DY305569

Overview
NameDY305569
Unique NameDY305569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1297
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13660 contig Csv1_Contig13660:214..1517. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY305569 vs. ExPASy Swiss-Prot
Match: TIF9_ARATH (Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.410e-24
Identity = 70/140 (50.00%), Postives = 92/140 (65.71%), Query Frame = 3 
Query:    3 INPEIIKSVIAS-----GSAKSSISLPSTPKEEPITFPDVPLYRHIPKSGSENVSETAPLTIFYNGTVAVFDVHREKAEHILKLAVEGNSKSFESN---DANV--ASDQQQQLLETLNTGDLPIARRKSLQRFLEKRKER 392
            I+PEIIKS++AS      S+  S S+PSTP+E+    P  P++  + +S +E VS T P+TIFYNG+V+VF V R KA  I+K+A E  SK  ES+   D +V   +  + +L      GDLPIARRKSLQRFLEKRKER
Sbjct:   46 IDPEIIKSLLASTGNNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185
The following BLAST results are available for this feature:
BLAST of DY305569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIF9_ARATH4.410e-2450.00Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1BH09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305569 ID=DY305569; Name=DY305569; organism=Citrus sinensis; type=EST; length=1297bp
GGATTAATCCTGAGATTATTAAATCTGTGATTGCTTCCGGTTCTGCGAAA
TCATCAATCTCTTTGCCGTCTACTCCAAAAGAAGAGCCGATTACGTTTCC
CGACGTGCCTCTGTACAGGCACATTCCAAAGTCTGGTTCAGAGAACGTTT
CGGAAACAGCTCCTCTGACTATATTTTATAACGGAACCGTCGCTGTTTTT
GATGTTCATCGAGAGAAGGCTGAGCACATTCTGAAACTTGCTGTTGAAGG
AAACTCAAAAAGTTTCGAATCAAATGATGCTAATGTTGCAAGCGATCAGC
AACAACAGCTGCTTGAGACTCTTAATACTGGAGATCTGCCAATTGCGAGG
AGAAAGTCACTCCAGAGATTTCTGGAGAAACGCAAAGAGAGGAATGATAT
GGAGTCTGATATCAAGCAACTAAGCGATTGACTTTGGTGTCTCCTTATTC
ATGCCACACTTAAAAAAACGCGTTTTGGTAATTGGGACATGAATATCAAT
GGATATTGATGTTACTGCCGGCCTAAAAAGATGAGAAAGTTAATGGGCAC
AAGAGTAGTTTTGTAGAAATTCTGTTTCCATCTATTCGGAAGGTGACCTT
TTGCTAGAAATCAATAGCCTGCCTCGGGTGACCCTCTGGCATTGATATTA
TAAACAAATTATCTTTACTTTTCTCTTTGCGACCACTTCTTGAGATTTCC
ACACTACGTTTTATGCTGGTAATTTGATTAATAACACTATTCTGTCGTAA
GCCTCAATGTATACAAATCCCATTTGTAATATCGCGCACAGTCCGTCTTT
TTTGGGCAGATATTTTTGAAAGATTAAACCGCGTTTGGAGAACCTGGATT
AGATTTATTGGTAGCTTTAAATAAAAATACCCTGAAGGGGGGCCCCTTTT
ATCCCTTTCCCCCCAAAAAAGACCCAATGTTAATTCTCCGTACTCTTTTT
TCTCCCGGTGGGGGATGGAAAAGCCTCTGCGAGCGTACCAGAAAGTGAGG
TCCATAAGAGGCCCCTCGGGCATAAACCCCCCGGGAGGGTAGGGGAAAAA
AGCCCCGACACGAACCTCCTGTTCCAAAGAGGTCTCCCGAGGCGGGTTGG
GTGTGGGGGGAATTGACGACACCTGTTTTGGTTGTATAAGGTTTATGCCT
CTTTATTTTAGTTAGTAACCCGCCTCCGCCTATTTTGAAATGTCGTCTCN
GCGCCCGAAACTCCCGTCTGACATCCCTCGTTACACNGATCATCCGCATA
ATGGGTACGAAAGTCAAAACCCAAGAAGAGGAGTCAGGGAGATGTGG
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