EY702578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.949e-91 Identity = 148/178 (83.15%), Postives = 165/178 (92.70%), Query Frame = 2 Query: 26 KRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCP 559 KRKP+ +I+FRDGVSESQF QV+N+EL+QIIEACKFLDEKW+PKF VIVAQKNHHTKFFQSGSPDNVPPGTVVD +VCHPRNYDFY+CAHAGMIGT+RPTHYHVL DEIGFS D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QVG+F+KF+D+S+ SSSQGG TS G P Sbjct: 718 KRKPDHVIVFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQSGSPDNVPPGTVVDKQVCHPRNYDFYMCAHAGMIGTTRPTHYHVLHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTSVGSVPVP 895 HSP 2 Score: 38.1206 bits (87), Expect = 1.949e-91 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 549 VPVPQLPRLQEKVGNSMFFC 608 VPVP+LPRL EKV +SMFFC Sbjct: 892 VPVPELPRLHEKVRSSMFFC 911
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 4.749e-87 Identity = 145/178 (81.46%), Postives = 161/178 (90.45%), Query Frame = 2 Query: 26 KRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCP 559 KRKP+Q+IIFRDGVSESQF QVLN+EL+QIIEACKFLDE W+PKF +IVAQKNHHTKFF GS +NVPPGTVVDN VCHPRN DFY+CAHAGMIGT+RPTHYH+L DEIGFS+D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QV F+KFD++SETSSS GG TSAG P Sbjct: 711 KRKPDQVIIFRDGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQNNVPPGTVVDNAVCHPRNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVP 888 HSP 2 Score: 34.6538 bits (78), Expect = 4.749e-87 Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 3 Query: 552 PVPQLPRLQEKVGNSMFFC 608 PVP+LPRL KV +SMFFC Sbjct: 886 PVPELPRLHNKVRSSMFFC 904
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 267.7 bits (683), Expect = 5.667e-73 Identity = 128/179 (71.51%), Postives = 152/179 (84.92%), Query Frame = 2 Query: 23 RKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCP 559 ++RKP+QIIIFRDGVSESQF+QVLNVELNQII+A +++D+ PKF VI+AQKNHHTK FQ +PDNVPPGTVVD+ + HPR YDFY+ AHAG IGTSRPTHYHVL DEIGF D++Q+LV SLSYVYQRSTTAISVVAPICYAHLAA+Q+G FMKF++ +ETSS GG+ S+ P Sbjct: 689 QQRKPKQIIIFRDGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLFQENTPDNVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAETSSGSGGVPSSSGAVVP 867 HSP 2 Score: 28.8758 bits (63), Expect = 5.667e-73 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 555 VPQLPRLQEKVGNSMFFC 608 VP+LPRL V +SMFFC Sbjct: 866 VPELPRLHADVCSSMFFC 883
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 4.696e-66 Identity = 116/166 (69.88%), Postives = 134/166 (80.72%), Query Frame = 2 Query: 56 RDGVSESQFNQVLNVELNQIIEACKFL-----DEKWAPKFAVIVAQKNHHTKFFQSGSPD---NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGG 529 +DGVSE QFNQVLN+EL QII+AC+FL D +W+PKF VIVAQKNHHTKFFQ+ + NVPPGTVVD +CHPRN DFY+CAHAGMIGT+RPTHYHVL DE F+ D+LQELVH+LSYVYQRSTTAIS VAPICYAHLAA+QV F++ DD + S GG Sbjct: 701 KDGVSEGQFNQVLNIELAQIIKACEFLANEKNDSEWSPKFTVIVAQKNHHTKFFQTDRSNKVVNVPPGTVVDKGICHPRNCDFYMCAHAGMIGTTRPTHYHVLHDENNFTPDDLQELVHNLSYVYQRSTTAISGVAPICYAHLAAAQVSQFVRLDDAASEGSGDGG 866 HSP 2 Score: 33.113 bits (74), Expect = 4.696e-66 Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 3 Query: 546 PVPVPQLPRLQEKVGNSMFFC 608 P PVP+LPRL V SMFFC Sbjct: 869 PRPVPELPRLHPDVRQSMFFC 889
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.662e-44 Identity = 94/194 (48.45%), Postives = 121/194 (62.37%), Query Frame = 2 Query: 32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCPPAA*TAGESG 589 KP++II +RDGVSE QF QVL ELN I +AC L+ + PK IV QK HHT+ F D N+ PGTVVD+K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ D S++SS G GP S + T G Sbjct: 799 KPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME-PDTSDSSSVVSGPGVRGPLSGSSTSRTRAPGG 991
