Query Frame = 2 Query: 254 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG-KDVSLSELEYIHVHKTAKLLEASXXL 823 +F F+ YM K+ V+KAL++A+ ++ P KIHE+MRYSLLAGGKR+RP+LCIA+CEL GG ES+ MP ACA+EM HTMSL+HDDLP +DNDDLRRGKPTNHKVFGE FEH+A T GVS++R+VR + QV D+ SEG DV L LE+IH+HKTA LLE S L Sbjct: 63 SFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVL 253 HSP 2 Score: 22.7126 bits (47), Expect = 2.575e-55 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 862 KSRNYARCIGLL 897 K R +ARCIGLL Sbjct: 267 KLRKFARCIGLL 278
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthetase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.435e-55 Identity = 113/200 (56.50%), Postives = 135/200 (67.50%), Query Frame = 2 Query: 236 VKIALPTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVG-VSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGKD---VSLSELEYIHVHKTAKLLEASXXL 823 +K + +F F Y+ K+ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ESL MP CA+EM HTMSLIHDDLP +DNDDLRRGKPTNHKV+GE FEH+A+ T VS RVVRA+ QV D+ SEG D V L L++IH+HKTA LLEAS L Sbjct: 63 LKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVL 262 HSP 2 Score: 21.9422 bits (45), Expect = 7.435e-55 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 859 KKSRNYARCIGLL 897 ++ R +ARCIGLL Sbjct: 275 ERLRKFARCIGLL 287
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 5.172e-53 Identity = 117/259 (45.17%), Postives = 150/259 (57.92%), Query Frame = 2 Query: 71 SALLKNSPLNY--FKMPFMIPFPNMKPFPMKN-----NACHAENLASVKPSQGAESIMNLKPVKIALPTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGK-DVSLSELEYIHVHKTAKLLEASXXL 823 + L+ N L+Y F IP N K P N + +A+ K + E+ +P F F+ Y+T K+ V+KALDEA+ ++ P IHEAMRYSLLAGGKR+RP+LC+A+CELVGG++ M ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNHK++GE FEH+ T GV+ R+V A+ QV D+ G VSL LE+IHVHKTA LLE+S L Sbjct: 14 ACLVFNQTLSYKSFNGFMKIPLKNSKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEP-------FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVL 265 HSP 2 Score: 23.0978 bits (48), Expect = 5.172e-53 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 859 KKSRNYARCIGLL 897 +K R +ARCIGLL Sbjct: 278 EKLRRFARCIGLL 290
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPP2_ARATH (Geranylgeranyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=GGPP2 PE=2 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 4.684e-51 Identity = 103/193 (53.37%), Postives = 129/193 (66.84%), Query Frame = 2 Query: 254 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGKD---VSLSELEYIHVHKTAKLLEASXXL 823 TF+F+ YM SK++ V+KAL+EA+P+ P KIHEAMRY++LA GKR+RP+LC+ASCELVGG E+ MP ACA+EM HTMSLI DDLP +DNDDLRRGKPT HKV+GE FEH+ T +S++R+V A+ Q D+ SEG D V L LE+IHVHKTA LLE + L Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVL 272 HSP 2 Score: 21.557 bits (44), Expect = 4.684e-51 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 868 RNYARCIGLL 897 R +ARCIGLL Sbjct: 288 RKFARCIGLL 297
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPP4_ARATH (Geranylgeranyl pyrophosphate synthetase 4 OS=Arabidopsis thaliana GN=GGPP4 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.801e-50 Identity = 101/190 (53.16%), Postives = 127/190 (66.84%), Query Frame = 2 Query: 254 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG---KDVSLSELEYIHVHKTAKLLEAS 814 +F F+ YM SK++ +++ALDEA+P+ P IH+AMRY++LAGGKR+RP+LC+A+CELVGG+E L + ACA+EM HTMSLI DDLP +DNDDLRRGKPT HKVFGE FEH+ VS+ ++VRA+ Q DL SEG DV L +LEYIHVHKT LLEAS Sbjct: 78 SFDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT--EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEAS 265
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPP3_ARATH (Geranylgeranyl pyrophosphate synthetase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.510e-47 Identity = 97/193 (50.26%), Postives = 125/193 (64.77%), Query Frame = 2 Query: 257 FQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVG-VSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGKD---VSLSELEYIHVHKTAKLLEASXXL 823 F F+ YM K++ V+ ALD ++P++ P + EA+RYSLLAGGKR+RP+LCIA CELVGGDE+ M ACA+EM HT SLIHDDLP +DN DLRRGKPTNHKV+GE FEH+ + G V+ +R++RA+ Q+ DL SE + V L LE+IH+HKTA LLEA+ L Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVL 256 HSP 2 Score: 24.6386 bits (52), Expect = 6.510e-47 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 859 KKSRNYARCIGLL 897 +K R YARCIGLL Sbjct: 269 EKLRKYARCIGLL 281
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: CRTE_CYAPA (Geranylgeranyl pyrophosphate synthetase homolog OS=Cyanophora paradoxa GN=crtE PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.539e-43 Identity = 89/197 (45.18%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 227 LKPVKIALPTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGK-DVSLSELEYIHVHKTAKLLEAS 814 +KP++ F Y+ + + V+ L++++P +P I++++RYSL AGGKRIRP+LC+ASCEL GG + +P ACALEM HTMSLIHDDLPA+DND RRGKPTNH ++GE FE +A +T V D +V+ I Q+ DL SEGK D +L L +IH+HKT LLEA+ Sbjct: 1 MKPLQT---NFNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAA 194
BLAST of EY702644 vs. ExPASy Swiss-Prot
Match: GGPP6_ARATH (Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 8.099e-41 Identity = 93/211 (44.08%), Postives = 125/211 (59.24%), Query Frame = 2 Query: 224 NLKPVKIALPTFQFEEYMTSKSKKVDKALDEALPM--------QHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKT-VGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSE-----GKDVSLSELEYIHVHKTAKLLEAS 814 N + IA +F YM +K+K ++KALD ++P+ + ++H+AMRY+LL GGKR+RP+LC+ +CELVGG ES MP ACA+EM H SLI DDLP +D+D LRRGKPTNHKVFGE T + A T +GV+++RV+RA+ Q DL E +D L LE +HVHKTA L+EA+ Sbjct: 19 NRRLSSIASSDSEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAA 229 HSP 2 Score: 21.557 bits (44), Expect = 8.099e-41 Identity = 6/13 (46.15%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 859 KKSRNYARCIGLL 897 ++ ++YARC+GL+ Sbjct: 245 ERLKSYARCVGLM 257 The following BLAST results are available for this feature:
BLAST of EY702644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702644 ID=EY702644; Name=EY702644; organism=Citrus sinensis; type=EST; length=899bpback to top |