DY305655

Overview
NameDY305655
Unique NameDY305655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1230
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305655 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.291e-17
Identity = 63/175 (36.00%), Postives = 94/175 (53.71%), Query Frame = -1 
Query:  307 PVHFTFGPGASNSFQFTPLSSISGGS---SFYGLEMIGISVGGQKLSIAASVFT-----TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDF-SKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSDPTDVSIFGNTQQHTLEVVYD 804
            P     G  AS   + +P +++   S   ++Y + + GI+VGG  L I +S F      T G IIDSGT +T LP DAY  +  AF   ++      + S L TC+   S  STV +P+IS+ F GGV +++ +  I+ +     +CLA  G+S    +SIFGN QQ   +V+YD
Sbjct:  250 PSTLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGV-LNLGEQNILISPAEGVICLAM-GSSSQLGISIFGNIQQQETQVLYD 422
The following BLAST results are available for this feature:
BLAST of DY305655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NEP2_NEPGR1.291e-1736.00Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1DC02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305655 ID=DY305655; Name=DY305655; organism=Citrus sinensis; type=EST; length=1230bp
ATATAAACAATTGATTCAAAGTCATCATTGCTTGTGACAAACGAGATCTT
ATACAATCACAGGCCTATGGCCATACATACAATTATTTGATTGGATTGAA
TACTATTCATCTACATCTTGCAGCAGCAGTAAATTTAACTCCCATTTTTG
ATACAGACACTAATTATCATTTCCCTTTTTGTCTCCCATAGAAGTTCTTA
ATCTTCCAATATTATTCTTAAATGCTTGCATTAAGCTCGCTCACCTAATT
AAATAGACTAGCTAGCTGCAGCCACCAGCAGCAAACCCAACTTTCCCTCC
GGCAACATCATAAACAACCTCCAAGGTATGTTGCTGCGTATTTCCGAAAA
TGCTCACATCTGTCGGATCACTATTCCCCGCAAACGCCAAACAAACCTGA
GATATATTACTCGCGTACATAATCCCTGTCTTATCAACACTCACCTCCAC
ACCTCCACTGAAGAACAAGCTTATCTGAGGGAGAGTGACAGTACTATACT
TACTAAAATCATAACATGTGTCAAGAAGCGACAGCGCGGGCGCAGTCGGA
TACTTGGACATAAACTGACGGAATGCTGTCCGCAGAGGGGTGTATGCATC
CGGAGGCAGACGTGTGATGACAGTTCCGGAGTCTATAATTGTACCGGCTG
TAGTGAAAACTGACGCGGCAATGGATAGTTTTTGGCCGCCAACGCTGATT
CCAATCATTTCAAGGCCGTAAAATGATGATCCTCCAGAAATTGAGGAGAG
TGGGGTGAACTGAAAGGAATTTGATGCGCCGGGGCCGAAAGTGAAGTGAA
CCGGTTGACCTGGCCGACAAAAGGAGGCAAAAGAAAAAAAGTTTCCTGTA
TTTTGTGGCTGTTTGGAAAACTAATGAAAATGGGTCCGGGCCCAAAACCC
TTAAACGGGCACCCCCCCCAAAAACCCCCCGTTGTTTTGGCCCGAACCCA
AAAAGAAATTAAGGAAAAACTCCCCTGGGGTCAAGGGGGGGGGGGCCGGG
AACCAACTTCCCCCTAAAAAAGCTCGAATAAAATATCAGTGGCCGCCTGT
TTAAAAAAGCCTGGAACGGGAAAAAACCGGGGCTTACCACCCACTTAAAC
CCTCTGCACCCACATCCCCCCTTTTCCCCTCCGTGGCGTAAAAAAACAAA
AAAAAGCCCCGACCAAAAAACCCCCCCCCTCCCCCACCATTTCTACCCCA
CCCCCGGGAGAGTGTGGAAAAGAGGGGGAG
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