DY305668

Overview
NameDY305668
Unique NameDY305668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1269
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.184e-44
Identity = 99/162 (61.11%), Postives = 116/162 (71.60%), Query Frame = 3
Query:  498 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*L-SPSPCLFNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQK 980
            MALP SAIGFEGYEKRLE+SFFE   FADP G+GLR+L+K Q+DEIL+PAECTIV SLSN++LDSYVLSESSLFVYPYK+I +TCGTTKLLLS PAI     S S  + N+  T          +  HR+FSEE+  LD  F  LG ++  F  G   QPQK
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFPGAQSFPHRSFSEEVELLDNYFGKLGLESNAFIMGNPDQPQK 162          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.015e-41
Identity = 103/201 (51.24%), Postives = 127/201 (63.18%), Query Frame = 3
Query:  498 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSP-SPCLFNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQKKGMFYLPLLEAETLVTQFYT*KCS*LVLKEKGPLLFNKT 1097
            MAL  SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLSESSLFVYPYK+I +TCGTTKLLLS P I       S  + ++  T    +        HR FSEE+  LDG F  LG  +  +  G + + Q+  ++      AE      YT +     L +K   +F KT
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEVQPYPHRNFSEEVAILDGYFGKLGTGSKAYVMGGAGKQQQWHVYSASAESAEN-TFPIYTLEMCMTGLDKKSASVFFKT 200          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.465e-40
Identity = 95/162 (58.64%), Postives = 111/162 (68.52%), Query Frame = 3
Query:  498 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSP-SPCLFNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQK 980
            MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSESSLFVY YK+I +TCGTTKLLL+ P I       S  + ++  T          +  HR FSEE+  LDG F  L   +     G   + QK
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQK 164          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.567e-40
Identity = 94/161 (58.39%), Postives = 110/161 (68.32%), Query Frame = 3
Query:  501 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSP-SPCLFNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQK 980
            ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSESSLFVY YK+I +TCGTTKLLL+ P I       S  + ++  T          +  HR FSEE+  LDG F  L   +     G   + QK
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQK 164          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 9.496e-40
Identity = 100/201 (49.75%), Postives = 124/201 (61.69%), Query Frame = 3
Query:  498 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSP-SPCLFNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQKKGMFYLPLLEAETLVTQFYT*KCS*LVLKEKGPLLFNKT 1097
            MAL  SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLSESSLFVYPYK+I +TCGTTKLLLS P I       S  + ++  T    +        HR FSEE+  LD  F  L   +  +  G + + Q+  ++      AE      YT +     L +K   +F KT
Sbjct:    1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEVQPYPHRNFSEEVAILDSYFGKLSTGSKAYVMGGAGKQQQWHVYSASAESAEN-TFPIYTLEMCMTGLDKKSASVFFKT 200          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.240e-39
Identity = 96/198 (48.48%), Postives = 122/198 (61.62%), Query Frame = 3
Query:  498 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSPSPCLFNL*NTSWKLHICLGL-TISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQKKGMFYLPLLEAETLVTQFYT*KCS*LVLKEKGPLLF 1088
            M+  VSAIGFEG+EKRLE+SFFEP  FADP G+GLR LSK+QLDE L PAECTIV+SLSNEH+DSYVLSESSLFVY YK+I +TCGTTKLL S P I                +    I  G  +  HR+FSEE++ LD  F  LG+ +  +  G S + QK  ++        TL   +    C   + ++K  + +
Sbjct:    1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCGTTKLLKSIPPILKLADSLSLTVRSVRYTRGCFIFPGAQSYPHRSFSEEVSVLDNYFGKLGSGSKAYIMGGSDKQQKWHVYSACAASTRTLDPVYTMEMCMTSLNRDKASVFY 198          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.763e-39
Identity = 92/161 (57.14%), Postives = 112/161 (69.57%), Query Frame = 3
Query:  504 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSPSPCL--FNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQK 980
            + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK QLDEIL PAECTIV SL+NE +DSYVLSESSLFVY YK+I +TCGTTKLL S   I + L+   CL   ++  T          +  HR+FSEE+  LD  F NLG  +  F  G   +PQK
