DY305541

Overview
NameDY305541
Unique NameDY305541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6674 contig Csv1_Contig6674:1..953. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305541 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.883e-21
Identity = 55/149 (36.91%), Postives = 89/149 (59.73%), Query Frame = 1
Query:   40 TDSQNCEESNGFRASLFFLAVYLAALGNGCVTPSMKTRDADKVDLNDPKRSKKLSSYFNAAYFAFSTCELVALTVLVWVQTHSGMYVGFGVSAAAMALGLFSVVSGTLYYRDERPQGSIFTPIAHVFVAAMLKRKKICPSNPQMLHGLN 486
            T S +CE+++G + ++ +LA+YL ALG G V  S+    +D+ D  +PK   K++ +FN  +F  +   L+A+TVLV+VQ   G   G+G+ A A+ L L   ++GT  YR ++  GS  T +A V VAA   RK   P++P  L+ ++
Sbjct:  133 TTSSHCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIVAAWRNRKLELPADPSYLYDVD 281          
BLAST of DY305541 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.293e-20
Identity = 69/206 (33.50%), Postives = 105/206 (50.97%), Query Frame = 1
Query:   67 NGFRASLFFLAVYLAALGNGCVTPSMKTRDADKVDLNDPKRSKKLSSYFNAAYFAFSTCELVALTVLVWVQTHSGMYVGFGVSAAAMALGLFSVVSGTLYYRDERPQGSIFTPIAHVFVAAMLKRKKICPSNPQMLHGL--NRNNVPNDSGTVFLTQIVRFLDKPCIAVEYRTI*IRTSVENS---ALSRHVSKLNYGLRLVPIFA 669
            N  + ++FF+A+Y+ ALG G + P + +  AD+ D ND     K SS+FN  YF+ +   L+A TVLVW+Q + G   GFGV   AM + +     G+ +YR +RP GS  T I  V VAA  K     P +  +L     + +N+      V  T  ++F DK   AVE ++  I+    N         V +L   + L+P++A
Sbjct:  135 NSSQTAVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKISVKVPEDKSLLFETADDESNIKGSRKLVH-TDNLKFFDK--AAVESQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVWA 337          
BLAST of DY305541 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.563e-20
Identity = 68/219 (31.05%), Postives = 112/219 (51.14%), Query Frame = 1
Query:   22 PHATCLTDSQNCEESNGFRASLFFLAVYLAALGNGCVTPSMKTRDADKVDLNDPKRSKKLSSYFNAAYFAFSTCELVALTVLVWVQTHSGMYVGFGVSAAAMALGLFSVVSGTLYYRDERPQGSIFTPIAHVFVAAMLKRKKICPSNPQMLHGLNRNNVPNDSGTVFL--TQIVRFLDKPCIAVEY-RTI*IRTSVENSALSRHVSKLNYGLRLVPIFA 669
            P  T     + C  + G + ++ F+A+YL ALG G + P + +  AD+ D  D K  +  SS+FN  YF  +   ++A +VLVW+Q + G   G GV   AMA+ +    +G+ +YR ++P GS  T +  V VA+  K K   P +  +L+  N++   +  G+  L  T+I+ F DK  +  E       ++S         V +L   +RL+PI+A
Sbjct:  121 PGLTPTCSGETCHATAG-QTAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASCRKSKVKIPEDESLLYE-NQDAESSIIGSRKLEHTKILTFFDKAAVETESDNKGAAKSSSWKLCTVTQVEELKALIRLLPIWA 337          
BLAST of DY305541 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.057e-18
Identity = 67/236 (28.39%), Postives = 114/236 (48.31%), Query Frame = 1
Query:   22 PHATCLTDSQNCEESNGFRASLFFLAVYLAALGNGCVTPSMKTRDADKVDLNDPKRSKKLSSYFNAAYFAFSTCELVALTVLVWVQTHSGMYVGFGVSAAAMALGLFSVVSGTLYYRDERPQGSIFTPIAHVFVAAMLKRKKICPSNPQMLHGLNR-NNVPN------DSGTVFLTQIVRFLDKPCIAVEYRTI*IRTSVENSALSRHVSKLNYGLRLVPIFACTHILQRNIG*IN 708
            P     T+ +NCE+++  + ++FF A+Y  A+G G   P++ T  AD+ D+ DPK   +  S+FN   F+     L A TVLV+VQ + G  +G+G+    +A+ +   + GT +YR + P GS FT +A V VA+  K      +N  M H +   + +P+       +  +  T  +RFLD+  +              N   +  V +    LR++P+   T +    +  IN
Sbjct:  127 PPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARVIVASFRK------ANAPMTHDITSFHELPSLEYERKGAFPIHPTPSLRFLDRASLKTG------TNHKWNLCTTTEVEETKQMLRMLPVLFITFVPSMMLAQIN 350          
BLAST of DY305541 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.804e-18
Identity = 57/182 (31.32%), Postives = 95/182 (52.20%), Query Frame = 1
Query:   28 ATCLTDSQNCEESNGFRASLFFLAVYLAALGNGCVTPSMKTRDADKVDLNDPKRSKKLSSYFNAAYFAFSTCELVALTVLVWVQTHSGMYVGFGVSAAAMALGLFSVVSGTLYYRDERPQGSIFTPIAHVFVAAMLKRKKICPSNPQMLHGL-NRNNVPNDSGTVFLTQIVRFLDKPCIAVE 570
