EY702564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.384e-15 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 500 TIWIGDLFHWMDETFLHNCFSHTGQVVNVKVIRNKQTGQSE--GYGFVEFYSRAAAEKVLQSYSGSLMPNTDQPFRLSWATFSGSDRRTEAWSD--LSIFVG 793 T+W+GDL WMD TF+ ++ + VNVKV+R+K + Y FV+F S AAAE+ L Y+ +++P F+L+WAT G D SIFVG Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVG 187 HSP 2 Score: 27.335 bits (59), Expect = 1.384e-15 Identity = 14/27 (51.85%), Postives = 15/27 (55.56%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL P DS L TF S YPS A+ Sbjct: 187 GDLLPTTEDSDLFMTFRSIYPSCTSAK 213
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.030e-15 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 500 TIWIGDLFHWMDETFLHNCFSHTGQ-VVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTD--QPFRLSWATFSGSDRRTEAWSDLSIFVG 793 ++W+GDL +MDE F+ F+ G+ V++VK+IRN+ TG GY FVEF A AEK L +G +P + F+L++AT+ ++ + + S+FVG Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVG 101 HSP 2 Score: 33.113 bits (74), Expect = 4.030e-15 Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL PDV D +L E F YPS +G + Sbjct: 101 GDLTPDVDDGMLYEFFVKVYPSCRGGK 127
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 4.030e-15 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 500 TIWIGDLFHWMDETFLHNCFSHTGQ-VVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTD--QPFRLSWATFSGSDRRTEAWSDLSIFVG 793 ++W+GDL +MDE F+ F+ G+ V++VK+IRN+ TG GY FVEF A AEK L +G +P + F+L++AT+ ++ + + S+FVG Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVG 101 HSP 2 Score: 33.113 bits (74), Expect = 4.030e-15 Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL PDV D +L E F YPS +G + Sbjct: 101 GDLTPDVDDGMLYEFFVKVYPSCRGGK 127
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.030e-15 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 500 TIWIGDLFHWMDETFLHNCFSHTGQ-VVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTD--QPFRLSWATFSGSDRRTEAWSDLSIFVG 793 ++W+GDL +MDE F+ F+ G+ V++VK+IRN+ TG GY FVEF A AEK L +G +P + F+L++AT+ ++ + + S+FVG Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVG 101 HSP 2 Score: 33.113 bits (74), Expect = 4.030e-15 Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL PDV D +L E F YPS +G + Sbjct: 101 GDLTPDVDDGMLYEFFVKVYPSCRGGK 127
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.030e-15 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 500 TIWIGDLFHWMDETFLHNCFSHTGQ-VVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTD--QPFRLSWATFSGSDRRTEAWSDLSIFVG 793 ++W+GDL +MDE F+ F+ G+ V++VK+IRN+ TG GY FVEF A AEK L +G +P + F+L++AT+ ++ + + S+FVG Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVG 101 HSP 2 Score: 33.113 bits (74), Expect = 4.030e-15 Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL PDV D +L E F YPS +G + Sbjct: 101 GDLTPDVDDGMLYEFFVKVYPSCRGGK 127
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 6.709e-15 Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 461 NGSNNNFTNDET----KTIWIGDLFHWMDETFLHNCFSHTGQVVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTDQPFRLSWATFSG-SDRRTEAWSDLSIFVGRFGSRCN 814 N SN + DE T+W+G+L W+ E F+ ++ G+ V VK+IRN+ TG + GY FVEF S A + S + +P T+ F+L+WA+ G ++ S+ SIFVG N Sbjct: 77 NTSNYGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVN 198 HSP 2 Score: 26.5646 bits (57), Expect = 6.709e-15 Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL+P+V + + F+S+Y S K A+ Sbjct: 191 GDLSPNVNEFDVYSLFASRYNSCKSAK 217
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.815e-15 Identity = 38/101 (37.62%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 500 TIWIGDLFHWMDETFLHNCFSHTGQVV-NVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTDQP--FRLSWATFSGSDRRTEAWSDLSIFVG 793 ++W+GDL +MDE F+ FS G+ VK+I ++ TG S GY FVE A+ ++ +Q +G L+P ++ P F+L++AT+ +R E + S+FVG Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVG 104 HSP 2 Score: 29.261 bits (64), Expect = 8.815e-15 Identity = 13/27 (48.15%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL +V D L + F K+PS KGA+ Sbjct: 104 GDLTSEVDDYQLHQFFLKKFPSCKGAK 130
BLAST of EY702564 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.149e-14 Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 500 TIWIGDLFHWMDETFLHNCFSHTGQ-VVNVKVIRNKQTGQSEGYGFVEFYSRAAAEKVLQSYSGSLMPNTD--QPFRLSWATFSGSDRRTEAWSDLSIFVG 793 ++W+GDL +MDE F+ F+ G+ V++VK+IRN+ TG GY FVEF A AEK L +G +P + F+L++ T+ ++ + + S+FVG Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVG 101 HSP 2 Score: 33.113 bits (74), Expect = 1.149e-14 Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 792 GDLAPDVTDSILQETFSSKYPSVKGAR 872 GDL PDV D +L E F YPS +G + Sbjct: 101 GDLTPDVDDGMLYEFFVKVYPSCRGGK 127 The following BLAST results are available for this feature:
BLAST of EY702564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702564 ID=EY702564; Name=EY702564; organism=Citrus sinensis; type=EST; length=880bpback to top |