DY305538

Overview
NameDY305538
Unique NameDY305538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 358.607 bits (919), Expect = 3.111e-98
Identity = 175/268 (65.30%), Postives = 207/268 (77.24%), Query Frame = 1
Query:    1 APGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDP-NWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKVLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVKFEYDSNSGLIPFGLEKLPDEDKKVHFRDVAL 801
            +PGKHNFELL+KLVLPDGS LRARLPGRPTRDCLF+DPARD VSLLKIWNMNKYTGVLGVYNCQGAAW+ TERKN FH+T +D++TG IRGRDVH I+EA+TDP  W GDCA+Y    GELI +PYN ++PVSLK+ EHEIFTV+PI  L  G SFAP+GLVNM+N+GGAIEGL+Y  E   K+                      KV MEVKGCGKFG+Y+S KP+RC V+SNE+ FEYDS+SGL+ F L+K+P E+K+ H   V L
Sbjct:  507 SPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFADPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDVHSISEASTDPTTWNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISHLVDGVSFAPIGLVNMYNSGGAIEGLRYEAE---KM----------------------KVVMEVKGCGKFGSYSSVKPKRCVVESNEIAFEYDSSSGLVTFELDKMPIENKRFHLIQVEL 749          
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.901e-71
Identity = 127/262 (48.47%), Postives = 183/262 (69.85%), Query Frame = 1
Query:    4 PGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKVLSPGFSFAPLGLVNMFNAGGAIEG--LKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVKFEYDSNSGLIPFGLEKLPDEDKKVH 783
            PG HNF+LL+KLVLPDGS LRA+LPGRPTRDCLF+DPARD +SLLKIWNMNK+TG++GV+NCQGA W K  +KN  H+T+   +TG IR  D  LI++ A + +W+GD  +Y +R+GE++ LP  A++P++LKVLE+E+F ++P+K ++   SFAP+GLV+MFN+ GAIE   + +V +   +  + +        ++N        VS+ V+GCG+FGAY+S +P +C V+S E  F YD+  GL+   L    +E  + H
Sbjct:  510 PGNHNFDLLRKLVLPDGSVLRAKLPGRPTRDCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRADDADLISQVAGE-DWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITENISFAPIGLVDMFNSSGAIESIDINHVTDKNPEFFDGEISSASPALSDN--RSPTALVSVSVRGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWH 768          
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.156e-60
Identity = 121/267 (45.32%), Postives = 167/267 (62.55%), Query Frame = 1
Query:    4 PGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKVLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASA-KPRRCTVDSNEVKFEYDSNSGLIPFGLEKLPDEDKKVHFRDVAL 801
            PG+H+F LL+KLVL DGS LRA+LPGRPT DC FSDP RD  SLLKIWN+N++TGV+GV+NCQGA W K E++   H+     I+G +R  DVH + + A    WTGD  +Y H  GEL+ LP + ++PV+L   E+E+FTV P+K  S G  FAP+GL+ MFN+GGAI  L+Y  EG   +                       V M+++G G  G Y+S  +PR  TVDS++V++ Y+  SGL+ F    L   +K+++  DV +
Sbjct:  514 PGQHDFNLLRKLVLRDGSILRAKLPGRPTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHYLHKVAAF-EWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGSKFAPVGLMEMFNSGGAIVSLRYDDEGTKFV-----------------------VRMKLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYEPESGLVTF---TLGVPEKELYLWDVVI 753          
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.770e-38
Identity = 91/240 (37.92%), Postives = 125/240 (52.08%), Query Frame = 1
