DY305633

Overview
NameDY305633
Unique NameDY305633
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1281
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305633_ssr632 microsatellite DY305633_ssr632:632..643. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 4.396e-85
Identity = 126/177 (71.19%), Postives = 152/177 (85.88%), Query Frame = 1
Query:  241 LDKAAVVSDAEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSIGSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVPISIFWQIPQYFLLGAAEVCY 771
            LDKAAV+S+ E KSGD+SN W LCTVTQVEELKILIRMFPIWA+GI+FSAVYAQMST+FV+QG  M+  IGSF +PPA+L +FD  SVI WVP+YD+ IVP+ARKFTG ++GF+E+QRMGIGLF+SVLCM+AAA+VEI RL +A +L LV+    VPIS+ WQIPQYF+LGAAEV Y
Sbjct:  313 LDKAAVISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVESGAPVPISVLWQIPQYFILGAAEVFY 489          

HSP 2 Score: 71.633 bits (174), Expect = 4.396e-85
Identity = 47/96 (48.96%), Postives = 56/96 (58.33%), Query Frame = 2
Query:  773 FIGQLEFFYEQSSNAMRSLCSALFLLTTALGNYLSSFISDRG*LFSNWLGEKWDGSQNT*KKGLSNYFFWAFSWDPAFLYFWLFWLFGAQR*QPKK 1060
            FIGQLEFFY+QS +AMRSLCSAL LLT ALGNYLSS I      F+   G++   S N    G  +YFFW  +     L     + F A R + KK
Sbjct:  490 FIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNL-NSGHLDYFFWLLA--GLSLVNMAVYFFSAARYKQKK 582          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.020e-62
Identity = 102/176 (57.95%), Postives = 130/176 (73.86%), Query Frame = 1
Query:  244 DKAAVVSDAE-IKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSIG-SFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVPISIFWQIPQYFLLGAAEV 765
            DKAAV S ++ IK G+  NPW LC+VTQVEELK +I + P+WATGIVF+ VY+QMST+FV QG  MD  +G +F IP ASLS FD +SV+FW P+YD+ I+P+ARKFT  ERGF++LQRMGIGL +S+  M  A V+E+ RL   +     DQ   + +SIFWQIPQY L+G AEV
Sbjct:  296 DKAAVESQSDSIKDGEV-NPWRLCSVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQK-QIHMSIFWQIPQYLLIGCAEV 469          

HSP 2 Score: 62.3882 bits (150), Expect = 3.020e-62
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:  770 TFIGQLEFFYEQSSNAMRSLCSALFLLTTALGNYLSSFISDRG*LFSNWLGEKWDGSQNT*KKGLSNYFFWAFSWDPAFLYFWLFWLFGAQR*QPKKKAG 1069
            TFIGQLEFFY+Q+ +AMRSLCSAL L T ALGNYLS+ +       +   G+      N   +G  +YFF+  +   +FL F L +L+ ++R + KK  G
Sbjct:  471 TFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNL-NRGHLDYFFYLLA-TLSFLNF-LVYLWISKRYKYKKAVG 567          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 6.445e-52
Identity = 99/175 (56.57%), Postives = 135/175 (77.14%), Query Frame = 1
Query:  244 DKAAVVSDAEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSIG-SFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVPISIFWQIPQYFLLGAAEV 765
            DKAAV ++++ K    S+ W LCTVTQVEELK LIR+ PIWATGIVF++VY+QM T+FV QG  +D  +G +F IP ASLS FD +SV+FW P+YDK+IVP ARK+TG ERGF++LQR+GIGL +S+  M +A ++E+ RL   +   L ++  ++P++IFWQ+PQYFL+G AEV
Sbjct:  296 DKAAVETESDNKGAAKSSSWKLCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARLNYVQTHNLYNEE-TIPMTIFWQVPQYFLVGCAEV 469          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.770e-38
Identity = 76/167 (45.51%), Postives = 112/167 (67.07%), Query Frame = 1
Query:  268 AEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSI-GSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQ-NVSVPISIFWQIPQYFLLGAAE 762
            A +K+G  ++ W LCT T+VEE K ++RM P+     V S + AQ++TLFV+QG  +D  + GSF+IPPASLS F  +S++  + +YD++ V I RKFTG  RG + LQRMGIGL   +L M  A+V E  RL++A +  L+ Q  V +P++IF  +PQ+ L+G A+
Sbjct:  305 ASLKTGT-NHKWNLCTTTEVEETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERYRLKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMAD 470          

