DY305733

Overview
NameDY305733
Unique NameDY305733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1281
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305733 vs. ExPASy Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 3.414e-45
Identity = 94/168 (55.95%), Postives = 117/168 (69.64%), Query Frame = 2
Query:  347 CIPYKFEKNDENKN---CKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAIQSCRYDWMIDALKKFLLGMNTERTQLCKSADSEDSTAKEHQ 841
            CIPY+  K DE +         K+ VLM+S+PNR DLVFPKGGWEDDETV EAA REA+EEAGV+G+L E PLG WEFRSKS     +   GGC+GYMFAL+VTEELE WPE+ N +R WL+V+EA++ CRY+WM  AL++FL  M  ER    +     DS+  E +
Sbjct:   25 CIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHDLVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSSTVE-DECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRALEEFLRVMEDERRLRTEEETVHDSSKLEEE 191          
BLAST of DY305733 vs. ExPASy Swiss-Prot
Match: NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.213e-44
Identity = 94/164 (57.32%), Postives = 117/164 (71.34%), Query Frame = 2
Query:  347 CIPYKFEKNDENKNCKM--EKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCN-SKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAIQSCRYDWMIDALKKFLLGMNTERTQLCKSADSEDSTA 829
            CIPY+  K++E  +  +  E K+ VLMIS+PNR DLVFPKGGWEDDETV EAA REA+EEAGV+G+L E+PLG WEFRSKS     +    GGC+GYMFALEV EEL  WPEQ + +R WL+V+EA++ CRY+WM  AL++FL  M  E       +  EDS A
Sbjct:   25 CIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEFLRVMAEE------GSTKEDSLA 182          
BLAST of DY305733 vs. ExPASy Swiss-Prot
Match: NUD16_ARATH (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.758e-33
Identity = 72/136 (52.94%), Postives = 98/136 (72.06%), Query Frame = 2
Query:  347 CIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAIQSCRYDWMIDAL 754
            CIP+++  +D++ N +  K + VLMIS+ +   L+FPKGGWE+DETV EAA REA+EEAGVRG+L +  LG +EF+SKS  +   S EG C+  M+AL V EEL +WPE     R WL++EEA++SCR+ WM DAL
Sbjct:   25 CIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLFPKGGWENDETVREAAAREAVEEAGVRGILMDF-LGNYEFKSKSHQDEF-SPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDAL 158          
BLAST of DY305733 vs. ExPASy Swiss-Prot
Match: NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.033e-25
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  347 CIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAIQSCRYDWMIDAL 754
            C+PY+F+ +++ K   +  +V VL+IS+     L+FPKGGWE DE+V EAA RE LEEAGV G + E+ LG+W+F SKSR            G MF + VTE+LE WPEQ   +RIW++V EA ++CR  WM +AL
Sbjct:   30 CVPYRFKLSNDGK---ISDEVEVLVISSQKGHALMFPKGGWELDESVEEAASRECLEEAGVLGNV-EHQLGKWDFLSKSRGTY-------YEGLMFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEAL 154          
BLAST of DY305733 vs. ExPASy Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.491e-24
Identity = 60/141 (42.55%), Postives = 92/141 (65.25%), Query Frame = 2
Query:  347 CIPYKFEKNDENKNCKMEKKVL-VLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAIQSCRYDWMIDALKKFL 766
            C+PY+++K + N    +E +V+ VL++S      ++FPKGGWE DE++ EAA RE +EEAGV G L+E  LG+W+++SK      +       GYMFAL V++E E WPE    +R W+S++EA + C+  WM +AL+ F+
Sbjct:   65 CVPYRYKKQEVNG---VETQVIQVLLVSAQKGKGMLFPKGGWETDESMEEAALRETIEEAGVTGELEEK-LGKWQYKSKRHSIIHD-------GYMFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNWWMREALEAFI 194          
BLAST of DY305733 vs. ExPASy Swiss-Prot