Query:    7 GKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLI-AEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKVLSPG-FSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVKFEYD 720
            G HNF+LLK  VLPDGS LR +    PTRDCLF DP  +  ++LKIWN+NKY GVLG++NCQG  W    R+N      S A+T      D+     +   D       A+Y  +  +L  +  +  + VSL+    E+ TV+P+KV S     FAP+GLVNM N+GGA++ L           E DD                  V + V+GCG+   +AS KP  C +D   V+F+Y+
Sbjct:  561 GNHNFKLLKSFVLPDGSILRCQHYALPTRDCLFEDPLHNGKTMLKIWNLNKYAGVLGLFNCQGGGWCPETRRNKSASEFSHAVTCYASPEDIEWCNGKTPMDIKGVDVFAVYFFKEKKLSLMKCSDRLEVSLEPFSFELMTVSPLKVFSKRLIQFAPIGLVNMLNSGGAVQSL-----------EFDDS--------------ASLVKIGVRGCGELSVFASEKPVCCKIDGVSVEFDYE 775          
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.985e-36
Identity = 90/243 (37.04%), Postives = 134/243 (55.14%), Query Frame = 1
Query:    1 APGKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIK-VLSP--GFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVKFEYD 720
            A G H+F+LL++L LPDG+ LR      PTRDCLF+DP  D  ++LKIWN+NK++GVLG +NCQG  W++  R+N      S  +T +    DV    E +         A+Y     +L  L  + ++ ++L+   +E+  V P++ ++SP  G  FAP+GL NM NAGGA++G     E   K         GD  AE           + VKG G+  AY+SA+PR C V+  + +F+Y+
Sbjct:  544 AVGCHDFDLLRRLALPDGTILRCERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFNCQGGGWSREARRNMCAAGFSVPVTARASPADV----EWSHGGGGGDRFAVYFVEARKLQLLRRDESVELTLEPFTYELLVVAPVRAIVSPELGIGFAPIGLANMLNAGGAVQGF----EAARK--------DGDVAAE-----------VAVKGAGEMVAYSSARPRLCKVNGQDAEFKYE 759          
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.061e-34
Identity = 85/248 (34.27%), Postives = 126/248 (50.81%), Query Frame = 1
Query:    7 GKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTG---DCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKVL-SPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVKFEYDSNSGLI 738
            GKH+F+LLK+LVLP+GS LR      PTRD LF DP  D  ++LKIWN+NKYTGV+G +NCQG  W +  R+N       + +T     +DV     + + P       + A++  ++ +L+    N  + ++L+  + E+ TV+P+  +      FAP+GLVNM N  GAI  L Y  E                            V + V G G+F  YAS KP  C +D   V+F Y+ +  ++
Sbjct:  548 GKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEW--NSGSSPISIANVEEFALFLSQSKKLLLSGLNDDLELTLEPFKFELITVSPVVTIEGNSVRFAPIGLVNMLNTSGAIRSLVYNDE---------------------------SVEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMV 766          
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 9.543e-31
Identity = 76/249 (30.52%), Postives = 132/249 (53.01%), Query Frame = 1
Query:   13 HNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAE---AATDPNWTGDCAIYCHRTGELITLPYNA-AMPVSLKVLEHEIFTVTPI-KVLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVKFEYDSNSGLIPF 744
            HNF+L+KKL   DG+  R      PTRD LF +P  D+ S+LKI+N NK+ GV+G +NCQGA W+  E +   ++     ++G +   D+        A +   +TGD  +Y  ++ E++ +   + AM ++L+    ++ +  P+ +++S G  F PLGL+NMFN  G ++ +K                 GD             + ++VKG G+F AY+S+ P +C ++  E +F+++  +G + F
Sbjct:  636 HNFDLIKKLAFFDGTIPRCVHYALPTRDSLFKNPLFDKESILKIFNFNKFGGVIGTFNCQGAGWSPEEHRFKGYKECYTTVSGTVHVSDIEWDQNPEAAGSQVTYTGDYLVYKQQSEEILFMNSKSEAMKITLEPSAFDLLSFVPVTELVSSGVRFVPLGLINMFNCVGTVQDMKVT---------------GD-----------NSIRVDVKGEGRFMAYSSSAPVKCYLNDKEAEFKWEEETGKLSF 858          
