DY305539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305539 vs. ExPASy Swiss-Prot
Match: RFA2_SCHPO (Replication factor A protein 2 OS=Schizosaccharomyces pombe GN=ssb2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.358e-14 Identity = 63/232 (27.16%), Postives = 106/232 (45.69%), Query Frame = 3 Query: 132 LLPMTVKQXXXXXXXXXXXXX-IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTR------------------LRY----SFDEGKSIDQMVLDFLRRPEFLA----------NNNGVHRNVISQQLNLPMDKLMEALESLNKNSLVY-SIDEFHYKSAV 725 L P+T+KQ IDG +V +T VG++ ++ + + I+DGTG IE W H + +++++ YVRVYG++K F K + + +R I D NE+ HF+E I V L+ T+ L Y S S++Q + ++ P + N GVH ++Q + +D L + L + ++Y +IDE H+KS + Sbjct: 50 LRPVTIKQILNASQVHADAEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEVRHWEH----IDALSELATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIAVHLHFTQKANAVNGANAPGYGTSNALGYNNISSNGAANSLEQKLAEYSLTPAQMTVMQAIHSAPETNEGVHVRQLAQSVGPGID-LTAVTDFLQQEGIIYTTIDENHFKSVL 276
BLAST of DY305539 vs. ExPASy Swiss-Prot
Match: RFA2_RAT (Replication protein A 32 kDa subunit OS=Rattus norvegicus GN=Rpa2 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 8.239e-12 Identity = 57/243 (23.46%), Postives = 108/243 (44.44%), Query Frame = 3 Query: 87 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRYSFDEGKS--------------------------IDQMVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNKNSLVYS-IDEFHYKS 719 P PS + K+R + ++P T+ Q I +++ +T+VGI+ + ++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + L ++ G+ + VL+ ++ RPE L +++ SQ ++P+ + +A++ L +YS +D+ H+KS Sbjct: 30 PTPSQAEKKSRARAQHIVPCTISQLLSATLTDEVFK-IGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHLMLSKANSQASVGRPSMSNPGMGEPGNFSGNNFMPANGLTVVQNQVLNLIKACPRPEGLN-----FQDLRSQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFKS 266
BLAST of DY305539 vs. ExPASy Swiss-Prot
Match: RFA2_PONAB (Replication protein A 32 kDa subunit OS=Pongo abelii GN=RPA2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.397e-11 Identity = 55/243 (22.63%), Postives = 109/243 (44.86%), Query Frame = 3 Query: 87 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRYSFDEGKS--------------------------IDQMVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNKNSLVYS-IDEFHYKS 719 P PS + K+R + ++P T+ Q I +++ +T+VGI+ + ++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I + ++ G++ VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H+KS Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVAQNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSVKQAMDFLSNEGHIYSTVDDDHFKS 266
BLAST of DY305539 vs. ExPASy Swiss-Prot
Match: RFA2_HUMAN (Replication protein A 32 kDa subunit OS=Homo sapiens GN=RPA2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.397e-11 Identity = 55/243 (22.63%), Postives = 109/243 (44.86%), Query Frame = 3 Query: 87 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRYSFDEGKS--------------------------IDQMVLDFLR---RPEFLANNNGVHRNVISQQLNLPMDKLMEALESLNKNSLVYS-IDEFHYKS 719 P PS + K+R + ++P T+ Q I +++ +T+VGI+ + ++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I + ++ G++ VL+ ++ RPE L +++ +Q ++ + + +A++ L+ +YS +D+ H+KS Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVAQNQVLNLIKACPRPEGLN-----FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFKS 266 The following BLAST results are available for this feature:
BLAST of DY305539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305539 ID=DY305539; Name=DY305539; organism=Citrus sinensis; type=EST; length=1253bpback to top |