DY305691

Overview
NameDY305691
Unique NameDY305691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1261
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305691 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 3 
Query:   66 NSSDRRRAIEELIKGQEMALQLRNLIHKSTKSGEGSKAMIINQDLVANILSSFTNSLSILKNGD--SDEASQVQEHTQLSSPCWEAYLKTEDSGESSKS-STVKDRRGCYKTRKCAESWTEHSSTLTDDGHAWRKYGQKVILNAIFPR 500
            N + + + + +L++G ++  QL+ L+   ++ G G       +DLVA IL  F N++S+L   +  S  +S        ++ C +   K EDSG+S K    VK +RGCYK +K +E+ T  S T+ +D  +WRKYGQK ILNA FPR
Sbjct:    4 NKAKKLKVMNQLVEGHDLTTQLQQLL---SQPGSGL------EDLVAKILVCFNNTISVLDTFEPISSSSSLAAVEGSQNASC-DNDGKFEDSGDSRKRLGPVKGKRGCYKRKKRSETCTIES-TILEDAFSWRKYGQKEILNAKFPR 140
The following BLAST results are available for this feature:
BLAST of DY305691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK70_ARATH3.598e-1537.16Probable WRKY transcription factor 70 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1DG08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305691 ID=DY305691; Name=DY305691; organism=Citrus sinensis; type=EST; length=1261bp
GGGGGAAAAAAATCATAATGAAAATGGAGGCCGGTCAGGCCACATCTTCA
TCTTCTTGGCTAGAGAATTCATCAGATCGAAGAAGGGCCATAGAAGAGCT
TATCAAAGGCCAAGAAATGGCACTCCAGCTTCGAAATCTCATTCACAAGT
CCACAAAAAGTGGAGAAGGGTCAAAAGCGATGATCATCAACCAAGATCTC
GTGGCAAATATACTGAGCTCATTTACAAACTCTCTTTCAATATTGAAAAA
TGGTGACTCTGATGAAGCGTCCCAAGTTCAAGAACATACCCAATTGAGCT
CTCCTTGCTGGGAGGCTTATTTGAAGACGGAGGATTCAGGTGAAAGCAGC
AAGAGCTCAACCGTTAAAGACCGGAGAGGATGCTACAAGACAAGAAAGTG
TGCGGAATCATGGACAGAACATAGCTCTACTCTGACAGATGATGGCCATG
CATGGAGGAAATATGGGCAAAAAGTGATTCTCAATGCCATATTTCCAAGG
TATAACAATTTTCAATAATGAAAGCTCACAAATTACGATAACTTAATAGT
ATGTTCATTATATTAACTTTATAACATACACCCTCATGAGAGTTAAATAA
CCTAAATTGGTGTTGATTTTCTTGGGCGAAAGAATGACTCCATGACACGA
GAACTATAAATAAGGTTGACAAAGCAATATATACGGAACAAAGGATTAGC
AGAGATCTCTATAGTCTGAAGATATATGAGGCCGGCTGTCAACCAGCGAC
CAAAGAGGGCGACACACTGAGCCGAAAATCGATATGAACGCAAGAAAAGA
AAGTAGAACCGGATTGGACCCCCCATGCGAACTTAAATTATTTTGCTATT
TAACACCGTACGCCCGTAAGAGTGGGAATTGACATCCGAGAAAGGGGTCA
GCTAAAGCAAATGGCAGAACGCAGGAGCAAAAGGGACGCGATGAAATGGA
TGAGAAGAGAAGAGCGAGAAGTGAGACAACGCTATACCGGGGCAAGTATG
TTGACGTGGGTGCGCGTCCGGCAGTAGCTCTACATCTCAGAAACACGCGG
CCCTGACAAAATGAAACATAACGAACGCTAAGAAACAAAAAAATAGCGAT
AACACGAAGGAAAAAAGCCGAACTTGCCTAGACAGGCAGTGACACGCTTA
GAAGCCAACCCAAGAAAGGAGGATACAACCTGAAGAAAAAGAAAGCAAAC
GTAAAACAAGAAAAGAAGGAAAGATGCGAAAGAAGAACGTGGACACTGGG
GGCGCCTAGGA
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