DY305585

Overview
NameDY305585
Unique NameDY305585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1188
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.400e-29
Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P  +  +YLVPADLTV QFVYVIRKRIKLSAEKAIFIFVDNVLPP GA+MS++Y+EKKD+DGFLYVTYSGENTF
Sbjct:   40 SDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.828e-29
Identity = 61/81 (75.31%), Postives = 72/81 (88.89%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTFETTS 915
            S +P  +  +YLVP+DLTV QFVYVIRKRIKLSAEKAIFIFVDNVLPPTG +MS++Y++KKDEDGFLY+TYSGENTF  +S
Sbjct:   41 SEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGASS 121          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 9.074e-29
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P  +  +YLVPADLTV QFVYVIRKRI+LSAEKAIFIFVDNVLPPTGA+MS IY E K+EDGFLYVTYSGENTF
Sbjct:   40 SDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.185e-28
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTFETTSQFTL 927
            S +P  +  +YLVPADLTV QFVYVIRKRIKLS+E+AIFIFVD+VLPPT A+MS+IY+E KDEDGFLYVTYSGENTF    Q+ L
Sbjct:   39 SDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFGDLEQYRL 123          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.640e-28
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLTV QFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 2.640e-28
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLTV QFVYV+RKRIKLSAEKAIFIFV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.003e-27
Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLTV QFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.003e-27
Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLTV QFVYV+RKRIKLS EKAIFIFV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 SDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.310e-27
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLTV QFVYV+RKRIKLS EKAIFIFV N+LPPT AIMSAIY+E KDEDGFLY++YSGENTF
Sbjct:   40 SDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.711e-27
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P  +  +YLVPADLTV QFVYV+RKRIKLSAEKAIF+FV N LPPT A+MSAIY E KDEDGFLY+TYSGENTF
Sbjct:   40 SDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTF 116          
The following BLAST results are available for this feature:
BLAST of DY305585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ATG8F_ARATH1.400e-2980.52Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8E_ARATH1.828e-2975.31Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8G_ARATH9.074e-2980.52Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8_YARLI1.185e-2872.94Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8C_ORYSJ2.640e-2877.92Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI2.640e-2877.92Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8B_ORYSJ1.003e-2776.62Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI1.003e-2776.62Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8D_ARATH1.310e-2776.62Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8C_ARATH1.711e-2776.62Autophagy-related protein 8c OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CB11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305585 ID=DY305585; Name=DY305585; organism=Citrus sinensis; type=EST; length=1188bp
GATTAACACTTGAGCTGCATTATTTGAAACAATTCTTGGTAGCAATCTCA
TCAACTTTACGTAGCACTCTCATTCCTTTCTTTTCTAAGGTATATTGATC
TCATTCCTCTGTGGTAAGGGGCAGCCAGCAGAGTATGGCAACCTCTTACT
TGTGCTACTTTGTTTGTAATATTACCATAGTTTTCATTGTTATCTTATAT
TGTTCTTCCTGTTTCATTTAGCTGATCACATGGCTCTGTCATGTGAGTCT
GCATACATCCTATGACAGCTTCTTGCAGCTATTTTCTTTGTGGGTCTTGC
TAGCTTACAGTTTTTGTATATTACAGCCCATAAAGAAGGGGCGTTAACTG
GCCCTCATCCAGTTACCCCTTTTGGCCTGGCTGTACATTACAGTAAATGT
AAGGTAGCCATGTCTTTTTTCCATTTTTTTCCTTTATATTTGAGATTAAA
ACCTAAGACCTAATCAAAATTTAGTCATTCATTTGTTTACCTGATAATCA
TCATATCTATTACTTCTTTTTCTTTGTCGCATTTCTTTGAAAGATCATTG
TATTTGTAGAATTGGCTGTCGCTTCAGTGTTTATAGTTGCTATCATTGCT
GACAGATGGTAATTTAAATGTCCATATGGACTATAACAACTCGCTACTTG
ATTCTATCATACTAATAAGGTTTCCTCTTTACCTGAATGTGAAAATTACA
GGTATCTTGTTCCAGCTGACCTGACTGTANGACAATTTGTCTATGTCATC
CGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTGGA
TAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACAAGGAAA
AAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACACA
TTTGAAACCACATCCCAGTTTACCCTTGGAATATTATTCGCCTCTTGTGT
GGGTTCCTGTGGCGACCACATTTTATCTTATTAACATCCTTGCTTTCCGC
CTATAATTCCTTTATCGGGCAAATTTATTATTTAAAAAAAAATGGCCCGT
AAAAAATGAACGGTTACTAATGTTAATAAATTCTAAAGGCAAAAAAATGA
CAAATTCTTTCTTCCCTTTCCTTTTTTAAAAAATTTTTTTTTCGGTTTGG
GGATTTTTTCGGGGGGGTTTCCATCCTGGAATATAATT
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