DY305702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB2_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1 SV=2) HSP 1 Score: 384.03 bits (985), Expect = 9.539e-106 Identity = 183/243 (75.31%), Postives = 201/243 (82.72%), Query Frame = 2 Query: 56 LLTARLHASEAEAQKVEPKASANTETKKFQIYRWNPDSPSKPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 L+ AR ++ +EAQ K FQIYRWNPD+P KPEL+++KI+LK+CGPMVLDALIKIK+E+DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP +PGKEI QSKKDRAKLDGMYECILCACCSTSCPSYWW E+Y GPAALLHANR IS+ R+ YTKERLE ID+EF L RC TILN A PKG N Sbjct: 23 LIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLN 265
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB1_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1 SV=2) HSP 1 Score: 376.711 bits (966), Expect = 1.523e-103 Identity = 182/244 (74.59%), Postives = 201/244 (82.38%), Query Frame = 2 Query: 56 LLTARLHASEAEAQ-KVEPKASANTETKKFQIYRWNPDSPSKPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 L+ AR ++ AEA+ K + K FQIYRWNPD+P KPEL+ ++I+LK+CGPMVLDALIKIK+E+DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI S +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK P +P KEI QSKKDRAKLDGMYECILCACCSTSCPSYWW E+Y GPAALLHANR IS+ R+ YTKERLE ID+EF L RC TILN A PKG N Sbjct: 23 LIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLN 266
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB_UROFA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Uromyces fabae GN=SDH2 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 2.707e-76 Identity = 145/238 (60.92%), Postives = 172/238 (72.27%), Query Frame = 2 Query: 77 ASEAEAQKVEPKASANTETKKFQIYRWNPDSPSK-PELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 A+ AE + +SA K+F IYRWNPD PSK P L+ + I+LK+CGPMVLDALIKIK+E+DP+LTFRRSCREGICGSCAMNIDG N LACL +I+ SA I PLPHM++IKDLV DMT+FY QYKSIEP+LK NPP E QS +DR KLDGMYECILCACCSTSCPSYWW + Y GPA L+ A R +++ R+ Y ++R E + L RC TI N T PKG N Sbjct: 34 ATPAEEHAGKQPSSA-VPVKEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFYKQYKSIEPFLKNDNPPAQG--EFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRWMADSRDSYGEDRKEKLQNTLSLYRCHTIFNCTKTCPKGLN 268
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB3_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana GN=SDH2-3 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 2.292e-75 Identity = 147/237 (62.03%), Postives = 172/237 (72.57%), Query Frame = 2 Query: 83 EAEAQKVEPKASANTETKKFQIYRWNPDSP-SKPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTI-TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDE-EFYL*RCPTILNFAPTRPKG*N 784 E E Q E K K+F+IYRWNPD P SKP L+ F ++L CGPMVLD L KIK+E D SL++RRSCREGICGSC+MNIDG N +ACL I+P+ S TI TPLPHM+VIKDLVVD+TNFY QYKS+EPWLK + PP G+E QS KDR KLDG+YECILCACC+TSCPSYWW E + GPAALL A R IS+ R+ Y +ERL+ I E E + RC I N T PKG N Sbjct: 57 EKEGQHKEVK-------KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPK-DGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLN 285
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB_DROME (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster GN=SdhB PE=2 SV=2) HSP 1 Score: 281.952 bits (720), Expect = 5.105e-75 Identity = 137/237 (57.81%), Postives = 177/237 (74.68%), Query Frame = 2 Query: 95 QKVEPKASANTETKKFQIYRWNPDSPS-KPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP-PMPGK-EIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*NHER 793 Q+ +PK + + KKF+IYRWNPD+ KP ++ ++++L+ECGPMVLDALIKIK+E+DP+LTFRRSCREGICGSCAMNI G N LAC++KI + S S + PLPHM+V++DLV DM NFY QY++I+PWL+RKN GK + QS +DR+KLDG+YECILCACCSTSCPSYWW +E Y GPA L+ A R I + R+ + ERL + + F + RC TI+N T PKG N R Sbjct: 34 QQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGR 270