Sbjct:   25 MALSAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTTKLLHSILPILT-LADGLCLDVKSVRYTRGSFIFPGAQSYPHRSFSEEVAVLDKYFGNLGTGSKAFVMGSPAKPQK 184          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.713e-39
Identity = 92/163 (56.44%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  495 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSP-SPCLFNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQK 980
            +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLSK QLDEIL PAECTIV +LSN+++DSYVLSESSLFVY YK+I +TCGTTKLLL+ P I       S  + ++  T          +  HR FSEE+  LDG F  L   +     G   + QK
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKTQK 164          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 8.039e-39
Identity = 92/159 (57.86%), Postives = 112/159 (70.44%), Query Frame = 3
Query:  504 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*L-SPSPCLFNL*NTSWKLHICLGLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQ 977
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSESSLFVY YK+I +TCGTTKLLLS P I     S S  + ++  T          +  HR FSEE+  LDG F  LG+ +  +  G S + Q
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIPPILKLADSISLNVRSVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGFFGKLGSGSMAYILGGSDEAQ 159          
BLAST of DY305668 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 8.039e-39
Identity = 90/180 (50.00%), Postives = 113/180 (62.78%), Query Frame = 3
Query:  504 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVINQTCGTTKLLLSFPAIPS*LSPSPCLFNL*NTSWKLHICL-GLTISHRTFSEEITGLDGTFCNLGNDNTTFCHGKS*QPQKKGMFYLPLLEAETLVTQFYT 1040
            + +SAIGFEGYEKRLEV+FFEP +F D  G GLR+L+K QLDEIL PA CTIVSSLSN+ LDSYVLSESS FVYPYKVI +TCGTTKLLLS P +                +    +C  G    HR+FSEE++ LDG F  LG ++  +  G   + +K  ++     ++       YT
Sbjct:    1 MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNVYT 180          
The following BLAST results are available for this feature:
BLAST of DY305668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
DCAM_CATRO2.184e-4461.11S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_IPONI1.015e-4151.24S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_NICSY1.465e-4058.64S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_TOBAC5.567e-4058.39S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_IPOBA9.496e-4049.75S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DAUCA1.240e-3948.48S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM1_DIACA2.763e-3957.14S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_SOLTU4.713e-3956.44S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_PEA8.039e-3957.86S-adenosylmethionine decarboxylase proenzyme OS=Pi... [more]
DCAM1_ARATH8.039e-3950.00S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DD11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305668 ID=DY305668; Name=DY305668; organism=Citrus sinensis; type=EST; length=1269bp
GAGGAGATCGAAATTCGTTTTGTGAAACAGAGTGAAAAATCAACCCTTCT
TTAATCCTCAAGGAATTTTATTATTTTCTTGGTCTCTGAATCGAGGGTTT
TGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATATTATCTGAGCAAGGCT
GAATGATCTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGCAGTAGTT
CCTTATTCTACGAAGCTCCTCTTGGTTACAGCATTGAAGACGTTCGACCT
CACGGTGGCATAAAGAAGTTCAGATCAGCTGCATACTCAAACTGCGTCCG
CAAACCATCCTGAGATCGTCCAATTTGTCCCATACCCCCCCAAAAAAAAG
CTCACTACTACTGCAATTTTAATTTTTTTTAGTTTTAGCCGTCTTAATAC
TGCAATTTACTTGGCCTATTTCTTTTTCGACTTCCCTCGTTCTCTCGTTC
TGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTTTCTGTAAGGCAAGATG
GCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTTATGAAAAGAGGCTTGA
AGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTGATCCTGGAGGTAGGGGCC
TCCGCTCTCTGTCAAAACATCAATTGGATGAAATACTGAAACCTGCGGAA
TGCACAATTGTTTCTTCCTTGTCAAATGAACATCTTGATTCATATGTCCT
CTCAGAATCAAGCCTCTTTGTGTACCCTTACAAAGTTATTAATCAAACTT
GTGGGACTACCAAGCTGCTTCTTTCATTCCCTGCCATCCCCAGTTAGCTG
AGTCCCTCTCCTTGTCTGTTCAATCTGTGAAATACCTCGTGGAAGCTTCA
TATTTGCTTGGGCTTAACCATTTCCCACCGTACCTTCTCTGAGGAAATAA
CTGGTCTTGATGGAACCTTTTGCAATTTGGGTAATGACAACACAACTTTT
TGTCATGGGAAGTCCTGACAACCACAAAAAAAGGGCATGTTTTACCTGCC
CCTGCTGGAAGCAGAAACCCTGGTAACCCAATTTTACACCTAAAAATGTT
CTTGATTGGTTTTGAAAGAAAAAGGGCCCCTGCTTTTCAACAAAACAATT
GAAACGCCACCCCCTCTAATATAAACGAAAGAACTCTGGCTCTCAAAAAA
ATTTCTTCCAAAATTCCGAAAATTTTTTAAATTTTAATAGTTAAATCCCT
TGGGGGTTTTACCTTCTATAAAAAAATAAATTTATGTGGAGGGGAGGAGG
GACCAAATTAATCTACTTA
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