EY702562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.518e-24 Identity = 64/150 (42.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 275 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL 709 MAT +AA FVSRS H L +KA+ + + + +GLRSLN +D LQ+KT SK A NG P+ I+CG G+N++F G EV PWSK G L L GHRVMT++P YDQY+DAWDT +++K+ Sbjct: 1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ-SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMAARGHRVMTVSPRYDQYKDAWDTSVSVEIKI 142 HSP 2 Score: 32.3426 bits (72), Expect = 5.518e-24 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK SK GP G Sbjct: 156 KRGVDRVFVDHPMFLEKVWGKTGSKIYGPRAG 187
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.518e-24 Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 275 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL 709 MA+ A+ FVSRS + + S SQ+ R + H+GLR++N +D LQ +T T + A R + + G S IVCG G+N++F GTEV PWSK G L L GHRVMTI+P YDQY+DAWDT +++K+ Sbjct: 1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK--VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAARGHRVMTISPRYDQYKDAWDTSVAVEVKV 141 HSP 2 Score: 32.3426 bits (72), Expect = 5.518e-24 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK SK GP G Sbjct: 155 KRGVDRVFVDHPMFLEKVWGKTGSKIYGPKAG 186
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.485e-23 Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = 2 Query: 275 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKLETN*KS-RLLPCHK 748 MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D+LQ ++ A K +++ + R+ G IVC G++++F G EV PWSK G L L GHRVMTI P YDQY+DAWDT V+ +K+ ++ R C+K Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-KPVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYK 158 HSP 2 Score: 32.7278 bits (73), Expect = 3.485e-23 Identity = 18/32 (56.25%), Postives = 20/32 (62.50%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FLA+ GK SK GP G Sbjct: 158 KRGVDRVFVDHPIFLAKVVGKTGSKIYGPITG 189
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.723e-22 Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 275 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKLETN*KS-RLLPCHK 748 MAT V AS VS +G +S + +Q+ R + H+GLRS+N++D LQ++ A + + + NG P I+CG G+N++F EV PWSK G L + GHRVMT++P YDQY+DAWDT V+++K+ + ++ R C+K Sbjct: 1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQSRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGNGHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSIETVRFFHCYK 156 HSP 2 Score: 33.113 bits (74), Expect = 3.723e-22 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK SK GP G Sbjct: 156 KRGVDRVFVDHPIFLEKVWGKTKSKIYGPNAG 187
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.575e-19 Identity = 59/149 (39.60%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 275 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL 709 MAT + AS FVS G + Q+ R + H+GLR +N ID LQ++T A K +NG ++ G + IVC G+N++F G EV PW K G L L GHRVMT+ P YDQY+DAWDT V++L++ Sbjct: 1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK------PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKTGGLGDVLGGLPPALAARGHRVMTVCPRYDQYKDAWDTCVVVELQV 142 HSP 2 Score: 30.8018 bits (68), Expect = 1.575e-19 Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLGR 843 +RGVDRV DH FL + GK S GP G+ Sbjct: 156 KRGVDRVFVDHPMFLEKVWGKTGSMLYGPKAGK 188
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.905e-19 Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 413 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKLETN*KS-RLLPCHK 748 D L ++T A + A R G R PSL++ G+N++F G E+APWSK G L L GHRVM ++P YDQY+DAWDT V ++K+ ++ R C+K Sbjct: 44 DALSMRTSACPAPRQQPAARRGGRGGRFPSLVVCATAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGDGYETVRFFHCYK 156 HSP 2 Score: 32.3426 bits (72), Expect = 9.905e-19 Identity = 17/32 (53.12%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL R GK K GP G Sbjct: 156 KRGVDRVFIDHPLFLERVWGKTEEKIYGPDAG 187
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.832e-18 Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 389 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKLETN*KS-RLLPCHK 748 G R+ D L ++T A +Q R G R PSL++ G+N++F G E+APWSK G L L GHRVM ++P YDQY+DAWDT V ++K+ ++ R C+K Sbjct: 34 GARASAAADTLSMRTSARAAPRHQQQARRGGRF---PSLVVCASAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGDGYETVRFFHCYK 151 HSP 2 Score: 31.9574 bits (71), Expect = 2.832e-18 Identity = 17/32 (53.12%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL R GK K GP G Sbjct: 151 KRGVDRVFVDHPLFLERVWGKTEEKIYGPVAG 182
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.079e-16 Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 413 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL-ETN*KSRLLPCHK 748 D + S AT +Q S+ PS+++ G G+N++F G E+APWSK G L L GHRVM I+P YDQY+DAWDT V ++K+ + + R C+K Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYK 157 HSP 2 Score: 31.9574 bits (71), Expect = 9.079e-16 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK K GP G Sbjct: 157 KRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTG 188
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 9.079e-16 Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 413 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL-ETN*KSRLLPCHK 748 D + S AT +Q S+ PS+++ G G+N++F G E+APWSK G L L GHRVM I+P YDQY+DAWDT V ++K+ + + R C+K Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYK 157 HSP 2 Score: 31.9574 bits (71), Expect = 9.079e-16 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK K GP G Sbjct: 157 KRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTG 188
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_ORYGL (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza glaberrima GN=WAXY PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.079e-16 Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 413 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL-ETN*KSRLLPCHK 748 D + S AT +Q S+ PS+++ G G+N++F G E+APWSK G L L GHRVM I+P YDQY+DAWDT V ++K+ + + R C+K Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYK 157 HSP 2 Score: 31.9574 bits (71), Expect = 9.079e-16 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK K GP G Sbjct: 157 KRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTG 188 The following BLAST results are available for this feature:
BLAST of EY702562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702562 ID=EY702562; Name=EY702562; organism=Citrus sinensis; type=EST; length=908bpback to top |