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB_MYCGR (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mycosphaerella graminicola GN=SDH2 PE=3 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 8.708e-75 Identity = 137/229 (59.83%), Postives = 169/229 (73.80%), Query Frame = 2 Query: 104 EPKASANTETKKFQIYRWNPDSPS-KPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 EP+ A+ +TK F IYRWNPD P+ KP ++ + ++L + GPM+LDALI+IK+E+DP+LTFRRSCREGICGSCAMNIDG N LACL +I + T I PLPH +V+KDLV DMT FY QYKSI+P+L+R PP GKE QS DR KLDG+YECILCACCSTSCPSYWW SE Y GPA LL + R I++ R+ T +R + ++ L RC TILN + T PKG N Sbjct: 54 EPQMDADAKTKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQRDTAPP-DGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYRWINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLN 281
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB_CHICK (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallus gallus GN=SDHB PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 8.708e-75 Identity = 137/240 (57.08%), Postives = 173/240 (72.08%), Query Frame = 2 Query: 71 LHASEAEAQKVEPKASANTETKKFQIYRWNPDSPS-KPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 L A + + A+A + KKF IYRW+PD P KP ++ ++++L +CGPMVLDALIKIK+E+D +LTFRRSCREGICGSCAMNI G N LAC KI P S +T I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + Y GPA L+ A R + + R+ YT+ERL + + F L RC TI+N T PKG N Sbjct: 29 LEAVHGICRGAQTAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLN 268
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB_XENLA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus laevis GN=sdhb PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 1.137e-74 Identity = 136/244 (55.74%), Postives = 173/244 (70.90%), Query Frame = 2 Query: 59 LTARLHASEAEAQKVEPKASANTETKKFQIYRWNPDSPS-KPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 L+ L S P + A KKF IYRW+PD P KP ++ ++++L CGPMVLDALIKIK+E+DP+LTFRRSCREGICGSCAMNI+G N LAC +I + S S I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW ++ Y GPA L+ A R + + R+ +T+ERL + + F L RC TI+N T PKG N Sbjct: 17 LSGALQVSRGAQTAAAPASQAAARIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDKSQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTRTCPKGLN 260
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB_SCHPO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Schizosaccharomyces pombe GN=sdh2 PE=2 SV=2) HSP 1 Score: 278.87 bits (712), Expect = 4.322e-74 Identity = 137/238 (57.56%), Postives = 167/238 (70.17%), Query Frame = 2 Query: 77 ASEAEAQKVEPKASANTET-KKFQIYRWNPDSPS-KPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 A+EA + E K F+IYRWNP+ P KP+L+++ ++L +CGPMVLDALIKIK+E DP+LTFRRSCREGICGSCAMNI+G N LAC+ I + I PLPH F++KDLV D+T FY QYKSIEPWL+ N P KE QS+ DRAKLDG+YECILCACCSTSCPSYWW SE Y GPA L+ A R I + R+ T +RL+ + + RC TI+N A T PKG N Sbjct: 2 ATEANISATSANPQSQGENLKTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIKKDNKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWLQNDNIP--KDKEFYQSRADRAKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWIIDSRDQATAKRLDVMQNSMSVYRCHTIMNCARTCPKGLN 237
BLAST of DY305702 vs. ExPASy Swiss-Prot
Match: DHSB_XENTR (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus tropicalis GN=sdhb PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 7.372e-74 Identity = 135/233 (57.94%), Postives = 170/233 (72.96%), Query Frame = 2 Query: 92 AQKVEPKASANTETKKFQIYRWNPDSPS-KPELKEFKINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYYGPAALLHANRCISECRE*YTKERLETIDEEFYL*RCPTILNFAPTRPKG*N 784 A P + A KKF IYRW+PD P KP ++ ++++L ECG MVLDALIKIK+E+DP+LTFRRSCREGICGSCAMNI+G N LAC +I + S S I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW ++ Y GPA L+ A R + + R+ YT+ERL + + F L RC TI+N T PKG N Sbjct: 30 AAAAAPASQAEARIKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDYTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLN 262 The following BLAST results are available for this feature:
BLAST of DY305702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305702 ID=DY305702; Name=DY305702; organism=Citrus sinensis; type=EST; length=1224bpback to top |