EY702639

Overview
NameEY702639
Unique NameEY702639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_OLEEU (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Olea europaea PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.691e-35
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S+VAQRLGVYTAKDY D+LEFLVGRW+I+KLTGLSGEGRKAQD+VC LPPRIRRLEERAQ R K+ASA PFSW+FGREI
Sbjct:  303 DNLFENFSSVAQRLGVYTAKDYADILEFLVGRWDIEKLTGLSGEGRKAQDYVCTLPPRIRRLEERAQSRVKKASATPFSWIFGREI 388          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_CARTI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Carthamus tinctorius PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.509e-33
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S VAQRLGVYTAKDY D+LEFLVGRW +  LTGLSGEGRKAQD+VCGLPPRIRRLEERAQGRAK+   VPFSW+F R++
Sbjct:  309 DNLFEHFSAVAQRLGVYTAKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLPPRIRRLEERAQGRAKEGPVVPFSWIFDRQV 394          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_SOLCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum commersonii PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.574e-33
Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    STVAQRLGVYTAKDY D+LEFLVGRW I+KLTGLSGEG KA+D+VCGL PRIR+LEERAQ RAKQ + VPFSWVFG++I
Sbjct:  306 DNLFEHFSTVAQRLGVYTAKDYADILEFLVGRWEIEKLTGLSGEGHKARDYVCGLAPRIRKLEERAQARAKQKAPVPFSWVFGKDI 391          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_RICCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.846e-32
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S VAQRLGVYTAKDY D+LEFLVGRW + KLTGLS EG+KAQD+VC LPPRIRRLEERAQGRAK+A  +PFSW+F R++
Sbjct:  309 DNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVCRLPPRIRRLEERAQGRAKEAPTMPFSWIFDRQV 394          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_SOLTU (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.717e-32
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S VAQRLGVYTAKDY D+LEF VGRW ++KLTGLS EGR+AQD+VCGL PRIR+LEERAQ RAK A +VPFSW+FG+EI
Sbjct:  306 DNLFEHFSAVAQRLGVYTAKDYADILEFHVGRWEVEKLTGLSSEGRRAQDYVCGLAPRIRKLEERAQARAKHAKSVPFSWIFGKEI 391          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_SPIOL (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.280e-32
Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S VAQRLGVYTAKDY D+LEFLVGRW ++KLTGLS EG+KAQD+VC LPPRIRRLEERA+ RAKQA ++PFSW+F R++
Sbjct:  312 DNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWEVEKLTGLSSEGQKAQDYVCSLPPRIRRLEERARERAKQAPSMPFSWIFDRQV 397          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_CUCSA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.409e-31
Identity = 61/86 (70.93%), Postives = 72/86 (83.72%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S VAQRLGVYTAKDY D+LEFLVGRW ++ LTGLSGEG+KAQD+VC LP RIR+LEERAQGRAK+   +PFSW+F R++
Sbjct:  309 DNLFHHFSAVAQRLGVYTAKDYADILEFLVGRWKVESLTGLSGEGQKAQDYVCALPARIRKLEERAQGRAKEGPTIPFSWIFDRQV 394          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_SOYBN (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Glycine max GN=ACPD PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.009e-31
Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGRE 273
            DNL    S+VAQR+GVYTAKDY D+LEFLVGRW +++LTGLSGEGRKAQ+++CGLPPRIRRLEERAQ R K++S + FSW+  RE
Sbjct:  304 DNLFDNYSSVAQRIGVYTAKDYADILEFLVGRWKVEQLTGLSGEGRKAQEYICGLPPRIRRLEERAQARVKESSTLKFSWIHDRE 388          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STAD_HELAN (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.154e-31
Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S VAQRLGVYTAKDY D+LEFLVGRW +  LTGLSGEGRKAQD+VCGL PRIRRLEER   RAK++  VPFSW+F RE+
Sbjct:  309 DNLFENFSAVAQRLGVYTAKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLAPRIRRLEERNSARAKESVNVPFSWIFDREV 394          
BLAST of EY702639 vs. ExPASy Swiss-Prot
Match: STADS_BRANA (Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.726e-29
Identity = 59/86 (68.60%), Postives = 70/86 (81.40%), Query Frame = 1
Query:   19 DNLLAQNSTVAQRLGVYTAKDYFDLLEFLVGRWNIQKLTGLSGEGRKAQDFVCGLPPRIRRLEERAQGRAKQASAVPFSWVFGREI 276
            DNL    S+VAQRLGVYTAKDY D+LEFL GRW I+ LTGLSGEG KAQ+++CGL PRIRRL+ERAQ RAK+   +PFSW+  RE+
Sbjct:  312 DNLFDNFSSVAQRLGVYTAKDYADILEFLAGRWRIESLTGLSGEGNKAQEYLCGLTPRIRRLDERAQARAKKGPKIPFSWIHDREV 397          
The following BLAST results are available for this feature:
BLAST of EY702639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
STAD_OLEEU4.691e-3581.40Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_CARTI1.509e-3376.74Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_SOLCO2.574e-3377.91Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_RICCO2.846e-3274.42Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_SOLTU3.717e-3274.42Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_SPIOL8.280e-3273.26Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_CUCSA2.409e-3170.93Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_SOYBN7.009e-3170.59Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STAD_HELAN9.154e-3173.26Acyl-[acyl-carrier-protein] desaturase, chloroplas... [more]
STADS_BRANA1.726e-2968.60Acyl-[acyl-carrier-protein] desaturase, seed speci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702639 ID=EY702639; Name=EY702639; organism=Citrus sinensis; type=EST; length=525bp
TCAAAAAACAGCGTCCGNGATAACCTATTAGCACAAAACTCGACAGTTGC
CCAGCGGCTCGGAGTCTACACTGCAAAGGACTATTTTGACCTTTTGGAAT
TTCTGGTGGGTAGATGGAACATACAAAAGTTGACGGGTCTTTCGGGAGAG
GGCCGTAAAGCTCAAGATTTTGTTTGTGGTTTGCCTCCAAGAATTAGAAG
GTTGGAGGAGAGAGCTCAGGGAAGGGCCAAGCAAGCATCCGCTGTACCGT
TCAGCTGGGTGTTCGGCAGAGAAATAATTGTTTAGGTGCATGCTGCAAGG
GGAAGAAGGGTGCACAACGACACAAGTCATCATTAAGACACAGTATACTA
TTAGCCAAATAGATGTTTAGTTTCACGTTTACGTATGGCGTACTTAATAA
TAATGGTGATGCTTTTGTAGATACATAATGGTTGGTTTCGTGTTTCTTCT
TTAAGACTTGTTCTGTAATGTGAAGGCTTTTTAATCAGATGTTGAGAATG
TGTAAGCTTTAAAAAAAAAAAAAAA
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