            A C+ D   C  +   + ++FF  +YL ALG G + P + +  AD+ D  D +   + +S+FN  YF+ +   LV+ ++LVW+Q + G  +GFG+    M L + S   GT  YR ++P GS  T I+ V VA+  K     P +  +L+   ++N+    S  +  T   ++LDK  +  E
Sbjct:  142 AECIGDF--CPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQVVVASFRKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVISE 321          
BLAST of DY305541 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.248e-18
Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 1
Query:   49 QNCEESNGFRASLFFLAVYLAALGNGCVTPSMKTRDADKVDLNDPKRSKKLSSYFNAAYFAFSTCELVALTVLVWVQTHSGMYVGFGVSAAAMALGLFSVVSGTLYYRDERPQGSIFTPIAHVFVAAMLKRKKICPSNPQMLHGL 483
            +NCE+++  + ++FF A+Y  A+G G   P++ T  AD+ D  DPK      S+FN   F+       A TVLV+VQ + G  +G+G+S   +A  +F  + GT  YR + P GS FT +A V VA++ K ++   S+    + L
Sbjct:  136 ENCEKASVIQLAVFFGALYTLAIGTGGTKPNISTIGADQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVGWAIGYGLSTLGLAFSIFIFLLGTRLYRHKLPMGSPFTKMARVIVASLRKAREPMSSDSTRFYEL 280          
BLAST of DY305541 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 50/171 (29.24%), Postives = 80/171 (46.78%), Query Frame = 1
Query:   52 NCEESNGFRASLFFLAVYLAALGNGCVTPSMKTRDADKVDLND-PKRSKKLSSYFNAAYFAFSTCELVALTVLVWVQTHSGMYVGFGVSAAAMALGLFSVVSGTLYYRDERPQGSIFTPIAHVFVAAMLKRKKICPSNPQMLHGLNRNNVPNDSGTVFLTQIVRFLDKPCI 561
            +C  S   + +L + A  L ++G+G + P      AD++D  + PK  + L S+F   Y + +   L+A T +V++Q H G  +GFGV A  M +     +  +  Y       S+FT +A   VAA  KRK   P +              DS     +Q +RFL+K C+
Sbjct:  132 HCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLYVTRGVTKSLFTGLAQAIVAAYKKRKLSLPDHHDSFDCYYH---MKDSEIKAPSQKLRFLNKACL 299          
The following BLAST results are available for this feature:
BLAST of DY305541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CHL1_ARATH3.883e-2136.91Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR1_ARATH4.293e-2033.50Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH9.563e-2031.05Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3A_ARATH1.057e-1828.39Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2_ARATH1.804e-1831.32Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH5.248e-1835.17Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR2X_ARATH6.638e-1329.24Probable peptide transporter At1g52190 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1BE01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305541 ID=DY305541; Name=DY305541; organism=Citrus sinensis; type=EST; length=953bp
ATCTTCCTTCTCTAAACCCACCCACATGCTACATGTCTAACAGATTCACA
AAACTGTGAAGAATCAAACGGATTTAGGGCCTCCCTATTTTTCCTGGCAG
TGTATTTGGCGGCACTAGGAAATGGGTGTGTTACACCCTCCATGAAAACT
CGGGATGCTGACAAGGTTGATCTTAACGACCCTAAGCGGTCCAAGAAGCT
CTCATCTTACTTTAATGCTGCATATTTTGCCTTCTCCACATGTGAATTGG
TAGCCCTAACTGTTCTTGTTTGGGTACAAACTCACTCCGGCATGTACGTT
GGCTTCGGAGTCTCCGCAGCTGCCATGGCATTGGGCTTGTTCAGCGTGGT
TTCTGGCACACTTTATTACAGAGACGAACGGCCTCAAGGAAGCATTTTCA
CCCCCATAGCTCACGTTTTTGTGGCAGCAATGTTAAAGAGAAAGAAAATT
TGTCCATCTAACCCACAAATGCTTCATGGATTAAATCGAAACAATGTGCC
AAATGACTCTGGAACTGTATTTCTTACACAGATAGTCAGGTTCTTGGATA
AACCTTGCATCGCAGTTGAATATCGAACTATTTAGATAAGAACGTCCGTG
GAGAATAGTGCACTTTCACGTCACGTGAGCAAGTTAAATTACGGATTACG
GCTTGTTCCGATTTTCGCTTGCACTCATATTCTTCAACGGAATATTGGCT
GAATAAACAAACGATGAGCATTCAGGCAGGTGGGTGGCCGGAAACAAGAG
GTCCCCAAANGATTTCATTGTGCCATCATCTGCCCCTTCATCCATTCGCT
TAATAANAACTTGGCATGGAAATTCNATATTGTTAAAAAATTATTGTAAN
TTTACCNTAAAAATAAAAGAAACAANAACCGGGTANCGCACCTATGNACN
CAAAAGATTTGNCTGTTATTTTGGNANNNATTTTNATTGGNNNGNGGGGN
ANN
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