Match: NUD18_ARATH (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.154e-23
Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 2
Query:  347 CIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAIQSCRYDWMIDAL 754
            CIPY+ + + +     +  +  VL+IS+     L+FPKGGWE DE+V EAA RE+LEEAGV G + E  LG+W+F SK       SK     G+MF + V EELE WPEQ   +RIW+ V+EA  +CR  WM +AL
Sbjct:   25 CIPYRLKISSDGT---ISDEFEVLVISSQKGHALMFPKGGWELDESVEEAASRESLEEAGVVGNV-ERQLGKWDFLSK-------SKGTFYEGFMFPMLVKEELELWPEQHLRQRIWMKVDEARDACRDWWMKEAL 149          
BLAST of DY305733 vs. ExPASy Swiss-Prot
Match: NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.048e-22
Identity = 55/141 (39.01%), Postives = 88/141 (62.41%), Query Frame = 2
Query:  347 CIPYKFEKNDENKNCKMEKKVLVLMISTPNRDD-LVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAIQSCRYDWMIDALKKFL 766
            C+PY+++K+   +       + VL+IS   +   ++ PKGGWE DE++ EAA RE +EEAGV G L+E+ LG+W+++SK      +       G+MF L V+++ E WPE    +R W+S+ EAI+ C+  WM +AL+ F+
Sbjct:   66 CVPYRYKKHGGGE-------IEVLLISAQKKGKGMLLPKGGWEIDESIEEAALRETIEEAGVTGQLEES-LGKWQYKSKRHTMIHD-------GHMFPLLVSQQFEIWPESEFRQRKWVSLSEAIELCQNSWMREALEAFI 191          
The following BLAST results are available for this feature:
BLAST of DY305733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
NUD12_ARATH3.414e-4555.95Nudix hydrolase 12, mitochondrial OS=Arabidopsis t... [more]
NUD13_ARATH2.213e-4457.32Nudix hydrolase 13, mitochondrial OS=Arabidopsis t... [more]
NUD16_ARATH1.758e-3352.94Nudix hydrolase 16, mitochondrial OS=Arabidopsis t... [more]
NUD17_ARATH1.033e-2548.53Nudix hydrolase 17, mitochondrial OS=Arabidopsis t... [more]
NUDT4_ARATH1.491e-2442.55Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4... [more]
NUD18_ARATH2.154e-2347.06Nudix hydrolase 18, mitochondrial OS=Arabidopsis t... [more]
NUD21_ARATH9.048e-2239.01Nudix hydrolase 21, chloroplastic OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM2AE06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305733 ID=DY305733; Name=DY305733; organism=Citrus sinensis; type=EST; length=1281bp
GGTTGTTTTGATTATTACTTTGTTTCATTTTATTTTCAAGCCTAGCTTAT
TTTTTCTTTTGCTTGCTCAATTAAGTTTTTTGTATTTTTATATAACTTAC
TCTTCCTTTTTTATGCATTGACTCTTCATTCCTCCAACTTTTAGTTAAAT
GGTGTTTTATTTCCTCATTCTCTATATTGTATTTAGGGGTGTGTATATCT
AAGTATATAGAATGCAGCCCTGAAATTGACTTTATTTATGTCAAAACTAA
TTTTTACATTAATCATTAAATCTGGAACTTAGTTTTCTTAGTTGTTATTA
ATTCAGTTGCTTTTCAATTTCCATTCAAACAAATTAACAATATAGGTGTA
TTCCCTACAAGTTTGAGAAGAACGATGAAAATAAAAATTGCAAGATGGAA
AAAAAGGTTCTTGTACTCATGATTTCCACACCTAATCGCGATGATCTTGT
GTTTCCAAAGGGTGGATGGGAGGACGATGAGACTGTAAGTGAAGCTGCAT
GTCGAGAAGCCTTGGAGGAAGCAGGAGTCAGAGGATTACTTGATGAAAAT
CCATTGGGAGAATGGGAATTTAGAAGCAAGAGCAGAATGAATAGTTGCAA
CAGCAAGGAAGGAGGTTGTAGAGGTTATATGTTTGCATTGGAAGTCACTG
AAGAGCTTGAGTCATGGCCAGAGCAAGCTAACTATAAGAGGATATGGCTT
TCTGTGGAGGAAGCNATTCAATCTTGTCGGTATGATTGGATGATAGATGC
TCTTAAAAAGTTTCTGCTGGGTATGAACACAGAAAGAACACAATTGTGTA
AATCTGCAGATTCAGAGGACAGTACCGCAAAAGAACATCAAATGTATTCT
CCCAGTCCAGGCTGTTCTGTGAAGAAGCAATCTGGTGTACATCATCAACT
TGAAAAATCTTGCACCATGGACTGTGGTTGTACAGGTTAATTTTTATAAG
GGATCCAAATAGATTCACAGGGTAAAAAAAAAAAAAAAAAAACCCAAGGG
GGGGGCCCGGACCCCCATTCCCCCCAAAAAGGGAACCGTAATAAAAAATC
CCTTGGCGCGGCCAGTTATATCCAGCCCCGGGAAGGGGAAAAAACCCCTG
GGGGGTATCCCCAATTTAATCTCCCCCTTTGCCCCCCCTCCCCCCCTTTT
TCCCCAGCGCGGGGGGAAAAAAAACCAGAAAAAAGGCCCCCCCACCCCCA
AATTTCCCCCCTCTTCCCCCCCACAAATTGTTGCCCCCCCCCCCCCCGCG
AGAGAAGGGGGGGGAAAAAAAAGGGGAGAGA
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