HSP 2 Score: 38.5058 bits (88), Expect = 5.770e-38
Identity = 15/37 (40.54%), Postives = 28/37 (75.68%), Query Frame = 2
Query:  776 IGQLEFFYEQSSNAMRSLCSALFLLTTALGNYLSSFI 886
            + +LEFFY+Q+  +M+SL ++    + A+GN++SSF+
Sbjct:  475 VAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFL 511          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.233e-34
Identity = 72/167 (43.11%), Postives = 107/167 (64.07%), Query Frame = 1
Query:  268 AEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSI-GSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQN-VSVPISIFWQIPQYFLLGAAE 762
            A +K+G  ++ W LCT+T+VEE K +++M P+     V S + AQ+ TLF++QG  +D  +  +F+IPPASL  F   S++  + IYD++ V   RK TG  RG + LQRMGIG+ L +L M  A++ E  RL++A E  L  Q  V +P+SIF  +PQY L+G A+
Sbjct:  305 ASLKTGS-THKWRLCTITEVEETKQMLKMLPVLFVTFVPSMMLAQIMTLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPRGITLLQRMGIGMILHILIMIIASITERYRLKVAAEHGLTHQTAVPIPLSIFTLLPQYVLMGLAD 470          

HSP 2 Score: 34.6538 bits (78), Expect = 1.233e-34
Identity = 20/69 (28.99%), Postives = 36/69 (52.17%), Query Frame = 2
Query:  776 IGQLEFFYEQSSNAMRSLCSALFLLTTALGNYLSSFISDRG*LFSNWLGEKWDGSQNT*KKGLSNYFFW 982
            I +LEFFY+Q+  +M+SL ++    + A+G ++SS +       +   G  W    N  +  L NY+ +
Sbjct:  475 IAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGRGWI-QNNLNESRLDNYYMF 542          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.091e-34
Identity = 71/176 (40.34%), Postives = 106/176 (60.23%), Query Frame = 1
Query:  235 RCLDKAAVVSDAEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSIGSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVPISIFWQIPQYFLLGAAE 762
            R LDKAA+       + +  N W L T+T VEE+K ++RM PIWAT I+F  V+AQ++TL V Q   +D SIGSF IPPAS++ F V  ++    +YD++ + + +K      G   LQR+G+GLF   + M+ AA+VE+ RLR A       +  ++P+  +  IPQY ++G  E
Sbjct:  303 RSLDKAAIRDQEAGVTSNVFNKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVK--TLPLGFYLLIPQYLIVGIGE 476          

HSP 2 Score: 33.113 bits (74), Expect = 2.091e-34
Identity = 24/86 (27.91%), Postives = 39/86 (45.35%), Query Frame = 2
Query:  773 FIGQLEFFYEQSSNAMRSLCSALFLLTTALGNYLSSFISDRG*LFSNWLGEKWDGSQNT*KKGLSNYFFWAFSWDPA--FLYFWLF 1024
            + GQL+FF  +    M+ + + L L T ALG + SS +     +   + G+      +   KG    F+W  +   A  FL F +F
Sbjct:  480 YTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVT---IVEKFTGKAHPWIADDLNKGRLYNFYWLVAVLVALNFLIFLVF 562          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.823e-33
Identity = 73/184 (39.67%), Postives = 106/184 (57.61%), Query Frame = 1
Query:  235 RCLDKAAVVS--DAEIKSGDFS-NPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSIG----SFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVE-INRLRLARELELVDQNVSVPISIFWQIPQYFLLGAAE 762
            R L+KA ++S  + EI S  F+ NPW LCT  +VEELK LI++ PIW+TGI+ S +    S+  + Q   MD  +     SF +P  S   F +I++  WV +YD+ ++P+A K  G+    S   RMG+GLF+S L M+ +A+VE   R +   +    + N  V IS  W +PQY L G AE
Sbjct:  292 RFLNKACLISNREEEIGSDGFALNPWRLCTTDKVEELKALIKVIPIWSTGIMMS-INTSQSSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHGLAE 474          