BLAST of DY305538 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.185e-30
Identity = 82/265 (30.94%), Postives = 128/265 (48.30%), Query Frame = 1
Query:    7 GKHNFELLKKLVLPDGSTLRARLPGRPTRDCLFSDPARDRVSLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDP-NWTGDCAIYCHRTGELITLPYNA-AMPVSLKVLEHEIFTVTPIKVLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDXRAENCXNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVKFEYDSNSGL---IPFGLEKLPDEDKKVHF 786
            G H+F+L+KKLV PDG+  +      PTRDCLF +P  D  ++LKIWN NKY GV+G +NCQGA W+   +K          I G +   +V    +  T       +  +Y ++  EL  +   +  +  +++    E+++  P+  L  G  FAP+GL NMFN+GG +  L+YV  G                             ++VKG G F AY+S  P++  ++  EV FE+  +  L   +P+  E     D ++ F
Sbjct:  616 GSHDFDLIKKLVFPDGTIPKCIYFPLPTRDCLFKNPLFDHTTVLKIWNFNKYGGVIGAFNCQGAGWDPIMQKFRGFPECYKPIPGTVHVTEVEWDQKEETSHLGKAEEYVVYLNQAEELSLMTLKSEPIQFTIQPSTFELYSFVPVTKLCGGIKFAPIGLTNMFNSGGTVIDLEYVGNG---------------------------AKIKVKGGGSFLAYSSESPKKFQLNGCEVDFEWLGDGKLCVNVPWIEEACGVSDMEIFF 853          
The following BLAST results are available for this feature:
BLAST of DY305538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS6_ARATH3.111e-9865.30Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH1.901e-7148.47Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH1.156e-6045.32Probable galactinol--sucrose galactosyltransferase... [more]
RFS_PEA2.770e-3837.92Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS_ORYSJ1.985e-3637.04Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
RFS5_ARATH7.061e-3434.27Probable galactinol--sucrose galactosyltransferase... [more]
RFS4_ARATH9.543e-3130.52Probable galactinol--sucrose galactosyltransferase... [more]
STSYN_PEA6.185e-3030.94Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1BD10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305538 ID=DY305538; Name=DY305538; organism=Citrus sinensis; type=EST; length=974bp
GCGCCCGGGAAACACAACTTTGAGCTGCTAAAGAAATTAGTGCTGCCTGA
TGGGTCAACTCTTCGAGCACGCTTGCCTGGGCGGCCCACACGCGATTGCC
TCTTCTCGGACCCAGCCCGTGATCGTGTCAGCTTGTTGAAGATATGGAAC
ATGAACAAGTACACAGGGGTGCTGGGTGTTTACAATTGCCAAGGAGCGGC
TTGGAACAAAACTGAGAGGAAGAACACGTTCCACGAAACCACAAGTGATG
CAATAACAGGGCAAATTAGGGGCCGTGATGTTCACCTCATTGCTGAAGCT
GCCACGGACCCCAATTGGACCGGTGACTGCGCCATCTACTGTCACCGGAC
CGGTGAACTCATCACCCTGCCGTACAATGCAGCAATGCCAGTGTCCCTTA
AAGTCCTTGAACATGAAATCTTCACTGTCACACCCATTAAGGTTTTATCC
CCCGGCTTTAGCTTTGCGCCCTTGGGGCTCGTCAACATGTTCAATGCTGG
TGGTGCTATTGAGGGGCTCAAATATGTAGTTGAAGGCGGCGCTAAGTTAA
CGGAGATTGATGATGGGTATGGAGGTGATCANAGAGCGGAGAATTGTANC
AATGAATTGGTGGGGAAGGTCAGCATGGAGGTTAAAGGTTGTGGCAAGTT
CGGTGCTTATGCATCAGCTAAGCCAAGAAGGTGCACTGTGGATTCAAATG
AGGTCAAATTTGAGTACGATTCAAATTCTGGGCTAATCCCATTCGGCTTG
GAGAAATTGCCCGACGAGGATAAGAAAGTTCATTTCCGGGATGTTGCGTT
ATAAATCATCAATATGTTCACTTTATTCTAAAAATTATAATTTTGTATAA
CGGGGGGGTCGGTGTTGTGAAGGAAACAAACCAAATCTCCCTCCAAAACA
AGAAATCTTTTTCATTTCGAATTTTAATTTAATAAAAAAAAATTAATTAA
ATTTTTTTTCGCCCCTTTCTTTTT
back to top