EY702578

Overview
NameEY702578
Unique NameEY702578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 1.949e-91
Identity = 148/178 (83.15%), Postives = 165/178 (92.70%), Query Frame = 2
Query:   26 KRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCP 559
            KRKP+ +I+FRDGVSESQF QV+N+EL+QIIEACKFLDEKW+PKF VIVAQKNHHTKFFQSGSPDNVPPGTVVD +VCHPRNYDFY+CAHAGMIGT+RPTHYHVL DEIGFS D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QVG+F+KF+D+S+ SSSQGG TS G    P
Sbjct:  718 KRKPDHVIVFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQSGSPDNVPPGTVVDKQVCHPRNYDFYMCAHAGMIGTTRPTHYHVLHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTSVGSVPVP 895          

HSP 2 Score: 38.1206 bits (87), Expect = 1.949e-91
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 3
Query:  549 VPVPQLPRLQEKVGNSMFFC 608
            VPVP+LPRL EKV +SMFFC
Sbjct:  892 VPVPELPRLHEKVRSSMFFC 911          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 4.749e-87
Identity = 145/178 (81.46%), Postives = 161/178 (90.45%), Query Frame = 2
Query:   26 KRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCP 559
            KRKP+Q+IIFRDGVSESQF QVLN+EL+QIIEACKFLDE W+PKF +IVAQKNHHTKFF  GS +NVPPGTVVDN VCHPRN DFY+CAHAGMIGT+RPTHYH+L DEIGFS+D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QV  F+KFD++SETSSS GG TSAG    P
Sbjct:  711 KRKPDQVIIFRDGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQNNVPPGTVVDNAVCHPRNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVP 888          

HSP 2 Score: 34.6538 bits (78), Expect = 4.749e-87
Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  552 PVPQLPRLQEKVGNSMFFC 608
            PVP+LPRL  KV +SMFFC
Sbjct:  886 PVPELPRLHNKVRSSMFFC 904          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 5.667e-73
Identity = 128/179 (71.51%), Postives = 152/179 (84.92%), Query Frame = 2
Query:   23 RKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCP 559
            ++RKP+QIIIFRDGVSESQF+QVLNVELNQII+A +++D+   PKF VI+AQKNHHTK FQ  +PDNVPPGTVVD+ + HPR YDFY+ AHAG IGTSRPTHYHVL DEIGF  D++Q+LV SLSYVYQRSTTAISVVAPICYAHLAA+Q+G FMKF++ +ETSS  GG+ S+     P
Sbjct:  689 QQRKPKQIIIFRDGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLFQENTPDNVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAETSSGSGGVPSSSGAVVP 867          

HSP 2 Score: 28.8758 bits (63), Expect = 5.667e-73
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  555 VPQLPRLQEKVGNSMFFC 608
            VP+LPRL   V +SMFFC
Sbjct:  866 VPELPRLHADVCSSMFFC 883          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 4.696e-66
Identity = 116/166 (69.88%), Postives = 134/166 (80.72%), Query Frame = 2
Query:   56 RDGVSESQFNQVLNVELNQIIEACKFL-----DEKWAPKFAVIVAQKNHHTKFFQSGSPD---NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGG 529
            +DGVSE QFNQVLN+EL QII+AC+FL     D +W+PKF VIVAQKNHHTKFFQ+   +   NVPPGTVVD  +CHPRN DFY+CAHAGMIGT+RPTHYHVL DE  F+ D+LQELVH+LSYVYQRSTTAIS VAPICYAHLAA+QV  F++ DD +   S  GG
Sbjct:  701 KDGVSEGQFNQVLNIELAQIIKACEFLANEKNDSEWSPKFTVIVAQKNHHTKFFQTDRSNKVVNVPPGTVVDKGICHPRNCDFYMCAHAGMIGTTRPTHYHVLHDENNFTPDDLQELVHNLSYVYQRSTTAISGVAPICYAHLAAAQVSQFVRLDDAASEGSGDGG 866          