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 1.662e-44 Identity = 93/203 (45.81%), Postives = 125/203 (61.58%), Query Frame = 2 Query: 17 RVRKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCPPAA*TAGESGQFNV 601 R +KP++II +RDGVSE QF QVL EL+ I +AC L+ + P +V QK HHT+ F + D N+ PGTVVD+K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++DELQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G TS G PP +A +G V Sbjct: 902 RATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRG---LPPGVRSARVAGNVAV 1101
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.086e-44 Identity = 87/177 (49.15%), Postives = 114/177 (64.41%), Query Frame = 2 Query: 29 RKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF--------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMT 535 R+PE+II +RDGVSE QF+ VL E++ I +AC L+E + P +V QK HHT+ F + N+ PGTVVD ++CHP +DFYLC+HAG+ GTSRPTHYHVL+DE F++D LQ L ++L Y Y R T A+SVV P YAHLAA + ++ E SS GG T Sbjct: 855 RRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYV------EGESSDGGST 1025 HSP 2 Score: 28.4906 bits (62), Expect = 2.086e-44 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 546 PVPVPQLPRLQEKVGNSMFFC 608 PV V QLP+++E V + MF+C Sbjct: 1038 PVEVRQLPKIKENVKDVMFYC 1058
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 2.264e-43 Identity = 83/171 (48.54%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF--------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSS 520 KP +II +RDGVSE QF+QVL E++ I +AC ++E + P +V QK HHT+ F Q N+ PGTVVD K+CHP +DFYLC+H+G+ GTS PTHY+VLFDE FS+D LQ L + L Y Y R T ++S+V P+ YAHLAAS+ +++ L + SS Sbjct: 688 KPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRARHYLEEGSLPDHGSS 858 HSP 2 Score: 25.7942 bits (55), Expect = 2.264e-43 Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 3 Query: 549 VPVPQLPRLQEKVGNSMFFC 608 VPV LP ++E V MF+C Sbjct: 873 VPVKPLPEIKENVKQFMFYC 892
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 3.840e-43 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 2 Query: 29 RKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCPP 562 +KP +II +RDGVSE QF QVL EL+ I +AC L+ + P +V QK HHT+ F + D N+ PGTVVD+K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++DE+Q L ++L Y Y R T ++SVV P YAHLAA + +M+ ++SE ++ T S P Sbjct: 780 QKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME-PEMSENQTTSKSSTGTNGTSVKP 964 HSP 2 Score: 22.7126 bits (47), Expect = 3.840e-43 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3 Query: 555 VPQLPRLQEKVGNSMFFC 608 V LP ++EKV MF+C Sbjct: 962 VKPLPAVKEKVKRVMFYC 979
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.094e-43 Identity = 87/184 (47.28%), Postives = 116/184 (63.04%), Query Frame = 2 Query: 17 RVRKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAG 544 R +KP++II +RDGVSE QF QVL EL+ I +AC L+ + P +V QK HHT+ F + D N+ PGTVVD+K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ D S + G T G Sbjct: 865 RATGQKPQRIIFYRDGVSEGQFYQVLFYELDAIRKACASLEADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGAHTRGG 1048 The following BLAST results are available for this feature:
BLAST of EY702578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702578 ID=EY702578; Name=EY702578; organism=Citrus sinensis; type=EST; length=868bpback to top |