DY305523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 4.638e-53 Identity = 104/150 (69.33%), Postives = 118/150 (78.67%), Query Frame = 3 Query: 141 AAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 590 A+ SKQP + TVD+ SV +RLQ ELM LMM GG G+SAFPE ++IF W GTI G K T++EG Y+LSL F DYPFKPP+VKFET CFHPNVD YGNICLDILQDKWSSAYD RTILLSIQSLLGEPN SPLN+ AA L +N+E Sbjct: 17 ASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGP-GISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQE 165
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.324e-51 Identity = 103/150 (68.67%), Postives = 115/150 (76.67%), Query Frame = 3 Query: 141 AAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 590 AA SKQ TVD+ SV +RLQ ELM LMM G D G+SAFPE ++IF W GTI G K T++EG Y+LSL F DYPFK P+VKFET CFHPNVD YGNICLDILQDKWSSAYD RTILLSIQSLLGEPN SPLN+ AA L +N+E Sbjct: 18 AATGSKQSAPPTKTVDSHSVLKRLQSELMGLMM-GADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQE 166
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.634e-48 Identity = 89/132 (67.42%), Postives = 112/132 (84.85%), Query Frame = 3 Query: 195 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 590 SV++RLQ ELM+LMM G G+SAFP+G++IF WIGTI+G K T+YE + +K+SL+FP DYP+KPP VKFET CFHPNVD GNICLDIL+DKWS Y+ R++L+SIQSLLGEPN ESPLNSYAA+L +N++ Sbjct: 6 SVSKRLQSELMNLMM-GPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQD 136
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.001e-47 Identity = 94/151 (62.25%), Postives = 115/151 (76.16%), Query Frame = 3 Query: 135 ATAAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNK 587 A ++ +S++ S + SV +RLQ+ELM+LMMSG D G+SAFPE +++F WIGTI+G GT+YE L YKLSL FP YP+ P VKF T CFHPNVD +GNICLDIL+DKWS+ YD RTILLS+QSLLGEPN ESPLN YAA L N+ Sbjct: 10 AASSVASRKGQESGTSAARGSVGKRLQQELMTLMMSG-DKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQ 159
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 7.930e-45 Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 3 Query: 135 ATAAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 584 AT+ ++++ V +RLQ+ELM+LMMSG D G+SAFPE +++F W+GTI G GT+YE L YKLSL FP YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YD RTILLSIQSLLGEPN +SPLN++AA L N Sbjct: 10 ATSVTAARKGAEPSGGAARGPVGKRLQQELMTLMMSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 7.930e-45 Identity = 89/150 (59.33%), Postives = 111/150 (74.00%), Query Frame = 3 Query: 135 ATAAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 584 AT+ A++++ V +RLQ+ELM+LMMSG D G+SAFPE +++F W+GTI G GT+YE L YKLSL FP YP+ P VKF T C+HPNVD GNICLDIL++KWS+ YD RTILLSIQSLLGEPN +SPLN++AA L N Sbjct: 10 ATSVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.036e-44 Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 3 Query: 135 ATAAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 584 A + A++++ V +RLQ+ELM+LMMSG D G+SAFPE +++F W+GTI G GT+YE L YKLSL FP YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YD RTILLSIQSLLGEPN +SPLN++AA L N Sbjct: 10 AASVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 3.935e-44 Identity = 83/151 (54.97%), Postives = 115/151 (76.16%), Query Frame = 3 Query: 135 ATAAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNK 587 A ++P + + SV++RLQ+EL +L+MSG D G++AFP+G+++F W+ T++G K T+YE L YKL+L FP DYP+KPP VKF T C+HPNVDQ GNICLDIL++ W+++YD RTILLS+QSLLGEPN SPLN+ AA + +N+ Sbjct: 10 ANQVRQKERPRDMTTSKERHSVSKRLQQELRTLLMSG-DPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQ 159
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.953e-43 Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 3 Query: 198 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 584 V +RLQ+ELM LM SG D G+SAFPE +++F W+GTI G GT+YE L YKLSL FP YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YD RTILLSIQSLLGEPN +SPLN++AA L N Sbjct: 31 VGKRLQQELMILMTSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DY305523 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 2.551e-43 Identity = 89/160 (55.62%), Postives = 112/160 (70.00%), Query Frame = 3 Query: 111 NPTVENLRATAAASSKQPVSSPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 590 N + E SK S D +V++RL KELM+LMM+ + G+SAFP+GE+IF W+GTI G + T+Y G +Y+LSL FP YP+ P VKF T CFHPNVD G ICLDIL+DKWS+ YD RTILLSIQSLLGEPN ESPLN+ AA + N+++ Sbjct: 4 NISPEQSGGAGGGGSKHSDDSMPVKDNHAVSKRLHKELMNLMMAN-ERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK 162 The following BLAST results are available for this feature:
BLAST of DY305523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305523 ID=DY305523; Name=DY305523; organism=Citrus sinensis; type=EST; length=1320bpback to top |