HSP 2 Score: 40.817 bits (94), Expect = 3.823e-33
Identity = 28/93 (30.11%), Postives = 47/93 (50.54%), Query Frame = 2
Query:  767 VTFIGQLEFFYEQSSNAMRSLCSALFLLTTALGNYLSSFISDRG*LFSNWLGEKWDGSQNT*KKGLSNYFFWA---FSWDPAFLYFWLFWLFG 1036
            +T IGQ EFFY +   +M S+ ++LF L  A+ + L+S + +     ++  G++   S N   KG  NY++W     S+     Y    W +G
Sbjct:  476 LTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNI-NKGHYNYYYWVLAIMSFINVIYYVICSWSYG 567          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.341e-16
Identity = 49/165 (29.70%), Postives = 93/165 (56.36%), Query Frame = 1
Query:  313 TVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGM------VMDTSIGSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGF--SELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNV------SVPISIFWQIPQYFLLGAAEV 765
            T  +VE++K L+++ P++   I +  VY QM T +V Q +      + + +    T+P A L+ FD + ++  +P+ DK++ PI R+      G   S L+R+ +G+F  +    AA ++E  RL L +E + ++Q +      +  +S++WQ+PQY L+G +E+
Sbjct:  308 TEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRR-----HGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKE-KTINQTIGNVVYHAADLSLWWQVPQYLLIGISEI 466          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.828e-15
Identity = 47/158 (29.75%), Postives = 91/158 (57.59%), Query Frame = 1
Query:  322 QVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGM---VMDTSIGSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGF--SELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQ--NV---SVPISIFWQIPQYFLLGAAEV 765
            +VE++K L+++ P++   I +  VY QM T +V Q +   +      + T+P A L+ FD + ++  +P+ DK++ P  +K     RG   S L+R+ +G+F  +  + AA ++E  RL + +  ++  Q  NV   +  ++++WQ+PQY L+G +E+
Sbjct:  315 KVEDVKALVKIIPVFLALIPYWTVYFQMQTTYVLQSLHLRIPQIFNNNHTLPAAWLTMFDAVLILILIPLKDKLVDPFLKK-----RGLLPSPLKRIAVGMFFVMCSVLAAGILESERLEIVKRDKIQQQIGNVTYYAANLTVWWQLPQYILIGISEI 467          
BLAST of DY305633 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.828e-15
Identity = 49/165 (29.70%), Postives = 90/165 (54.55%), Query Frame = 1
Query:  313 TVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGM------VMDTSIGSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGF--SELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNV------SVPISIFWQIPQYFLLGAAEV 765
            T  +VE++K L+++ P++   I +  VY QM T +V Q +      +   +    T+P A L+ FD + ++  +P+ DK++ P+ R+      G   S L+R+ +G+F       AA ++E  RL L +E + ++Q +      +  + I+WQIPQY L+G +E+
Sbjct:  307 TEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRR-----HGLLPSSLKRIAVGMFFVTCSAFAAGILESKRLDLVKE-KTINQTIGGVVYHAADLPIWWQIPQYVLIGISEI 465          
The following BLAST results are available for this feature:
BLAST of DY305633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PTR2_ARATH4.396e-8571.19Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH3.020e-6257.95Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH6.445e-5256.57Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3A_ARATH5.770e-3845.51Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR3B_ARATH1.233e-3443.11Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
CHL1_ARATH2.091e-3440.34Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR2X_ARATH3.823e-3339.67Probable peptide transporter At1g52190 OS=Arabidop... [more]
S15A4_HUMAN3.341e-1629.70Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
S15A4_XENLA2.828e-1529.75Solute carrier family 15 member 4 OS=Xenopus laevi... [more]
S15A4_RAT2.828e-1529.70Solute carrier family 15 member 4 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CH06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305633 ID=DY305633; Name=DY305633; organism=Citrus sinensis; type=EST; length=1281bp
GCTTGGATGTTGGACTGAGGAAATATACAGTCTTCTTGCATCTTATCTTT
TAGAATTTATCATTAATAAGAATTCCTTTTTTCTTTTCTGTTTGCATATG
GTAATGCTATTTAATTCCTGTAATCACTTCAGTCTATAGGGGGGAAGTTT
CAACTAACAGTTTCCTGAAATTTCGTATGCAATAAATCTTTGCTCCCAGA
AAAAGAAGCAGAGTAACTAATAGCCACTTTTCGCAGGTGCCTTGACAAAG
CTGCTGTAGTTTCAGATGCTGAGATCAAAAGTGGTGATTTCTCCAATCCT
TGGATTCTTTGCACTGTAACTCAGGTGGAGGAACTAAAAATTTTGATCCG
AATGTTTCCTATCTGGGCTACTGGAATTGTCTTTTCTGCTGTATATGCCC
AAATGTCTACATTGTTTGTGGAACAAGGGATGGTGATGGACACGTCTATT
GGTTCTTTCACCATTCCTCCTGCCTCCCTCTCAAGTTTTGATGTTATCAG
TGTTATTTTCTGGGTACCTATATATGATAAGATCATTGTCCCAATAGCAA
GGAAGTTCACAGGCAAGGAGAGGGGTTTCTCAGAGTTGCAGCGAATGGGA
ATTGGCCTCTTTCTGTCAGTTCTCTGCATGTCTGCTGCTGCTGTGGTTGA
GATCAATAGATTGCGTCTTGCAAGAGAGCTTGAGCTTGTTGACCAAAATG
TTTCTGTGCCAATTAGCATCTTTTGGCAAATACCACAGTATTTCTTGTTG
GGTGCGGCAGAAGTATGTTACATTCATTGGACAGCTTGAGTTCTTCTATG
AACAATCCTCAAATGCCATGCGGAGCTTGTGCAGTGCGTTATTTCTTCTG
ACAACAGCGTTGGGCAATTACCTTAGTTCTTTTATTTCTGACAGGGGGTA
ATTATTTTCCAACTGGCTGGGGGAAAAATGGGATGGATCCCAAAATACTT
GAAAAAAGGGTCTCTCTAATTATTTTTTCTGGGCTTTTAGCTGGGACCCA
GCATTTTTATATTTTTGGTTGTTTTGGTTGTTTGGGGCGCAAAGATAACA
ACCAAAAAAAAAGGCCGGGTTAATTTTATTTACAGAAAAGAACCCCAAAA
CCCCCCTTTCCCCTCAAAGTGTTTGGTAATATAAAAGTACTGGCCGCCTC
TCCCACGCCCCACAAAACCCCCCCCCAAAAAGTTCCGAAAAAAAAAAGGG
GTTTGTAAAAAAAAAAGAAAGTAGAAATTATAAATTTTTTTTTTTATTAA
TTAAAAAAGGCGGTCTTGTGTTTGATTTTTA
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