DY305616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.197e-27 Identity = 65/175 (37.14%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L++++++Y+ Y ++T +D + C LL +V F K++E LDALCD ++P +TE ++++REGDP+DEM+F+++GKL T T ++G +S++ L GDF GEEL+ WAL S ++P S RT++AL V+AF L ADDLK V Sbjct: 437 LRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEY-------------LGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFV 598
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.076e-26 Identity = 62/175 (35.43%), Postives = 103/175 (58.86%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ FTE T+++REGDP++EM+F+++G+L + T +SG + LL++GDF GEEL+ WAL + ++P S RT++ALT V+AF L A++LK V Sbjct: 453 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFN-------------RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 614
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 5.246e-26 Identity = 61/175 (34.86%), Postives = 103/175 (58.86%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ +TE T+++REGDP++EM+F+++G+L + T +SG + LL++GDF GEEL+ WAL + ++P S RT++ALT V+AF L A++LK V Sbjct: 459 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN-------------RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 620
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 8.949e-26 Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP FTE ++L+REGDP++EM+F+++G+L + T G S + R LL++GDF G+EL+ WAL + ++P S RT++ALT V+AF L+AD+LK V Sbjct: 465 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVT----TDGGRSGFYNR---------SLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFV 626
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.994e-25 Identity = 64/175 (36.57%), Postives = 103/175 (58.86%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD +KP +TE+++ IREGDP++EM+FV++GKL + T ++G ++ + L+ DF GE+L+ WAL + S P S RT+QALT V+AF L ADDLK+V Sbjct: 425 LRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVY-------------LKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLV 586
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 3.401e-25 Identity = 61/175 (34.86%), Postives = 101/175 (57.71%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP +TE ++L+REGDP++EM+F+++G+L + T +SG + LL++GDF GEEL+ WAL + ++P S RT +ALT V+AF L+AD+LK V Sbjct: 464 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN-------------RSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFV 625
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 4.441e-25 Identity = 60/175 (34.29%), Postives = 101/175 (57.71%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L+++V++Y Y +T +D + C L+++V F+ +++ LDA+C +KP FTE T+L+REGDP+DEM+F+++G+L + T +SG + LL++G+F GEEL+ WAL + ++P S RT++ALT V+AF L +++LK V Sbjct: 449 LRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFN-------------RSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFV 610
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.429e-23 Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD ++P +TE++++IREGDP+ EM+FV++G+L + T +SG ++ + L+ DF GE+L+ WAL + S P S RT+QALT V+AF L A+DLK V Sbjct: 424 LRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVN-------------LKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSV 585
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 4.157e-23 Identity = 62/175 (35.43%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIV 526 L+Q V+KY Y T +D + C++L+++V F +++E LDA+C+ +KP TE T L+REGDP++EM+F+++G L +YT ++G +S L+ GDF GEEL+ WAL R +P S RT++A+ V+AF L A+DL+ V Sbjct: 422 LRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNS-------------CLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFV 583
BLAST of DY305616 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 4.596e-22 Identity = 58/177 (32.77%), Postives = 99/177 (55.93%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFKDIQSGSTSSDHKRYDGKNTRKEDLLQDGDFYGEELIDWALRDRFSFDIPKSNRTIQALTNVDAFMLMADDLKIVFN 532 L+ +V++Y+ Y T +D + C +L+++V F ++++ LDA+C+ + + TE T+L+REGD I EM+F+++G+L + T ++G +S +L+ GDF GEEL+ WAL + + ++P S RT++AL V+AF L A+DLK V N Sbjct: 432 LRNRVRRYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSI-------------ILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVAN 595 The following BLAST results are available for this feature:
BLAST of DY305616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305616 ID=DY305616; Name=DY305616; organism=Citrus sinensis; type=EST; length=1150bpback to top |