HSP 2 Score: 33.113 bits (74), Expect = 4.696e-66
Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 3
Query:  546 PVPVPQLPRLQEKVGNSMFFC 608
            P PVP+LPRL   V  SMFFC
Sbjct:  869 PRPVPELPRLHPDVRQSMFFC 889          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.662e-44
Identity = 94/194 (48.45%), Postives = 121/194 (62.37%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCPPAA*TAGESG 589
            KP++II +RDGVSE QF QVL  ELN I +AC  L+  + PK   IV QK HHT+ F     D        N+ PGTVVD+K+CHP  +DFYLC+HAG+ GTSRP HYHVL+DE  F++D LQ L ++L Y Y R T ++S+V P  YAHLAA +   +M+  D S++SS   G    GP S    + T    G
Sbjct:  799 KPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME-PDTSDSSSVVSGPGVRGPLSGSSTSRTRAPGG 991          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 1.662e-44
Identity = 93/203 (45.81%), Postives = 125/203 (61.58%), Query Frame = 2
Query:   17 RVRKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCPPAA*TAGESGQFNV 601
            R   +KP++II +RDGVSE QF QVL  EL+ I +AC  L+  + P    +V QK HHT+ F +   D        N+ PGTVVD+K+CHP  +DFYLC+HAG+ GTSRP HYHVL+DE  F++DELQ L ++L Y Y R T ++S+V P  YAHLAA +   +M+ +     S + G  TS G    PP   +A  +G   V
Sbjct:  902 RATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRG---LPPGVRSARVAGNVAV 1101          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.086e-44
Identity = 87/177 (49.15%), Postives = 114/177 (64.41%), Query Frame = 2
Query:   29 RKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF--------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMT 535
            R+PE+II +RDGVSE QF+ VL  E++ I +AC  L+E + P    +V QK HHT+ F         +    N+ PGTVVD ++CHP  +DFYLC+HAG+ GTSRPTHYHVL+DE  F++D LQ L ++L Y Y R T A+SVV P  YAHLAA +   ++      E  SS GG T
Sbjct:  855 RRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYV------EGESSDGGST 1025          

HSP 2 Score: 28.4906 bits (62), Expect = 2.086e-44
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  546 PVPVPQLPRLQEKVGNSMFFC 608
            PV V QLP+++E V + MF+C
Sbjct: 1038 PVEVRQLPKIKENVKDVMFYC 1058          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.264e-43
Identity = 83/171 (48.54%), Postives = 112/171 (65.50%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF--------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSS 520
            KP +II +RDGVSE QF+QVL  E++ I +AC  ++E + P    +V QK HHT+ F        Q     N+ PGTVVD K+CHP  +DFYLC+H+G+ GTS PTHY+VLFDE  FS+D LQ L + L Y Y R T ++S+V P+ YAHLAAS+   +++   L +  SS
Sbjct:  688 KPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRARHYLEEGSLPDHGSS 858          

HSP 2 Score: 25.7942 bits (55), Expect = 2.264e-43
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  549 VPVPQLPRLQEKVGNSMFFC 608
            VPV  LP ++E V   MF+C
Sbjct:  873 VPVKPLPEIKENVKQFMFYC 892          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.840e-43
Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 2
Query:   29 RKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCPP 562
            +KP +II +RDGVSE QF QVL  EL+ I +AC  L+  + P    +V QK HHT+ F +   D        N+ PGTVVD+K+CHP  +DFYLC+HAG+ GTSRP HYHVL+DE  F++DE+Q L ++L Y Y R T ++SVV P  YAHLAA +   +M+  ++SE  ++    T     S  P
Sbjct:  780 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME-PEMSENQTTSKSSTGTNGTSVKP 964          

HSP 2 Score: 22.7126 bits (47), Expect = 3.840e-43
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  555 VPQLPRLQEKVGNSMFFC 608
            V  LP ++EKV   MF+C
Sbjct:  962 VKPLPAVKEKVKRVMFYC 979          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.094e-43
Identity = 87/184 (47.28%), Postives = 116/184 (63.04%), Query Frame = 2
Query:   17 RVRKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAG 544
            R   +KP++II +RDGVSE QF QVL  EL+ I +AC  L+  + P    +V QK HHT+ F +   D        N+ PGTVVD+K+CHP  +DFYLC+HAG+ GTSRP HYHVL+DE  F++D LQ L ++L Y Y R T ++S+V P  YAHLAA +   +M+ D     S + G  T  G
Sbjct:  865 RATGQKPQRIIFYRDGVSEGQFYQVLFYELDAIRKACASLEADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGAHTRGG 1048          
The following BLAST results are available for this feature:
BLAST of EY702578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
AGO4B_ORYSJ1.949e-9183.15Protein argonaute 4B OS=Oryza sativa subsp. japoni... [more]
AGO4A_ORYSJ4.749e-8781.46Protein argonaute 4A OS=Oryza sativa subsp. japoni... [more]
AGO16_ORYSJ5.667e-7371.51Protein argonaute 16 OS=Oryza sativa subsp. japoni... [more]
AGO15_ORYSJ4.696e-6669.88Protein argonaute 15 OS=Oryza sativa subsp. japoni... [more]
AGO1C_ORYSJ1.662e-4448.45Protein argonaute 1C OS=Oryza sativa subsp. japoni... [more]
AGO1B_ORYSJ1.662e-4445.81Protein argonaute 1B OS=Oryza sativa subsp. japoni... [more]
MEL1_ORYSJ2.086e-4449.15Protein argonaute MEL1 OS=Oryza sativa subsp. japo... [more]
AGO11_ORYSJ2.264e-4348.54Protein argonaute 11 OS=Oryza sativa subsp. japoni... [more]
PNH1_ORYSJ3.840e-4346.77Protein argonaute PNH1 OS=Oryza sativa subsp. japo... [more]
AGO1A_ORYSJ4.094e-4347.28Protein argonaute 1A OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-F07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702578 ID=EY702578; Name=EY702578; organism=Citrus sinensis; type=EST; length=868bp
TTCCTTGGTCGACCCACGCGTCCGGAAAAGGAAACCTGAACAGATCATCA
TATTCAGGGATGGTGTCAGTGAATCACAGTTTAATCAAGTCTTGAACGTT
GAACTGAATCAGATTATAGAGGCGTGCAAGTTTCTGGATGAGAAGTGGGC
CCCAAAGTTTGCGGTGATTGTTGCACAGAAGAATCACCATACAAAATTTT
TCCAGTCGGGATCTCCTGACAATGTTCCTCCTGGAACTGTTGTTGACAAC
AAAGTCTGTCATCCAAGAAACTATGACTTCTACCTTTGTGCCCATGCTGG
AATGATTGGTACTTCAAGGCCAACACATTACCACGTTCTATTTGATGAAA
TTGGCTTTTCAAGTGATGAGCTGCAGGAACTAGTGCACTCACTTTCTTAT
GTGTACCAGAGAAGCACTACAGCCATTTCTGTAGTTGCTCCAATTTGCTA
TGCCCACTTGGCAGCAAGCCAGGTAGGATCATTCATGAAGTTTGACGACT
TATCAGAGACATCTTCTAGCCAGGGTGGGATGACATCTGCTGGACCCTGT
TCCTGTCCCCCAGCTGCCTAGACTGCAGGAGAAAGTGGGCAATTCAATGT
TCTTCTGTTGAGACACTTGTGTGGCTTCTACCGGCAATCAAAATCCTATC
CAAGGAGTTTGTATATAGTTAGCCTTTTTGGTTTCCTCTGGACCATCCAG
GGGGCAAGGTGTCTAGAAATTGTAGGGATGCCTTGAAATCTCTGGTATTA
ATTCTGGGTCTAAAACCCAAAGGGCCCGGGGCCTTTGTTTTGGGGGAATA
CCGGGGGGTGTGCACCTTGCACGCCCGGGCTTCCCCGAGCTCCTTTTTTC
CCAGACAGCAGGGGGGGG
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